Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32747 Striga asiatica HOM05D006324 ORTHO05D007463 1.7e-103 379.4 196 100.0
MSTRG.17017 Avicennia marina HOM05D006324 ORTHO05D007463 5.2e-57 224.9 202 59.9
SalBow6G4289 Salvia bowleyana HOM05D006324 ORTHO05D007463 3.8e-55 218.8 198 58.6
Migut.N01783 Erythranthe guttata HOM05D006324 ORTHO05D007463 3.2e-54 215.7 201 60.2
Migut.O00526 Erythranthe guttata HOM05D006324 ORTHO05D007463 1.3e-52 210.3 199 58.3
Oeu049007.1 Olea europaea HOM05D006324 ORTHO05D007463 6.6e-52 208.0 206 57.3
MSTRG.20569 Avicennia marina HOM05D006324 ORTHO05D007463 1.2e-50 203.8 194 58.8
Nitab4.5_0005981g0020 Nicotiana tabacum HOM05D006324 ORTHO05D007463 2.4e-49 199.5 205 58.0
Nitab4.5_0000707g0250 Nicotiana tabacum HOM05D006324 ORTHO05D007463 2.9e-47 192.6 202 55.9
Potri.001G263800 Populus trichocarpa HOM05D006324 ORTHO05D007463 2.9e-47 192.6 210 51.4
CANSAT80G0022 Cannabis sativa HOM05D006324 ORTHO05D007463 1.9e-46 189.9 206 51.0
MELO3C023574.2 Cucumis melo HOM05D000009 ORTHO05D007463 4.2e-46 188.7 205 54.6
unitig_8.g3776 Utricularia gibba HOM05D006324 ORTHO05D007463 7.1e-46 188.0 196 54.6
PGSC0003DMG401006791 Solanum tuberosum HOM05D006324 ORTHO05D007463 1.2e-45 187.2 209 53.1
CsaV3_7G030870 Cucumis sativus L. HOM05D006324 ORTHO05D007463 2.1e-45 186.4 205 54.1
MD02G1307800 Malus domestica HOM05D006324 ORTHO05D007463 2.7e-45 186.0 206 51.9
Sabra16G0162000 Salix brachista HOM05D006324 ORTHO05D007463 2.7e-45 186.0 209 49.8
Solyc01g087550.3 Solanum lycopersicum HOM05D006324 ORTHO05D007463 2.7e-45 186.0 198 55.1
Sopen01g034520 Solanum pennellii HOM05D006324 ORTHO05D007463 3.5e-45 185.7 197 53.3
Eucgr.G03365 Eucalyptus grandis HOM05D006324 ORTHO05D007463 6.0e-45 184.9 203 52.2
TAR633G2637 Trochodendron aralioides HOM05D006324 ORTHO05D007463 1.0e-44 184.1 209 50.2
CAN.G219.51 Capsicum annuum HOM05D006324 ORTHO05D007463 1.3e-44 183.7 210 52.9
Gorai.008G105500 Gossypium raimondii HOM05D006324 ORTHO05D007463 1.3e-44 183.7 197 54.3
RcHm_v2.0_Chr1g0317051 Rosa chinensis HOM05D006324 ORTHO05D007463 1.3e-44 183.7 206 51.5
Gohir.A12G094300 Gossypium hirsutum HOM05D006324 ORTHO05D007463 1.7e-44 183.3 197 54.8
TWI74G1214 Tripterygium wilfordii HOM05D006324 ORTHO05D007463 1.7e-44 183.3 203 50.2
Cpa.g.sc12.280 Carica papaya HOM05D006324 ORTHO05D007463 3.0e-44 182.6 203 53.7
Prupe.2G017700 Prunus persica HOM05D006324 ORTHO05D007463 3.9e-44 182.2 206 50.0
Dinv43416 Davidia involucrata HOM05D006324 ORTHO05D007463 5.1e-44 181.8 143 64.3
Prupe.2G019000 Prunus persica HOM05D006324 ORTHO05D007463 5.1e-44 181.8 206 50.0
Nn7g36262 Nelumbo nucifera HOM05D006324 ORTHO05D007463 6.6e-44 181.4 209 48.3
Sed0027296 Sechium edule HOM05D006324 ORTHO05D007463 8.7e-44 181.0 205 51.7
CSS0038258 Camellia sinensis var. sinensis HOM05D006324 ORTHO05D007463 1.5e-43 180.3 245 44.5
Dinv09327 Davidia involucrata HOM05D006324 ORTHO05D007463 1.5e-43 180.3 209 51.2
AL6G20110 Arabidopsis lyrata HOM05D006324 ORTHO05D007463 1.9e-43 179.9 193 52.8
AT5G09680 Arabidopsis thaliana HOM05D006324 ORTHO05D007463 1.9e-43 179.9 198 50.0
Gohir.D12G097000 Gossypium hirsutum HOM05D006324 ORTHO05D007463 1.9e-43 179.9 193 54.4
Manes.07G007700 Manihot esculenta HOM05D006324 ORTHO05D007463 1.9e-43 179.9 208 51.4
Duzib133G0472 Durio zibethinus HOM05D006324 ORTHO05D007463 3.3e-43 179.1 207 51.2
PGR031G0767 Punica granatum HOM05D006324 ORTHO05D007463 3.3e-43 179.1 203 53.7
Peaxi162Scf00071g01141 Petunia axillaris HOM05D006324 ORTHO05D007463 5.6e-43 178.3 196 51.5
Cc02_g28340 Coffea canephora HOM05D006324 ORTHO05D007463 7.3e-43 177.9 202 51.5
Thecc.09G178400 Theobroma cacao HOM05D006324 ORTHO05D007463 7.3e-43 177.9 198 52.0
Haze_03172 Corylus avellana HOM05D006324 ORTHO05D007463 9.6e-43 177.6 201 53.2
FvH4_7g01340 Fragaria vesca HOM05D006324 ORTHO05D007463 9.6e-43 177.6 206 51.5
Sc16g0002910 Simmondsia chinensis HOM05D006324 ORTHO05D007463 9.6e-43 177.6 195 54.9
TWI53G0677 Tripterygium wilfordii HOM05D006324 ORTHO05D007463 1.3e-42 177.2 194 51.0
GSVIVG01032154001 Vitis vinifera HOM05D006324 ORTHO05D007463 1.3e-42 177.2 199 52.8
FAN06G0074 Fragaria x ananassa HOM05D006324 ORTHO05D007463 1.6e-42 176.8 205 51.7
MD07G1017800 Malus domestica HOM05D006324 ORTHO05D007463 2.1e-42 176.4 206 49.5
Peaxi162Scf00019g00017 Petunia axillaris HOM05D006324 ORTHO05D007463 2.1e-42 176.4 209 50.2
Hund18591 Selenicereus undatus HOM05D006324 ORTHO05D007463 2.1e-42 176.4 195 50.3
Lj3g0011240 Lotus japonicus HOM05D006324 ORTHO05D007463 3.6e-42 175.6 199 52.3
CiPaw.13G007100 Carya illinoinensis HOM05D006324 ORTHO05D007463 4.8e-42 175.3 205 47.8
Glyma.09G227600 Glycine max HOM05D006324 ORTHO05D007463 4.8e-42 175.3 206 50.0
Glyma.12G009100 Glycine max HOM05D006324 ORTHO05D007463 8.1e-42 174.5 203 52.2
Lj3g0003899 Lotus japonicus HOM05D006324 ORTHO05D007463 1.1e-41 174.1 198 52.5
QL04p008819 Quercus lobata HOM05D006324 ORTHO05D007463 1.8e-41 173.3 203 50.7
Rhsim07G0057200 Rhododendron simsii HOM05D006324 ORTHO05D007463 2.4e-41 172.9 159 57.9
AUR62009399 Chenopodium quinoa HOM05D006324 ORTHO05D007463 4.0e-41 172.2 192 50.5
Lj9C638G12 Lonicera japonica HOM05D006324 ORTHO05D007463 6.9e-41 171.4 239 45.6
HanXRQChr12g0357631 Helianthus annuus HOM05D006324 ORTHO05D007463 9.0e-41 171.0 195 50.3
Lalb_Chr01g0000431 Lupinus albus HOM05D006324 ORTHO05D007463 9.0e-41 171.0 209 47.4
FAN01G1980 Fragaria x ananassa HOM05D006324 ORTHO05D007463 1.2e-40 170.6 204 48.5
FAN03G2871 Fragaria x ananassa HOM05D006324 ORTHO05D007463 1.2e-40 170.6 206 50.5
vmacro13685 Vaccinium macrocarpon HOM05D006324 ORTHO05D007463 1.2e-40 170.6 187 51.9
VMungo0464G1625 Vigna mungo HOM05D006324 ORTHO05D007463 1.2e-40 170.6 204 49.0
AUR62023082 Chenopodium quinoa HOM05D006324 ORTHO05D007463 1.5e-40 170.2 192 49.5
COL.COLO4_24418 Corchorus olitorius HOM05D006324 ORTHO05D007463 3.4e-40 169.1 129 66.7
Ca_14667_v3 Cicer arietinum L. HOM05D006324 ORTHO05D007463 2.9e-39 166.0 198 50.0
Lsat_1_v5_gn_1_105261 Lactuca sativa HOM05D006324 ORTHO05D007463 3.8e-39 165.6 143 60.1
Phvul.004G011500 Phaseolus vulgaris HOM05D006324 ORTHO05D007463 3.8e-39 165.6 201 48.8
Lj9C636G13 Lonicera japonica HOM05D006324 ORTHO05D007463 4.9e-39 165.2 223 48.4
Sp6g33690 Schrenkiella parvula HOM05D006324 ORTHO05D007463 4.9e-39 165.2 200 48.5
Ciclev10032828m.g Citrus clementina HOM05D006324 ORTHO05D007463 8.4e-39 164.5 136 61.8
ECA248G0404 Erigeron canadensis HOM05D000636 ORTHO05D002338 8.4e-39 164.5 200 49.5
arahy.Tifrunner.gnm1.ann1.Q955DD Arachis hypogaea HOM05D006324 ORTHO05D007463 1.4e-38 163.7 200 48.0
CiPaw.14G001800 Carya illinoinensis HOM05D006324 ORTHO05D007463 1.4e-38 163.7 204 48.5
arahy.Tifrunner.gnm1.ann1.N2H6V0 Arachis hypogaea HOM05D006324 ORTHO05D007463 1.9e-38 163.3 200 47.5
Atru.chr11.2585 Acer truncatum HOM05D006324 ORTHO05D007463 2.4e-38 162.9 196 48.0
Ah.10g038740 Amaranthus hybridus HOM05D006324 ORTHO05D007463 2.4e-38 162.9 199 49.7
Carub.0008s1534 Capsella rubella HOM05D006324 ORTHO05D007463 3.2e-38 162.5 192 51.0
Hma1.2p1_1328F.1_g275960 Hydrangea macrophylla HOM05D006324 ORTHO05D007463 4.2e-38 162.2 222 45.0
Carub.0004s0655 Capsella rubella HOM05D006324 ORTHO05D007463 7.1e-38 161.4 192 49.0
EL10Ac2g04346 Beta vulgaris HOM05D006324 ORTHO05D007463 9.3e-38 161.0 192 47.9
BcaB05g21537 Brassica carinata HOM05D006324 ORTHO05D007463 6.0e-37 158.3 202 46.0
BraA02t04996Z Brassica rapa HOM05D006324 ORTHO05D007463 2.3e-36 156.4 202 48.0
Thhalv10014674m.g Eutrema salsugineum HOM05D006324 ORTHO05D007463 2.3e-36 156.4 191 48.7
Aa31LG3G17390 Aethionema arabicum HOM05D006324 ORTHO05D007463 3.9e-36 155.6 118 65.3
Aqoxy5G04067 Aquilegia oxysepala HOM05D006324 ORTHO05D007463 5.1e-36 155.2 210 45.2
CARHR203710 Cardamine hirsuta HOM05D006324 ORTHO05D007463 1.1e-35 154.1 201 44.3
Medtr0085s0010 Medicago truncatula HOM05D006324 ORTHO05D007463 1.5e-35 153.7 199 48.2
BraA10t44823Z Brassica rapa HOM05D000446 ORTHO05D000321 5.6e-35 151.8 127 61.4
BcaB08g37192 Brassica carinata HOM05D000446 ORTHO05D000321 7.4e-35 151.4 127 62.2
C09p67800 Brassica napus HOM05D000446 ORTHO05D000321 7.4e-35 151.4 127 62.2
BolC9t59542H Brassica oleracea HOM05D000446 ORTHO05D000321 7.4e-35 151.4 127 62.2
A10p27710 Brassica napus HOM05D000446 ORTHO05D000321 1.6e-34 150.2 200 44.0
BcaC03g13270 Brassica carinata HOM05D006324 ORTHO05D007463 1.4e-33 147.1 201 44.8
C02p04000 Brassica napus HOM05D006324 ORTHO05D007463 1.4e-33 147.1 201 44.8
BolC2t06362H Brassica oleracea HOM05D006324 ORTHO05D007463 1.4e-33 147.1 201 44.8
BcaB08g37153 Brassica carinata HOM05D006324 ORTHO05D007463 1.8e-33 146.7 185 49.7
ClCG09G003970 Citrullus lanatus HOM05D006324 ORTHO05D007463 5.3e-33 145.2 91 74.7
DCAR_023954 Daucus carota HOM05D006324 ORTHO05D007463 5.3e-33 145.2 195 47.2
Os07g0232200 Oryza sativa ssp. japonica HOM05D006324 ORTHO05D007463 1.2e-32 144.1 192 44.3
A02p00110 Brassica napus HOM05D006324 ORTHO05D007463 3.4e-32 142.5 229 42.8
MBI04_g17676_MAGBIO Magnolia biondii HOM05D006324 ORTHO05D007463 3.4e-32 142.5 154 51.3
ATR0618G422 Amborella trichopoda HOM05D006324 ORTHO05D007463 5.8e-32 141.7 205 43.9
Zm00001eb095000 Zea mays HOM05D006324 ORTHO05D007463 5.8e-32 141.7 92 71.7
HanXRQChr01g0015801 Helianthus annuus HOM05D006324 ORTHO05D007463 3.8e-31 139.0 135 55.6
SEGI_35641 Sequoiadendron giganteum HOM05D006324 ORTHO05D007463 6.4e-31 138.3 199 45.2
MBI02_g23139_MAGBIO Magnolia biondii HOM05D006324 ORTHO05D007463 7.1e-30 134.8 135 51.9
HPP92_005467 Vanilla planifolia HOM05D006324 ORTHO05D007463 7.1e-30 134.8 100 66.0
SMO331G0043 Selaginella moellendorffii HOM05D006324 ORTHO05D007463 1.0e-28 131.0 73 74.0
FAN10G1589 Fragaria x ananassa HOM05D006324 ORTHO05D007463 7.4e-27 124.8 199 40.7
Mapoly0022s0092 Marchantia polymorpha HOM05D006324 ORTHO05D007463 3.7e-26 122.5 100 58.0
CBR_g29320 Chara braunii HOM05D006324 ORTHO05D007463 5.3e-25 118.6 79 64.6
Pp3c20_23480 Physcomitrium patens HOM05D006324 ORTHO05D007463 2.0e-24 116.7 92 59.8
AUR62027968 Chenopodium quinoa HOM05D006324 ORTHO05D007463 3.4e-24 115.9 59 84.7
SHI04081 Sapria himalayana HOM05D006324 ORTHO05D007463 1.0e-23 114.4 89 64.0
Aa31sc1834G10 Aethionema arabicum HOM05D006324 ORTHO05D007463 1.3e-23 114.0 60 81.7
Nitab4.5_0000087g0020 Nicotiana tabacum HOM05D006324 ORTHO05D007463 2.2e-23 113.2 136 49.3
Cre13.g574800 Chlamydomonas reinhardtii HOM05D006324 ORTHO05D007463 9.3e-22 107.8 120 47.5
AagrBONN_evm.TU.Sc2ySwM_344.4124 Anthoceros agrestis HOM05D006324 ORTHO05D007463 3.0e-20 102.8 96 49.0
Psat0s1243g0040 Pisum sativum HOM05D006324 ORTHO05D007463 6.3e-18 95.1 159 40.9
CDE02G1674 Ceratophyllum demersum HOM05D006324 ORTHO05D007463 1.1e-17 94.4 51 74.5
MCO04G106 Micromonas commoda HOM05D006324 ORTHO05D007463 9.0e-17 91.3 64 57.8
AUR62032791 Chenopodium quinoa HOM05D000001 ORTHO05D000501 7.7e-16 88.2 50 78.0
PRCOL_00001468 Prasinoderma coloniale HOM05D006324 ORTHO05D007463 4.6e-13 79.0 75 49.3
AagrBONN_evm.TU.Sc2ySwM_117.1159 Anthoceros agrestis HOM05D006324 ORTHO05D007463 4.8e-10 68.9 78 50.0
AUR62042252 Chenopodium quinoa HOM05D006324 ORTHO05D007463 6.5e-07 58.5 61 52.5


User provided reference genes

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