Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 0.0e+00 1109.0 638 100.0
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 2.5e-225 785.8 695 65.5
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.7e-181 640.2 702 55.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 8.7e-178 627.9 697 54.5
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 6.7e-154 548.5 715 50.1
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 5.9e-142 508.8 703 45.2
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 9.4e-140 501.5 706 45.5
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 3.6e-139 499.6 705 44.7
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 7.7e-134 481.9 705 43.8
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.3e-133 480.3 707 47.2
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.9e-133 479.9 704 49.9
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 6.6e-133 478.8 706 43.3
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 5.5e-132 475.7 704 43.5
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 5.6e-124 449.1 712 40.9
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 2.6e-121 440.3 668 43.7
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.1e-119 434.9 651 49.9
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 3.0e-117 426.8 726 40.4
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.4e-113 413.3 704 41.1
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.4e-113 413.3 699 41.9
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.3e-109 401.4 639 41.3
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.6e-107 394.4 701 40.5
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.6e-107 393.3 705 38.9
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-105 388.3 690 45.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.2e-104 384.0 705 40.3
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.7e-104 383.3 705 40.6
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 4.9e-104 382.9 705 40.1
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 5.1e-101 372.9 704 39.3
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 5.6e-100 369.4 680 37.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 4.7e-99 366.3 718 38.3
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.1e-98 365.2 695 37.7
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 5.2e-98 362.8 670 39.1
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 4.6e-94 349.7 684 37.7
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 6.0e-94 349.4 662 36.0
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 6.0e-94 349.4 641 44.9
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 6.0e-94 349.4 651 36.7
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.1e-92 345.1 691 42.4
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 4.3e-92 343.2 672 37.4
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 3.6e-91 340.1 691 37.9
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 6.2e-91 339.3 666 38.0
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.8e-90 337.8 685 39.7
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 2.6e-89 334.0 755 40.9
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.1e-87 328.6 677 36.3
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 6.0e-86 322.8 666 36.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.0e-85 322.0 681 37.3
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.3e-85 321.6 733 33.8
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.7e-85 318.9 670 36.9
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 5.6e-84 316.2 717 34.6
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 4.8e-83 313.2 639 43.5
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 8.1e-83 312.4 672 36.3
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.4e-82 310.8 686 35.7
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.4e-79 301.6 678 37.3
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.4e-79 300.8 655 34.5
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.4e-79 299.7 692 35.4
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 9.3e-79 298.9 658 40.0
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 9.3e-79 298.9 695 35.7
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.6e-78 298.1 530 46.0
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.3e-77 295.0 641 38.1
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.8e-77 294.7 309 53.7
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.3e-77 294.3 645 38.1
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 3.0e-77 293.9 621 35.3
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-76 292.0 647 39.7
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.1e-74 285.4 674 34.1
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 3.1e-74 283.9 671 35.2
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 5.8e-73 279.6 651 38.9
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 7.6e-73 279.3 660 33.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.9e-71 274.6 674 34.6
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.5e-71 274.2 443 40.2
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 4.6e-70 270.0 663 38.6
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 2.5e-68 264.2 657 32.1
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 2.5e-68 264.2 691 33.6
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.2e-67 259.2 616 38.5
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 2.4e-66 257.7 467 41.3
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.2e-65 255.4 479 40.1
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.5e-65 255.0 669 32.1
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.0e-64 252.3 668 32.3
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 2.2e-64 251.1 668 32.2
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 6.5e-64 249.6 667 32.7
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 1.1e-63 248.8 439 40.8
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.9e-63 248.1 612 40.2
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 7.1e-63 246.1 666 31.5
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 7.1e-63 246.1 666 31.5
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 7.1e-63 246.1 360 46.7
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.6e-62 245.0 655 31.6
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.6e-62 245.0 691 32.4
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.7e-62 244.2 641 37.1
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 6.7e-61 239.6 568 40.1
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.5e-60 237.7 395 38.7
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.2e-59 234.6 680 35.7
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 8.2e-59 232.6 710 30.6
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 2.7e-54 217.6 311 40.8
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 6.1e-54 216.5 457 40.5
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 3.9e-53 213.8 677 30.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.1e-52 212.2 307 42.0
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.1e-52 212.2 261 45.6
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 1.5e-52 211.8 366 41.3
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 9.7e-52 209.1 476 33.8
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.3e-51 208.8 672 28.7
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 2.8e-51 207.6 705 28.9
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.8e-51 206.8 723 28.2
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 4.8e-51 206.8 232 50.0
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.4e-50 205.3 682 29.6
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 2.4e-50 204.5 678 28.8
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 6.9e-50 203.0 669 30.9
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 3.2e-47 194.1 424 34.4
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.2e-46 192.2 195 52.8
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 6.1e-46 189.9 688 28.6
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 3.0e-45 187.6 304 40.5
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 2.0e-44 184.9 680 28.8
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 8.5e-40 169.5 658 28.7
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.2e-39 166.4 179 52.0
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 1.0e-32 146.0 102 67.6
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.5e-31 142.1 103 65.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.2e-30 139.0 175 49.7
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 4.0e-29 134.0 330 43.6
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.0e-25 121.7 722 23.7
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 7.2e-23 113.2 328 31.1
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.3e-21 108.2 84 57.1
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 8.8e-21 106.3 113 46.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 5.7e-20 103.6 298 33.2
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 1.3e-16 92.4 301 31.2
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.0e-13 82.8 138 43.5
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 3.0e-13 81.3 205 32.7
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 5.7e-12 77.0 168 38.7
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.8e-10 72.0 105 37.1
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 9.2e-10 69.7 367 27.0


User provided reference genes

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