Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 3.7e-101 372.1 275 100.0
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 6.8e-71 271.6 273 78.8
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 3.8e-69 265.8 269 72.1
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 8.4e-69 264.6 272 81.2
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 4.8e-64 248.8 277 74.7
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 1.4e-63 247.3 272 78.7
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 5.3e-63 245.4 270 75.9
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.2e-62 244.2 281 77.2
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 2.0e-62 243.4 270 74.4
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.4e-62 242.7 270 75.6
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 4.4e-62 242.3 283 74.2
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.2e-61 240.0 287 75.6
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 3.8e-61 239.2 270 74.8
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 6.4e-61 238.4 286 74.5
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 6.4e-61 238.4 268 75.7
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 6.4e-61 238.4 270 76.3
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 1.4e-60 237.3 270 76.3
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 1.4e-60 237.3 272 73.9
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 2.4e-60 236.5 272 77.9
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 2.1e-59 233.4 252 63.5
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 2.1e-59 233.4 273 65.9
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.0e-58 231.1 252 79.0
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 2.3e-58 229.9 277 71.8
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 2.3e-58 229.9 276 74.6
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 3.0e-58 229.6 272 76.1
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 3.9e-58 229.2 292 68.5
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 5.1e-58 228.8 279 71.0
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 5.1e-58 228.8 286 73.4
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 5.1e-58 228.8 282 70.2
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 6.6e-58 228.4 270 74.4
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 6.6e-58 228.4 293 68.9
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 8.7e-58 228.0 269 74.7
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 8.7e-58 228.0 269 74.7
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 1.9e-57 226.9 222 86.0
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 2.5e-57 226.5 289 72.3
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 4.3e-57 225.7 283 65.4
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 4.3e-57 225.7 241 82.2
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 5.6e-57 225.3 280 69.6
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 7.3e-57 224.9 272 75.0
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 7.3e-57 224.9 284 69.7
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 1.3e-56 224.2 245 79.6
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 1.3e-56 224.2 274 70.8
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 1.6e-56 223.8 272 73.9
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 2.1e-56 223.4 286 71.3
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.1e-56 223.4 284 68.3
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 2.8e-56 223.0 277 73.6
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 1.1e-55 221.1 256 77.3
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 1.1e-55 221.1 276 73.2
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 1.1e-55 221.1 272 71.7
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 1.4e-55 220.7 281 72.6
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 1.8e-55 220.3 286 70.6
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 2.4e-55 219.9 280 72.5
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 3.1e-55 219.5 281 72.2
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 4.0e-55 219.2 280 71.1
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.0e-55 219.2 280 71.1
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 5.3e-55 218.8 273 72.2
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 5.3e-55 218.8 281 73.0
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 5.3e-55 218.8 280 70.4
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 5.3e-55 218.8 281 71.9
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 6.9e-55 218.4 271 72.0
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 6.9e-55 218.4 281 71.2
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 9.0e-55 218.0 277 61.7
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 1.2e-54 217.6 280 70.4
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 1.5e-54 217.2 316 46.5
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.8e-54 215.3 293 69.3
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.8e-54 215.3 293 69.3
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 7.6e-54 214.9 289 59.9
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 7.6e-54 214.9 280 68.6
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 7.6e-54 214.9 280 68.6
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 1.7e-53 213.8 217 73.7
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 2.2e-53 213.4 287 72.5
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 2.2e-53 213.4 282 72.0
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 3.8e-53 212.6 280 70.4
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 6.4e-53 211.8 271 72.0
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 2.4e-52 209.9 196 87.8
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 5.5e-52 208.8 308 68.2
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 5.5e-52 208.8 282 67.0
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 5.5e-52 208.8 196 85.2
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 9.3e-52 208.0 282 69.5
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.2e-51 207.6 193 80.3
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 2.3e-50 203.4 275 70.2
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 6.7e-50 201.8 255 53.3
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 1.8e-47 193.7 218 66.1
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 1.5e-46 190.7 219 64.8
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 2.6e-46 189.9 365 41.6
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 1.3e-45 187.6 268 59.0
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 2.2e-45 186.8 182 83.0
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 6.0e-43 178.7 272 64.3
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.7e-37 160.6 203 53.2
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 3.8e-37 159.5 85 89.4
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 3.8e-37 159.5 83 89.2
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 3.8e-37 159.5 83 89.2
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 7.2e-36 155.2 85 85.9
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 9.3e-36 154.8 85 87.1
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.7e-35 153.3 85 87.1
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 5.1e-34 149.1 84 84.5
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 5.1e-34 149.1 84 84.5
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 1.7e-29 134.0 194 53.6
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 2.5e-28 130.2 238 42.4
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 2.3e-26 123.6 214 72.4
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 2.0e-25 120.6 236 56.8
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 1.3e-21 107.8 190 74.2
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 2.7e-19 100.1 103 56.3
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 1.4e-18 97.8 142 56.3
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 5.1e-18 95.9 121 52.9
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 4.8e-16 89.4 72 66.7
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 3.1e-15 86.7 69 63.8
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.6e-14 83.6 188 48.9
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 2.2e-13 80.5 45 86.7
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 5.5e-12 75.9 66 63.6
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 3.0e-10 70.1 43 72.1
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 7.5e-09 65.5 54 63.0
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.2e-08 63.9 85 50.6


User provided reference genes

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