Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.6e-256 889.4 619 100.0
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 9.8e-150 534.6 617 62.4
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 1.3e-146 524.2 634 60.4
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 3.4e-142 509.6 623 60.0
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.7e-141 507.3 622 59.3
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 3.7e-141 506.1 617 68.4
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.1e-140 504.6 614 59.8
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 5.4e-140 502.3 591 61.8
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 1.6e-139 500.7 628 58.9
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 6.1e-136 488.8 611 57.9
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 5.4e-132 475.7 624 59.6
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 7.0e-132 475.3 624 60.6
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 3.5e-131 473.0 662 55.0
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 5.9e-131 472.2 625 59.4
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.7e-130 470.7 589 58.7
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 1.6e-128 464.2 595 55.5
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 3.4e-126 456.4 624 54.2
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 7.5e-126 455.3 622 59.2
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.8e-126 454.9 607 53.7
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.3e-125 454.5 612 57.0
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 4.9e-125 452.6 625 54.1
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 6.4e-125 452.2 621 59.7
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 2.4e-124 450.3 611 57.6
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 2.4e-124 450.3 618 58.9
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 3.2e-124 449.9 625 59.5
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 5.4e-124 449.1 597 58.6
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 9.2e-124 448.4 617 60.5
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 1.2e-123 448.0 602 55.8
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 6.0e-123 445.7 613 53.0
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.3e-122 444.5 643 57.2
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 2.3e-122 443.7 608 55.6
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 3.9e-122 443.0 604 55.3
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 1.1e-121 441.4 599 58.1
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 5.6e-121 439.1 614 47.2
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 5.6e-121 439.1 635 58.0
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 7.3e-121 438.7 652 55.4
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.2e-120 438.0 601 60.4
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 2.1e-120 437.2 610 55.4
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 3.6e-120 436.4 615 55.6
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 6.2e-120 435.6 615 52.2
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 1.1e-119 434.9 611 55.2
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 6.8e-119 432.2 614 57.0
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 2.0e-118 430.6 600 59.0
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 2.6e-118 430.3 613 54.6
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 4.4e-118 429.5 610 54.4
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 1.7e-117 427.6 631 52.6
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 1.7e-117 427.6 623 47.2
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 1.7e-117 427.6 613 54.6
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 2.2e-117 427.2 610 55.6
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 2.2e-117 427.2 590 49.3
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 2.9e-117 426.8 612 61.4
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 1.9e-116 424.1 617 57.1
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 2.4e-116 423.7 601 56.6
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 2.4e-116 423.7 607 45.6
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 4.1e-116 422.9 627 54.7
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 5.4e-116 422.5 623 56.2
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 5.4e-116 422.5 618 57.8
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 1.2e-115 421.4 629 53.9
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.2e-115 421.4 613 57.1
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 6.0e-115 419.1 617 53.8
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 3.9e-114 416.4 611 53.0
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 3.9e-114 416.4 609 58.3
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 5.1e-114 416.0 613 53.8
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 6.6e-114 415.6 640 51.7
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 1.1e-113 414.8 601 52.9
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 1.1e-113 414.8 640 52.3
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 2.5e-113 413.7 613 54.0
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 2.5e-113 413.7 612 52.8
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 9.5e-113 411.8 601 56.1
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.6e-112 411.0 611 53.7
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 2.8e-112 410.2 609 52.5
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 8.1e-112 408.7 609 54.4
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 2.4e-111 407.1 600 53.5
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 2.4e-111 407.1 596 51.8
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 8.9e-111 405.2 600 54.3
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 8.9e-111 405.2 616 51.3
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 1.2e-110 404.8 619 55.4
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 1.5e-110 404.4 614 51.5
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 2.0e-110 404.1 609 57.8
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 3.4e-110 403.3 634 48.6
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 1.7e-109 401.0 601 54.9
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 6.4e-109 399.1 593 53.3
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 2.7e-107 393.7 611 50.6
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 4.6e-107 392.9 608 54.3
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 6.0e-107 392.5 598 50.7
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 8.7e-106 388.7 593 53.5
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.5e-105 387.9 613 53.3
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.5e-105 387.9 611 50.7
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 1.5e-105 387.9 621 56.8
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 2.5e-105 387.1 597 56.8
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 5.6e-105 386.0 673 49.8
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 9.6e-105 385.2 597 55.1
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 2.8e-104 383.6 601 51.4
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 4.7e-104 382.9 593 54.0
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 8.1e-104 382.1 597 54.8
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 1.5e-102 377.9 606 45.9
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 2.4e-100 370.5 619 52.3
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 7.1e-100 369.0 608 55.9
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 3.5e-99 366.7 602 48.3
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 4.6e-99 366.3 604 52.3
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 7.8e-99 365.5 600 52.3
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.0e-98 365.2 598 42.0
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 1.7e-98 364.4 601 43.6
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 8.7e-98 362.1 579 42.5
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 5.8e-94 349.4 601 50.2
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 3.5e-91 340.1 609 41.1
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 5.1e-90 336.3 539 49.9
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 4.3e-89 333.2 377 55.7
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 2.4e-84 317.4 647 48.8
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 4.2e-84 316.6 591 48.1
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 7.6e-78 295.8 414 56.0
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 3.7e-72 276.9 590 46.8
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 7.6e-70 269.2 597 40.7
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 7.2e-68 262.7 558 39.6
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.8e-66 258.1 586 35.7
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 3.0e-66 257.3 419 46.3
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 2.5e-65 254.2 551 37.2
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 8.5e-61 239.2 631 32.3
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 2.5e-60 237.7 201 67.2
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.3e-50 204.5 150 76.7
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 1.7e-48 198.4 394 46.7
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 4.1e-47 193.7 243 49.0
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 4.1e-47 193.7 179 62.0
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 1.6e-46 191.8 303 43.9
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 8.5e-45 186.0 242 46.3
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 5.7e-41 173.3 312 39.4
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.4e-39 167.9 407 43.5
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 1.5e-36 158.7 302 40.4
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 1.3e-32 145.6 129 61.2
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 1.3e-32 145.6 129 61.2
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 3.5e-30 137.5 99 73.7
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 3.8e-29 134.0 238 38.7
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 1.8e-26 125.2 104 61.5
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 4.3e-20 104.0 180 43.3
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 5.2e-18 97.1 74 74.3
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.0e-17 95.1 179 38.0
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 4.9e-16 90.5 71 67.6
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.9e-15 88.6 55 81.8
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 7.8e-14 83.2 85 55.3
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 5.0e-13 80.5 67 68.7
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.5e-12 78.2 78 53.8
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 5.6e-12 77.0 75 54.7
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 1.2e-11 75.9 56 71.4
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 1.6e-11 75.5 262 29.4
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 1.9e-07 62.0 101 40.6
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.9e-07 62.0 67 56.7
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 3.2e-07 61.2 54 59.3
SalBow8G4481 Salvia bowleyana HOM05D004813 ORTHO05D018488 4.6e-06 57.4 49 67.3


User provided reference genes

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