Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 1.6e-160 569.3 284 100.0
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 4.4e-113 411.8 282 77.0
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 7.5e-113 411.0 276 78.3
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 3.7e-112 408.7 277 77.6
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 7.0e-95 351.3 253 72.7
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 5.9e-94 348.2 278 66.2
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 2.3e-93 346.3 276 67.4
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 3.9e-93 345.5 265 68.7
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 8.6e-93 344.4 281 67.6
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.9e-92 343.2 278 65.1
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 2.5e-92 342.8 280 65.0
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 3.3e-92 342.4 271 66.1
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 3.3e-92 342.4 270 66.3
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 5.6e-92 341.7 273 67.0
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 7.3e-92 341.3 256 69.9
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 1.6e-91 340.1 274 66.4
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 1.0e-90 337.4 283 66.1
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 2.3e-90 336.3 267 66.7
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 2.3e-90 336.3 273 66.7
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 3.1e-90 335.9 277 66.8
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 8.9e-90 334.3 255 67.1
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 1.2e-89 334.0 273 66.3
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 1.5e-89 333.6 278 64.7
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 2.6e-89 332.8 280 66.8
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 5.8e-89 331.6 276 65.6
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 9.8e-89 330.9 262 66.8
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 1.7e-88 330.1 273 65.2
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 1.7e-88 330.1 275 66.9
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 2.2e-88 329.7 197 80.7
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 6.4e-88 328.2 277 65.7
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 8.3e-88 327.8 277 64.3
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 8.3e-88 327.8 253 67.2
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 1.1e-87 327.4 213 77.0
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.9e-87 326.6 215 76.7
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 2.4e-87 326.2 277 65.3
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 7.0e-87 324.7 226 71.7
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 9.2e-87 324.3 280 62.9
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.6e-86 323.6 230 71.7
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.6e-86 323.6 230 71.7
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 1.6e-86 323.6 242 69.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.0e-86 323.2 277 64.3
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 2.0e-86 323.2 242 68.2
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.0e-86 323.2 277 65.0
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 2.0e-86 323.2 278 63.3
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 3.5e-86 322.4 266 63.5
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 3.5e-86 322.4 251 68.5
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 3.5e-86 322.4 277 64.6
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 4.6e-86 322.0 276 64.5
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 7.8e-86 321.2 252 68.3
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 7.8e-86 321.2 195 79.0
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 1.0e-85 320.9 205 77.1
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 1.0e-85 320.9 273 63.4
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 2.3e-85 319.7 278 61.2
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 2.3e-85 319.7 242 66.9
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 5.0e-85 318.5 200 78.5
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 5.0e-85 318.5 195 79.0
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 6.6e-85 318.2 195 79.0
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 1.1e-84 317.4 263 63.5
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 1.9e-84 316.6 277 62.1
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 2.5e-84 316.2 277 61.0
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 4.3e-84 315.5 195 77.9
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 1.1e-82 310.8 200 75.0
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 1.8e-82 310.1 248 66.1
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 2.3e-82 309.7 199 76.9
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 5.2e-82 308.5 246 65.0
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 5.2e-82 308.5 255 65.9
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 1.5e-81 307.0 232 66.8
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.6e-81 306.2 200 74.5
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 4.4e-81 305.4 227 68.3
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.2e-80 303.1 200 74.5
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 4.9e-80 302.0 200 73.5
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 4.9e-80 302.0 254 63.4
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 6.4e-80 301.6 236 66.5
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 8.3e-80 301.2 206 70.9
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 1.1e-79 300.8 239 64.4
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.1e-79 300.8 216 68.1
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.1e-79 300.8 251 64.1
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 1.9e-79 300.1 200 73.0
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 1.9e-79 300.1 200 73.0
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 2.4e-79 299.7 245 63.7
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 1.6e-78 297.0 226 65.9
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 3.5e-78 295.8 222 66.2
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 1.0e-77 294.3 294 56.5
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.7e-77 293.5 284 58.1
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 2.3e-77 293.1 242 64.5
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 5.1e-77 292.0 248 61.7
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 6.6e-77 291.6 209 68.9
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.5e-76 290.4 227 67.8
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 7.3e-76 288.1 184 77.2
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 7.6e-73 278.1 174 80.5
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.4e-71 273.1 175 74.9
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 7.1e-71 271.6 198 65.7
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 1.2e-65 254.2 179 68.7
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 2.0e-65 253.4 256 57.8
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 5.8e-65 251.9 209 58.4
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 7.6e-65 251.5 195 64.1
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.9e-63 246.9 206 59.2
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 7.8e-62 241.5 276 52.5
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 1.7e-61 240.4 278 52.9
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.2e-57 227.6 218 60.1
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 6.4e-56 221.9 186 58.1
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 1.9e-55 220.3 142 74.6
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 7.1e-55 218.4 142 72.5
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.6e-54 217.2 142 72.5
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 6.0e-54 215.3 248 51.6
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 3.2e-47 193.0 193 50.8
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 5.5e-47 192.2 306 44.1
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 9.6e-44 181.4 214 47.2
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 1.3e-40 171.0 212 47.2
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 8.2e-35 151.8 113 64.6
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 7.4e-28 128.6 144 52.8
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 5.5e-23 112.5 109 56.0
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 1.2e-22 111.3 107 56.1
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 7.4e-20 102.1 138 50.0
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 7.4e-20 102.1 74 64.9
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 7.7e-17 92.0 64 71.9
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 1.4e-15 87.8 147 38.1
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.4e-13 81.3 150 32.7
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 1.4e-13 81.3 66 60.6
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 9.1e-10 68.6 107 37.4
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 7.2e-07 58.9 38 71.1


User provided reference genes

Program Settings