Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.4e-165 586.3 309 100.0
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 6.7e-83 311.6 309 58.6
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 3.6e-76 289.3 313 56.9
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.2e-71 274.2 312 54.5
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 8.0e-68 261.5 323 52.0
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 3.7e-65 252.7 316 51.3
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 2.2e-62 243.4 322 46.9
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.5e-61 240.7 314 47.5
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 1.2e-60 237.7 320 49.1
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.7e-60 236.5 320 49.7
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.4e-59 234.2 322 46.6
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.8e-59 233.8 315 47.9
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 6.8e-59 231.9 314 46.8
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 6.8e-59 231.9 318 47.8
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 6.8e-59 231.9 313 50.8
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.2e-58 231.1 229 56.3
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 1.5e-58 230.7 318 48.1
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 2.0e-58 230.3 312 48.7
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 4.4e-58 229.2 233 55.4
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 5.7e-58 228.8 322 49.7
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 7.5e-58 228.4 320 45.6
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.3e-57 227.6 314 49.0
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.3e-57 227.6 319 47.0
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 2.2e-57 226.9 315 49.2
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 2.2e-57 226.9 316 47.2
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 2.8e-57 226.5 317 47.9
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 2.8e-57 226.5 259 54.4
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 4.8e-57 225.7 314 49.0
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 4.8e-57 225.7 318 47.2
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 8.3e-57 224.9 311 48.6
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.1e-56 224.6 323 45.5
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 3.1e-56 223.0 316 45.3
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 4.1e-56 222.6 262 51.5
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 7.0e-56 221.9 316 46.2
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.2e-55 221.1 332 44.0
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 1.2e-55 221.1 325 48.9
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 4.5e-55 219.2 326 44.8
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 4.5e-55 219.2 398 40.5
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 7.7e-55 218.4 238 54.2
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.7e-54 217.2 265 50.6
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.9e-54 216.5 254 52.8
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 2.9e-54 216.5 310 46.1
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.1e-53 214.5 328 45.4
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.9e-53 213.8 321 44.5
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 9.4e-53 211.5 332 44.6
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 9.4e-53 211.5 307 45.9
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.6e-52 210.7 320 43.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 3.6e-52 209.5 317 45.7
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 6.1e-52 208.8 261 49.0
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 8.0e-52 208.4 312 43.3
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 8.0e-52 208.4 306 43.1
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.4e-51 207.6 296 45.9
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.3e-51 206.8 320 46.9
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 3.0e-51 206.5 295 45.8
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 3.0e-51 206.5 320 42.8
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 5.2e-51 205.7 222 53.2
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.2e-50 204.5 295 45.1
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.5e-50 204.1 316 45.6
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.6e-50 203.4 315 44.8
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 3.4e-50 203.0 265 47.9
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 9.8e-50 201.4 261 49.0
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 9.8e-50 201.4 260 46.5
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.7e-49 200.7 321 43.9
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.7e-49 200.7 269 45.7
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 2.2e-49 200.3 300 44.3
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 2.8e-49 199.9 317 42.9
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 3.7e-49 199.5 375 39.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 8.3e-49 198.4 229 51.1
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.1e-48 198.0 226 53.1
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 1.4e-48 197.6 257 47.1
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.8e-48 197.2 265 48.7
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 3.1e-48 196.4 317 42.3
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 3.1e-48 196.4 321 41.1
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 5.4e-48 195.7 317 42.3
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.4e-48 195.7 295 43.4
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 5.4e-48 195.7 312 45.2
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 2.0e-47 193.7 317 41.3
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 3.5e-47 193.0 363 39.7
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.0e-46 191.4 302 43.4
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 2.3e-46 190.3 313 42.8
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.3e-46 190.3 266 43.6
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 2.9e-46 189.9 240 46.7
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.8e-46 189.5 302 44.0
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.5e-45 186.8 209 55.5
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 2.5e-45 186.8 294 44.6
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 2.5e-45 186.8 249 47.4
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 4.3e-45 186.0 316 40.5
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 2.8e-44 183.3 224 48.7
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 8.0e-44 181.8 348 37.9
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.4e-43 181.0 205 55.6
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 3.0e-43 179.9 226 49.1
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.2e-43 179.1 217 50.7
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.2e-43 179.1 204 51.5
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 6.8e-43 178.7 219 49.3
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 1.2e-39 167.9 259 42.9
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.9e-37 160.6 390 32.8
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 6.8e-35 152.1 303 37.6
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.2e-34 151.4 188 49.5
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.2e-33 147.1 315 38.1
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 3.5e-23 113.2 224 36.6
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 5.6e-21 105.9 150 46.0
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 3.6e-20 103.2 203 34.0
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.8e-19 100.9 222 34.2
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.8e-19 100.9 230 38.7
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.9e-17 93.6 141 45.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-16 91.7 119 50.4
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 1.7e-14 84.3 139 41.7
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.6e-14 82.0 120 45.0
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.9e-13 80.9 161 41.6
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.5e-13 80.5 74 58.1
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 3.3e-13 80.1 174 36.8
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.0e-11 73.2 91 44.0
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.6e-10 70.5 133 33.8
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 3.8e-09 66.6 97 39.2
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.9e-08 64.3 117 34.2
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.3e-08 62.0 136 40.4
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.3e-08 62.0 38 73.7
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.6e-07 59.7 52 53.8


User provided reference genes

Program Settings