Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 3.0e-171 605.1 312 100.0
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 5.3e-96 355.1 229 81.7
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 3.5e-95 352.4 228 81.1
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.9e-93 346.7 227 81.5
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 4.8e-89 332.0 228 77.2
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 4.5e-87 325.5 226 77.0
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 4.9e-81 305.4 247 66.0
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 1.8e-80 303.5 249 67.9
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 4.1e-80 302.4 231 68.4
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 2.0e-79 300.1 227 70.5
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 3.5e-79 299.3 229 70.3
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 4.5e-79 298.9 227 68.3
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 7.8e-79 298.1 228 71.1
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.0e-78 297.7 227 68.3
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 2.3e-78 296.6 227 70.0
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.9e-77 293.5 251 65.7
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 5.6e-77 292.0 245 66.1
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 1.0e-75 287.7 234 64.1
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 4.0e-75 285.8 215 68.8
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.7e-73 279.3 247 61.9
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 3.7e-73 279.3 229 69.9
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.6e-71 273.9 234 63.7
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.6e-71 273.9 228 65.8
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 2.7e-71 273.1 253 62.5
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.9e-71 271.9 238 63.9
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 5.9e-71 271.9 248 60.9
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 7.8e-71 271.6 234 66.2
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.7e-70 270.4 224 67.0
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 2.3e-70 270.0 231 63.6
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 5.0e-70 268.9 236 64.8
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 8.6e-70 268.1 224 66.1
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.1e-69 267.7 217 67.7
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 1.5e-69 267.3 228 65.8
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.5e-69 267.3 231 64.5
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.9e-69 266.9 228 64.5
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 1.9e-69 266.9 228 65.8
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 2.5e-69 266.5 220 66.4
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 3.3e-69 266.2 237 64.1
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.3e-69 266.2 229 63.3
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.2e-68 264.2 217 68.2
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.6e-68 262.7 232 62.9
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 3.6e-68 262.7 224 65.2
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 6.2e-68 261.9 232 62.5
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 1.0e-67 261.2 241 63.9
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 1.0e-67 261.2 230 63.5
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 1.0e-67 261.2 231 63.6
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 1.4e-67 260.8 238 60.5
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 2.3e-67 260.0 228 64.9
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 2.3e-67 260.0 214 65.0
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 3.1e-67 259.6 223 66.4
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 5.2e-67 258.8 227 64.8
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 5.2e-67 258.8 236 59.7
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 6.8e-67 258.5 233 63.5
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 1.5e-66 257.3 230 62.6
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 3.4e-66 256.1 221 64.3
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 4.4e-66 255.8 230 63.0
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 4.4e-66 255.8 228 63.2
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 7.5e-66 255.0 250 60.4
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 7.5e-66 255.0 229 61.6
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 9.8e-66 254.6 218 62.8
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 2.9e-65 253.1 228 62.3
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 2.9e-65 253.1 233 61.4
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 6.4e-65 251.9 237 58.6
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 6.4e-65 251.9 227 64.8
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 8.3e-65 251.5 236 58.9
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 1.9e-64 250.4 250 57.6
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 2.4e-64 250.0 234 60.3
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.1e-64 249.2 228 61.8
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 5.4e-64 248.8 223 63.7
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 5.4e-64 248.8 226 61.1
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.0e-62 244.6 231 61.5
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.0e-62 244.6 179 74.3
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 1.0e-62 244.6 229 61.1
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 3.0e-62 243.0 220 62.7
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 8.6e-62 241.5 230 60.4
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.5e-61 240.7 218 63.3
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 2.1e-60 236.9 249 56.6
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 2.1e-60 236.9 239 57.7
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 6.2e-60 235.3 227 59.0
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 6.2e-60 235.3 227 59.0
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 1.8e-59 233.8 218 61.0
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 2.3e-59 233.4 220 60.5
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 9.8e-58 228.0 218 58.7
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.9e-57 226.5 226 57.1
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 4.9e-57 225.7 244 56.6
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.1e-56 224.6 218 60.6
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 1.9e-56 223.8 263 50.2
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 4.6e-55 219.2 231 51.9
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 6.0e-55 218.8 239 52.7
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.3e-54 216.9 242 50.8
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.3e-54 216.9 236 52.5
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 3.0e-54 216.5 241 51.9
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.0e-54 216.5 237 51.9
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 3.9e-54 216.1 223 53.4
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 5.1e-54 215.7 243 51.9
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 2.5e-53 213.4 229 50.7
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 5.6e-53 212.2 242 50.4
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 1.6e-52 210.7 253 49.0
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 3.1e-51 206.5 236 50.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 3.1e-51 206.5 236 50.8
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 4.0e-51 206.1 218 54.6
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 8.9e-51 204.9 242 50.0
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.2e-50 204.5 159 67.9
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 1.1e-48 198.0 242 48.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 6.0e-47 192.2 216 50.0
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 8.6e-46 188.3 243 47.3
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 8.6e-46 188.3 237 46.4
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 3.3e-45 186.4 236 45.8
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.2e-44 184.5 236 45.3
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 1.2e-44 184.5 239 44.4
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.2e-44 184.5 236 45.3
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.8e-43 180.6 242 44.6
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 3.8e-41 172.9 180 56.1
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 2.7e-39 166.8 114 75.4
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 9.0e-35 151.8 146 61.0
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 4.8e-28 129.4 226 41.6
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 2.4e-27 127.1 103 59.2
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 1.0e-22 111.7 126 51.6
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 2.5e-21 107.1 110 56.4
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 3.3e-21 106.7 214 35.0
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 8.2e-20 102.1 161 42.2
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 2.6e-18 97.1 72 72.2
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.5e-16 89.4 56 80.4
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 9.3e-16 88.6 93 53.8
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 4.6e-15 86.3 122 46.7
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 6.0e-15 85.9 149 39.6
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 1.8e-14 84.3 81 53.1
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 2.6e-10 70.5 68 55.9
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 4.5e-10 69.7 61 54.1
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 1.7e-09 67.8 55 63.6
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 2.2e-09 67.4 86 44.2


User provided reference genes

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