Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 9.6e-166 587.0 358 100.0
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 2.5e-134 482.6 366 85.5
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 6.7e-127 458.0 404 72.3
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 2.0e-126 456.4 423 65.7
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 2.0e-126 456.4 407 67.1
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 2.0e-123 446.4 234 91.9
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 1.9e-121 439.9 473 64.3
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 3.6e-120 435.6 363 68.0
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 8.8e-119 431.0 465 64.5
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.6e-118 429.5 410 67.6
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 2.2e-117 426.4 383 72.6
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 3.7e-117 425.6 362 67.7
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 3.7e-117 425.6 398 64.8
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 4.8e-117 425.2 422 65.6
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 8.2e-117 424.5 386 68.4
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 1.8e-116 423.3 428 66.6
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 3.1e-116 422.5 233 86.3
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 4.1e-116 422.2 400 60.5
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 7.0e-116 421.4 230 86.1
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 2.0e-115 419.9 438 67.6
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 3.5e-115 419.1 233 86.3
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 4.5e-115 418.7 233 85.4
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 5.9e-115 418.3 226 88.1
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 5.9e-115 418.3 234 86.3
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 7.7e-115 417.9 363 68.3
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 7.7e-115 417.9 233 85.4
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.0e-114 417.5 392 70.2
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 3.8e-114 415.6 437 63.6
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 6.5e-114 414.8 225 86.2
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 6.5e-114 414.8 386 72.8
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 8.5e-114 414.5 225 87.6
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 1.1e-113 414.1 418 68.7
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 1.1e-113 414.1 445 65.6
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 1.9e-113 413.3 426 70.0
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 3.2e-113 412.5 400 64.2
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 4.2e-113 412.1 435 63.2
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 5.5e-113 411.8 427 63.9
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 5.5e-113 411.8 231 85.7
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 7.2e-113 411.4 225 87.1
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 7.2e-113 411.4 225 87.1
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 7.2e-113 411.4 431 63.3
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 9.4e-113 411.0 354 61.6
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 2.7e-112 409.5 399 69.4
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 2.7e-112 409.5 436 63.5
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 8.0e-112 407.9 225 86.2
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 8.0e-112 407.9 407 68.6
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 1.0e-111 407.5 409 68.7
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.0e-111 407.5 225 86.7
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.8e-111 406.8 421 66.3
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 1.8e-111 406.8 445 61.6
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.3e-111 406.4 233 83.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-111 406.4 381 65.9
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 4.0e-111 405.6 225 85.3
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 5.2e-111 405.2 421 67.0
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 6.7e-111 404.8 389 63.2
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 6.7e-111 404.8 225 85.8
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.2e-110 404.1 387 66.1
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 1.2e-110 404.1 231 82.7
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.5e-110 403.7 389 62.5
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 1.5e-110 403.7 418 67.2
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 2.6e-110 402.9 432 66.2
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 3.3e-110 402.5 254 78.3
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 3.3e-110 402.5 226 84.1
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 4.4e-110 402.1 408 61.8
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 5.7e-110 401.7 225 84.4
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 7.5e-110 401.4 388 70.4
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 1.3e-109 400.6 440 63.6
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.3e-109 400.6 225 85.3
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.3e-109 400.6 225 85.3
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 3.7e-109 399.1 389 67.9
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.7e-109 399.1 225 84.0
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 3.7e-109 399.1 397 64.7
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 3.7e-109 399.1 337 75.1
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.8e-109 398.7 225 84.0
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 4.8e-109 398.7 424 67.2
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 6.3e-109 398.3 418 65.1
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 1.1e-108 397.5 224 84.4
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.1e-108 397.5 430 61.6
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 1.1e-108 397.5 448 64.1
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-108 397.1 225 83.6
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.8e-108 396.7 361 60.4
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.8e-108 396.7 435 65.1
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 4.1e-108 395.6 234 82.1
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 5.3e-108 395.2 405 64.7
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.3e-108 395.2 225 83.1
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 2.2e-106 389.8 441 60.8
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.1e-105 387.5 361 66.5
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 1.9e-105 386.7 392 58.7
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 3.2e-105 386.0 407 68.1
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 5.5e-105 385.2 456 59.0
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.6e-104 383.6 475 60.4
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 2.1e-104 383.3 389 60.9
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 6.1e-104 381.7 413 64.9
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 4.1e-100 369.0 201 86.6
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 5.4e-100 368.6 292 65.4
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 9.1e-100 367.9 225 77.3
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 2.0e-99 366.7 409 57.2
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 2.0e-99 366.7 315 62.2
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.9e-98 362.8 230 73.5
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.9e-98 362.8 230 73.5
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.1e-97 360.9 225 76.0
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 5.5e-97 358.6 235 75.7
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.0e-95 354.4 231 73.6
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.4e-92 344.0 353 64.3
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 4.3e-89 332.4 180 88.3
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.4e-87 327.4 177 89.3
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.4e-78 296.2 154 87.0
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 6.0e-75 285.4 172 77.9
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 3.0e-74 283.1 148 85.8
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.7e-66 257.3 311 56.6
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.5e-65 254.2 136 83.8
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 1.1e-63 248.1 222 57.2
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 1.4e-60 237.7 130 86.9
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 7.1e-60 235.3 211 54.5
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 3.5e-59 233.0 340 55.9
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.0e-58 231.5 146 76.0
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 1.3e-58 231.1 130 84.6
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 6.6e-58 228.8 222 50.0
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 2.5e-57 226.9 114 93.9
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.4e-55 221.1 262 60.3
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 6.9e-55 218.8 174 64.9
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 3.4e-46 189.9 311 48.9
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 7.6e-46 188.7 340 51.8
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 9.9e-46 188.3 96 85.4
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 1.0e-42 178.3 101 80.2
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 2.3e-42 177.2 322 58.4
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.3e-41 172.9 197 53.8
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 5.6e-41 172.6 98 82.7
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 1.6e-40 171.0 261 57.5
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 7.6e-38 162.2 96 79.2
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 8.4e-37 158.7 96 79.2
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.9e-36 157.5 130 56.2
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 9.3e-36 155.2 97 82.5
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 5.1e-34 149.4 84 79.8
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 4.3e-33 146.4 83 79.5
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 7.4e-33 145.6 92 80.4
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.5e-30 137.9 85 77.6
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.5e-30 137.9 79 86.1
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 1.0e-29 135.2 80 80.0
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 4.2e-28 129.8 80 77.5
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 5.1e-26 122.9 256 59.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 5.1e-26 122.9 79 73.4
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.2e-24 117.5 77 77.9
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 5.3e-23 112.8 74 68.9
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.3e-21 108.2 190 58.4
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 2.2e-21 107.5 68 69.1
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.9e-20 104.4 83 65.1
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 2.2e-16 90.9 60 73.3
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 9.1e-15 85.5 259 46.3
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 3.4e-14 83.6 61 63.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.8e-13 80.1 236 53.8
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-12 78.2 47 89.4
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 2.5e-12 77.4 43 83.7
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 5.1e-10 69.7 48 77.1


User provided reference genes

Program Settings