Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32697 Striga asiatica HOM05D004772 ORTHO05D006892 0.0e+00 1253.4 658 100.0
MSTRG.24809 Avicennia marina HOM05D004772 ORTHO05D006892 4.8e-264 914.4 643 75.7
Migut.N00065 Erythranthe guttata HOM05D004772 ORTHO05D006892 1.5e-252 876.3 644 72.4
SalBow5G3355 Salvia bowleyana HOM05D004772 ORTHO05D006892 2.7e-230 802.4 648 69.4
Cc03_g01340 Coffea canephora HOM05D004772 ORTHO05D006892 3.6e-219 765.4 656 64.6
Oeu054008.1 Olea europaea HOM05D004772 ORTHO05D006892 3.7e-216 755.4 535 73.3
Solyc01g065580.4 Solanum lycopersicum HOM05D004772 ORTHO05D006892 6.4e-216 754.6 613 66.1
Nitab4.5_0007304g0010 Nicotiana tabacum HOM05D004772 ORTHO05D006892 1.9e-215 753.1 655 64.6
CAN.G14.7 Capsicum annuum HOM05D004772 ORTHO05D006892 9.2e-215 750.7 619 65.8
Sopen01g026980 Solanum pennellii HOM05D004772 ORTHO05D006892 9.2e-215 750.7 613 65.7
Hma1.2p1_0078F.1_g040280 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 2.7e-214 749.2 660 63.0
Actinidia18636 Actinidia chinensis HOM05D004772 ORTHO05D006892 3.0e-213 745.7 665 62.1
MD13G1162200 Malus domestica HOM05D004772 ORTHO05D006892 5.6e-212 741.5 659 63.6
Prupe.1G129500 Prunus persica HOM05D004772 ORTHO05D006892 4.7e-211 738.4 659 63.0
PGSC0003DMG400001190 Solanum tuberosum HOM05D004772 ORTHO05D006892 1.1e-210 737.3 612 64.5
MD16G1162000 Malus domestica HOM05D004772 ORTHO05D006892 9.9e-209 730.7 661 62.5
RcHm_v2.0_Chr4g0423801 Rosa chinensis HOM05D004772 ORTHO05D006892 3.7e-208 728.8 655 61.2
Peaxi162Scf00065g01018 Petunia axillaris HOM05D004772 ORTHO05D006892 1.9e-207 726.5 664 62.3
GSVIVG01035090001 Vitis vinifera HOM05D004772 ORTHO05D006892 3.2e-207 725.7 665 61.7
DCAR_027042 Daucus carota HOM05D004772 ORTHO05D006892 3.5e-206 722.2 660 59.7
PGR004G0606 Punica granatum HOM05D004772 ORTHO05D006892 4.6e-206 721.8 653 59.9
Dinv29709 Davidia involucrata HOM05D004772 ORTHO05D006892 7.8e-206 721.1 665 60.3
HanXRQChr03g0085471 Helianthus annuus HOM05D004772 ORTHO05D006892 5.1e-205 718.4 552 67.8
CiPaw.02G079000 Carya illinoinensis HOM05D004772 ORTHO05D006892 6.6e-205 718.0 660 59.8
Thecc.04G291000 Theobroma cacao HOM05D004772 ORTHO05D006892 8.6e-205 717.6 653 60.8
FvH4_4g18900 Fragaria vesca HOM05D004772 ORTHO05D006892 1.1e-204 717.2 653 60.5
Gorai.006G077200 Gossypium raimondii HOM05D004772 ORTHO05D006892 9.6e-204 714.1 673 59.0
Gohir.D09G062400 Gossypium hirsutum HOM05D004772 ORTHO05D006892 3.6e-203 712.2 673 59.0
TWI09G0846 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 8.1e-203 711.1 665 58.6
ECA240G4356 Erigeron canadensis HOM05D004772 ORTHO05D006892 1.8e-202 709.9 636 61.2
Cpa.g.sc9.115 Carica papaya HOM05D004772 ORTHO05D006892 4.0e-202 708.8 646 59.9
Lsat_1_v5_gn_6_76160 Lactuca sativa HOM05D004772 ORTHO05D006892 4.0e-202 708.8 665 59.8
Eucgr.E01101 Eucalyptus grandis HOM05D004772 ORTHO05D006892 5.2e-202 708.4 650 59.5
FAN07G2363 Fragaria x ananassa HOM05D004772 ORTHO05D006892 5.2e-202 708.4 674 58.0
Gohir.A09G063500 Gossypium hirsutum HOM05D004772 ORTHO05D006892 6.8e-202 708.0 673 58.7
FAN12G2191 Fragaria x ananassa HOM05D004772 ORTHO05D006892 3.4e-201 705.7 672 58.8
QL06p010892 Quercus lobata HOM05D004772 ORTHO05D006892 5.8e-201 704.9 662 59.8
TAR362G0678 Trochodendron aralioides HOM05D004772 ORTHO05D006892 5.8e-201 704.9 634 62.1
Sed0023608 Sechium edule HOM05D004772 ORTHO05D006892 7.6e-201 704.5 657 60.6
Potri.008G211400 Populus trichocarpa HOM05D004772 ORTHO05D006892 9.9e-201 704.1 660 58.8
TWI73G1272 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 9.9e-201 704.1 657 58.8
Lj4g0015807 Lotus japonicus HOM05D004772 ORTHO05D006892 1.3e-200 703.7 650 58.3
CANSAT78G1075 Cannabis sativa HOM05D004772 ORTHO05D006892 4.9e-200 701.8 652 59.5
Cfa015449 Carpinus fangiana HOM05D004772 ORTHO05D006892 6.4e-200 701.4 661 58.9
FAN12G3151 Fragaria x ananassa HOM05D004772 ORTHO05D006892 1.9e-199 699.9 672 58.6
PSO731G0023 Papaver somniferum HOM05D004772 ORTHO05D006892 1.9e-199 699.9 665 59.5
CsaV3_6G022660 Cucumis sativus L. HOM05D004772 ORTHO05D006892 3.2e-199 699.1 658 60.0
Rhsim04G0228200 Rhododendron simsii HOM05D004772 ORTHO05D006892 3.2e-199 699.1 641 60.4
Potri.010G005600 Populus trichocarpa HOM05D004772 ORTHO05D006892 4.2e-199 698.7 661 58.5
Lalb_Chr13g0298261 Lupinus albus HOM05D004772 ORTHO05D006892 5.4e-199 698.4 573 62.8
VMungo1215G3292 Vigna mungo HOM05D004772 ORTHO05D006892 1.2e-198 697.2 632 58.4
Nn3g21575 Nelumbo nucifera HOM05D004772 ORTHO05D006892 1.6e-198 696.8 665 58.5
Glyma.17G029600 Glycine max HOM05D004772 ORTHO05D006892 1.3e-197 693.7 622 59.0
PSO764G0237 Papaver somniferum HOM05D004772 ORTHO05D006892 1.7e-197 693.3 657 59.4
Phvul.003G108600 Phaseolus vulgaris HOM05D004772 ORTHO05D006892 5.1e-197 691.8 616 59.7
Glyma.07G244300 Glycine max HOM05D004772 ORTHO05D006892 6.6e-197 691.4 633 58.8
Lj6A683G52 Lonicera japonica HOM05D004772 ORTHO05D006892 1.5e-196 690.3 660 58.8
Sc19g0003370 Simmondsia chinensis HOM05D004772 ORTHO05D006892 3.3e-196 689.1 669 57.2
MELO3C021296.2 Cucumis melo HOM05D004772 ORTHO05D006892 3.1e-194 682.6 665 58.5
Manes.03G200000 Manihot esculenta HOM05D004772 ORTHO05D006892 3.4e-193 679.1 640 57.7
TPR.G22770 Trifolium pratense HOM05D004772 ORTHO05D006892 2.9e-192 676.0 565 61.2
Ca_21472_v3 Cicer arietinum L. HOM05D004772 ORTHO05D006892 3.2e-191 672.5 633 57.3
Haze_01138 Corylus avellana HOM05D004772 ORTHO05D006892 9.3e-191 671.0 661 57.9
Medtr4g120470 Medicago truncatula HOM05D004772 ORTHO05D006892 9.3e-191 671.0 633 56.6
Nitab4.5_0000361g0050 Nicotiana tabacum HOM05D004772 ORTHO05D006892 9.3e-191 671.0 508 68.7
Haze_01142 Corylus avellana HOM05D004772 ORTHO05D006892 1.6e-190 670.2 657 58.1
Thhalv10020259m.g Eutrema salsugineum HOM05D004772 ORTHO05D006892 2.1e-190 669.8 654 57.0
Aqoxy5G00804 Aquilegia oxysepala HOM05D004772 ORTHO05D006892 6.0e-190 668.3 674 57.0
Sabra10G0004800 Salix brachista HOM05D004772 ORTHO05D006892 7.9e-190 667.9 692 54.5
C05p49530 Brassica napus HOM05D004772 ORTHO05D006892 3.0e-189 666.0 658 57.6
BolC5t33706H Brassica oleracea HOM05D004772 ORTHO05D006892 8.7e-189 664.5 658 57.1
BraA05t22104Z Brassica rapa HOM05D004772 ORTHO05D006892 4.3e-188 662.1 653 57.0
A05p32820 Brassica napus HOM05D004772 ORTHO05D006892 7.3e-188 661.4 653 57.0
ClCG06G004870 Citrullus lanatus HOM05D004772 ORTHO05D006892 9.6e-188 661.0 683 55.9
Sp3g15060 Schrenkiella parvula HOM05D004772 ORTHO05D006892 1.3e-187 660.6 659 55.8
arahy.Tifrunner.gnm1.ann1.0U01EG Arachis hypogaea HOM05D004772 ORTHO05D006892 2.1e-187 659.8 660 56.7
BcaC05g28847 Brassica carinata HOM05D004772 ORTHO05D006892 3.6e-187 659.1 661 56.6
THA.LOC104802592 Tarenaya hassleriana HOM05D004772 ORTHO05D006892 2.4e-186 656.4 651 56.2
BcaB06g25777 Brassica carinata HOM05D004772 ORTHO05D006892 1.2e-185 654.1 643 57.4
Carub.0003s1652 Capsella rubella HOM05D004772 ORTHO05D006892 2.2e-184 649.8 636 55.8
AT3G16810 Arabidopsis thaliana HOM05D004772 ORTHO05D006892 2.3e-181 639.8 645 55.5
AL3G29730 Arabidopsis lyrata HOM05D004772 ORTHO05D006892 6.7e-181 638.3 641 56.2
ATR0693G185 Amborella trichopoda HOM05D004772 ORTHO05D006892 9.6e-180 634.4 661 52.5
AUR62016163 Chenopodium quinoa HOM05D004772 ORTHO05D006892 6.9e-178 628.2 642 55.6
Aa31LG8G3880 Aethionema arabicum HOM05D004772 ORTHO05D006892 2.2e-176 623.2 662 53.8
Duzib151G1106 Durio zibethinus HOM05D004772 ORTHO05D006892 4.9e-176 622.1 634 54.9
CSS0008369 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 1.9e-175 620.2 602 58.6
Hund11943 Selenicereus undatus HOM05D004772 ORTHO05D006892 5.5e-175 618.6 617 55.4
vmacro08098 Vaccinium macrocarpon HOM05D004772 ORTHO05D006892 3.5e-174 615.9 597 59.1
AUR62035077 Chenopodium quinoa HOM05D004772 ORTHO05D006892 2.8e-171 606.3 666 53.0
Ciclev10004585m.g Citrus clementina HOM05D004772 ORTHO05D006892 2.2e-168 596.7 648 54.5
EL10Ac3g04940 Beta vulgaris HOM05D004772 ORTHO05D006892 1.1e-164 584.3 619 54.0
CSS0024712 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 1.1e-164 584.3 600 58.3
CARHR092060 Cardamine hirsuta HOM05D004772 ORTHO05D006892 5.7e-164 582.0 671 52.0
CDE02G0409 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 1.1e-159 567.8 649 50.5
Psat4g024680 Pisum sativum HOM05D004772 ORTHO05D006892 3.9e-157 559.3 623 51.7
COL.COLO4_34697 Corchorus olitorius HOM05D004772 ORTHO05D006892 2.4e-154 550.1 650 50.2
Atru.chr4.2923 Acer truncatum HOM05D004772 ORTHO05D006892 1.7e-152 543.9 661 50.7
Os03g0831100 Oryza sativa ssp. japonica HOM05D004772 ORTHO05D006892 3.8e-152 542.7 664 47.4
MBI18_g04559_MAGBIO Magnolia biondii HOM05D004772 ORTHO05D006892 9.4e-151 538.1 641 50.1
Hma1.2p1_0078F.1_g040270 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 3.7e-147 526.2 456 64.0
SMO367G0742 Selaginella moellendorffii HOM05D004772 ORTHO05D006892 2.0e-140 503.8 570 47.4
unitig_747.g21102 Utricularia gibba HOM05D004772 ORTHO05D006892 7.0e-138 495.4 643 50.4
CAN.G1132.3 Capsicum annuum HOM05D004772 ORTHO05D006892 1.4e-133 481.1 365 69.9
HPP92_010664 Vanilla planifolia HOM05D004772 ORTHO05D006892 1.6e-129 467.6 518 50.2
Pp3c5_10580 Physcomitrium patens HOM05D004772 ORTHO05D006892 1.4e-125 454.5 628 43.8
Mapoly0099s0044 Marchantia polymorpha HOM05D004772 ORTHO05D006892 2.4e-122 443.7 678 41.2
Oeu006429.1 Olea europaea HOM05D004772 ORTHO05D006892 9.2e-114 415.2 530 50.2
AagrBONN_evm.TU.Sc2ySwM_344.4680 Anthoceros agrestis HOM05D004772 ORTHO05D006892 1.2e-113 414.8 649 40.8
SHI00201 Sapria himalayana HOM05D004772 ORTHO05D006892 2.4e-98 364.0 431 51.3
CBR_g50950 Chara braunii HOM05D004772 ORTHO05D006892 2.1e-94 350.9 654 35.2
FAN17G1707 Fragaria x ananassa HOM05D004772 ORTHO05D006892 2.1e-89 334.3 278 62.9
Psat5g033800 Pisum sativum HOM05D004772 ORTHO05D006892 2.3e-88 330.9 352 52.0
AUR62015585 Chenopodium quinoa HOM05D004772 ORTHO05D006892 2.8e-86 323.9 407 47.2
CDE09G0311 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 4.9e-83 313.2 242 64.5
CDE09G1302 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 8.4e-83 312.4 308 53.9
Zm00001eb063600 Zea mays HOM05D004772 ORTHO05D006892 2.8e-70 270.8 336 44.6
MCO02G008 Micromonas commoda HOM05D004772 ORTHO05D006892 5.8e-68 263.1 643 30.2
Cre12.g528950 Chlamydomonas reinhardtii HOM05D004772 ORTHO05D006892 1.3e-59 235.3 721 27.6
SGA_v2.0_scaffold119G32683 Striga asiatica HOM05D000890 ORTHO05D000697 1.3e-59 235.3 256 56.6
Hma1.2p1_0078F.1_g040290 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 4.2e-50 203.8 144 66.7
SGA_v2.0_scaffold594G53106 Striga asiatica HOM05D004772 ORTHO05D006892 1.3e-48 198.7 296 44.6
PRCOL_00000476 Prasinoderma coloniale HOM05D004772 ORTHO05D006892 1.1e-47 195.7 619 27.5
C09p33250 Brassica napus HOM05D004772 ORTHO05D006892 2.4e-45 188.0 246 48.0
BolC5t30856H Brassica oleracea HOM05D004772 ORTHO05D006892 4.5e-44 183.7 236 47.9
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.2e-42 177.2 218 52.3
BolC9t56162H Brassica oleracea HOM05D004772 ORTHO05D006892 1.5e-39 168.7 231 46.8
C05p21600 Brassica napus HOM05D004772 ORTHO05D006892 3.3e-39 167.5 231 46.8
SalBow1G8756 Salvia bowleyana HOM05D004772 ORTHO05D006892 1.3e-35 155.6 173 57.2
Lalb_Chr12g0201101 Lupinus albus HOM05D004772 ORTHO05D006892 2.2e-35 154.8 177 49.2
Lalb_Chr12g0201121 Lupinus albus HOM05D004772 ORTHO05D006892 3.9e-32 144.1 105 63.8
SEGI_16207 Sequoiadendron giganteum HOM05D004772 ORTHO05D006892 1.1e-29 136.0 98 64.3
Glyma.08G191100 Glycine max HOM05D004772 ORTHO05D006892 8.5e-27 126.3 99 62.6
Cfa022899 Carpinus fangiana HOM05D004772 ORTHO05D006892 7.2e-26 123.2 569 24.4
BcaC05g26176 Brassica carinata HOM05D004772 ORTHO05D006892 1.2e-25 122.5 218 39.4
Actinidia40307 Actinidia chinensis HOM05D004772 ORTHO05D006892 2.7e-25 121.3 83 66.3
Lalb_Chr12g0201111 Lupinus albus HOM05D004772 ORTHO05D020841 5.2e-24 117.1 146 45.2
Zm00001eb253290 Zea mays HOM05D004772 ORTHO05D037858 4.0e-16 90.9 70 62.9
HPP92_010686 Vanilla planifolia HOM05D004772 ORTHO05D006892 2.0e-15 88.6 104 48.1
BcaC01g03298 Brassica carinata HOM05D003366 ORTHO05D004045 7.5e-15 86.7 137 44.5
Psat1g126160 Pisum sativum HOM05D004772 ORTHO05D009869 2.8e-14 84.7 77 58.4
Zm00001eb258700 Zea mays HOM05D004772 ORTHO05D020841 3.1e-13 81.3 142 36.6
BcaC04g21315 Brassica carinata HOM05D004772 ORTHO05D006892 7.0e-13 80.1 145 43.4
Zm00001eb103920 Zea mays HOM05D004772 ORTHO05D020841 7.0e-13 80.1 142 35.9
Zm00001eb355950 Zea mays HOM05D004772 ORTHO05D020841 7.0e-13 80.1 142 35.9
Zm00001eb103930 Zea mays HOM05D004772 ORTHO05D020841 9.1e-13 79.7 142 35.9
Zm00001eb246110 Zea mays HOM05D004772 ORTHO05D020841 9.1e-13 79.7 142 35.9
Zm00001eb160280 Zea mays HOM05D004772 ORTHO05D020841 2.7e-12 78.2 142 35.2
Nn4g25712 Nelumbo nucifera HOM05D004772 ORTHO05D006892 1.3e-11 75.9 120 41.7
Medtr4g120460 Medicago truncatula HOM05D004772 ORTHO05D032275 8.0e-09 66.6 43 67.4
Os12g0574400 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D014916 1.8e-08 65.5 119 30.3
BcaB04g18910 Brassica carinata HOM05D004772 ORTHO05D032275 4.0e-08 64.3 42 61.9
Psat1g126080 Pisum sativum HOM05D004772 ORTHO05D032275 1.3e-06 59.3 72 43.1


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