Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.5e-98 362.5 230 100.0
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.9e-42 176.8 180 50.6
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.5e-34 150.6 151 51.0
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 1.2e-33 147.5 178 42.7
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 4.7e-33 145.6 70 95.7
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.1e-28 130.2 180 43.3
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 7.8e-28 128.3 76 72.4
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 1.7e-27 127.1 106 56.6
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.7e-27 127.1 76 72.4
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 5.1e-27 125.6 76 69.7
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 6.6e-27 125.2 74 77.0
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 8.7e-27 124.8 74 74.3
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 8.7e-27 124.8 75 73.3
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 1.1e-26 124.4 76 71.1
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.1e-26 124.4 76 69.7
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.5e-26 124.0 76 68.4
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 3.3e-26 122.9 75 69.3
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.3e-26 122.9 76 68.4
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 3.3e-26 122.9 76 68.4
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 4.3e-26 122.5 76 69.7
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.3e-26 122.5 133 49.6
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 4.3e-26 122.5 76 68.4
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 4.3e-26 122.5 133 48.1
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 5.6e-26 122.1 133 50.4
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 5.6e-26 122.1 76 75.0
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 9.6e-26 121.3 76 67.1
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 9.6e-26 121.3 133 49.6
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 1.3e-25 120.9 76 68.4
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.6e-25 120.6 76 68.4
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.1e-25 120.2 75 68.0
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 2.1e-25 120.2 76 67.1
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.1e-25 120.2 75 69.3
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.1e-25 120.2 76 67.1
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 2.1e-25 120.2 106 52.8
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 2.1e-25 120.2 66 77.3
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 2.1e-25 120.2 76 65.8
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 3.6e-25 119.4 106 52.8
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 3.6e-25 119.4 106 52.8
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 4.8e-25 119.0 75 70.7
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 51.9
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 52.8
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 52.8
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 52.8
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 51.9
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 6.2e-25 118.6 106 52.8
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 6.2e-25 118.6 76 68.4
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 8.1e-25 118.2 106 51.9
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 8.1e-25 118.2 75 69.3
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.1e-24 117.9 67 77.6
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.4e-24 117.5 106 51.9
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 4.0e-24 115.9 76 67.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.0e-24 115.9 76 65.8
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.0e-24 115.9 76 65.8
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 9.0e-24 114.8 125 48.8
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.2e-23 114.4 68 70.6
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 2.6e-23 113.2 64 75.0
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 2.6e-23 113.2 72 69.4
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 4.9e-22 109.0 74 63.5
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.1e-21 107.8 63 74.6
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.4e-21 107.5 75 56.0
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 2.4e-21 106.7 104 51.9
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 3.2e-21 106.3 92 55.4
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.2e-20 104.4 61 73.8
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 2.1e-20 103.6 60 75.0
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 4.6e-20 102.4 58 75.9
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.3e-19 100.9 62 71.0
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.6e-19 98.6 58 74.1
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.5e-18 97.4 62 64.5
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 1.5e-18 97.4 62 64.5
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 3.3e-18 96.3 66 62.1
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 7.3e-18 95.1 94 44.7
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 9.6e-18 94.7 66 60.6
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 9.6e-18 94.7 60 66.7
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.1e-17 93.6 56 69.6
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 4.8e-17 92.4 139 41.7
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 4.0e-16 89.4 117 41.9
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 3.8e-14 82.8 48 70.8
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.4e-13 80.1 141 36.2
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 2.7e-12 76.6 131 37.4
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.0e-11 74.7 60 58.3
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 5.1e-11 72.4 36 80.6
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 5.1e-11 72.4 36 80.6
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 5.1e-11 72.4 94 43.6
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 6.7e-11 72.0 88 42.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 6.7e-11 72.0 141 31.9
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 4.3e-10 69.3 36 77.8
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 1.6e-09 67.4 34 79.4
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 2.1e-09 67.0 33 81.8
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 6.2e-09 65.5 33 81.8
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.4e-08 64.3 31 80.6
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.4e-08 63.5 64 46.9
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 3.1e-08 63.2 63 47.6
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.1e-08 63.2 63 47.6
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 5.3e-08 62.4 36 69.4
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.2e-07 61.2 29 79.3
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 1.3e-06 57.8 88 37.5
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.3e-06 57.8 27 81.5
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.3e-06 57.8 27 81.5
BcaC03g13436 Brassica carinata HOM05D000424 ORTHO05D000355 3.8e-06 56.2 227 24.7
BcaC07g40632 Brassica carinata HOM05D003039 ORTHO05D008410 3.8e-06 56.2 135 28.1
C02p07450 Brassica napus HOM05D000424 ORTHO05D000355 3.8e-06 56.2 227 24.7
BolC2t06676H Brassica oleracea HOM05D000424 ORTHO05D000355 3.8e-06 56.2 227 24.7
Lj2A685T11 Lonicera japonica HOM05D005862 ORTHO05D007731 4.9e-06 55.8 140 29.3


User provided reference genes

Program Settings