Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31766 Striga asiatica HOM05D001355 ORTHO05D016189 2.7e-86 322.0 165 100.0
SGA_v2.0_scaffold25G10722 Striga asiatica HOM05D001355 ORTHO05D004435 2.3e-69 265.8 159 88.7
SGA_v2.0_scaffold173G39199 Striga asiatica HOM05D001355 ORTHO05D016189 6.0e-30 134.8 111 65.8
SGA_v2.0_scaffold7G04147 Striga asiatica HOM05D002435 ORTHO05D002550 8.7e-29 131.0 100 70.0
SGA_v2.0_scaffold114G31817 Striga asiatica HOM05D001355 ORTHO05D004435 4.0e-26 122.1 96 67.7
SalBow6G6731 Salvia bowleyana HOM05D001355 ORTHO05D004435 5.3e-26 121.7 97 66.0
Lsat_1_v5_gn_6_23561 Lactuca sativa HOM05D001355 ORTHO05D004435 1.2e-25 120.6 99 62.6
MSTRG.4362 Avicennia marina HOM05D001355 ORTHO05D004435 2.6e-25 119.4 97 62.9
MSTRG.9680 Avicennia marina HOM05D001355 ORTHO05D004435 4.5e-25 118.6 97 63.9
Oeu053274.1 Olea europaea HOM05D001355 ORTHO05D004435 1.7e-24 116.7 97 62.9
Lsat_1_v5_gn_2_75740 Lactuca sativa HOM05D001355 ORTHO05D004435 2.9e-24 115.9 96 62.5
Lsat_1_v5_gn_8_101580 Lactuca sativa HOM05D001355 ORTHO05D004052 3.8e-24 115.5 97 60.8
Oeu007913.1 Olea europaea HOM05D001355 ORTHO05D004435 3.8e-24 115.5 97 61.9
Gorai.008G131200 Gossypium raimondii HOM05D001355 ORTHO05D004435 6.4e-24 114.8 89 62.9
CAN.G57.3 Capsicum annuum HOM05D001355 ORTHO05D004435 8.4e-24 114.4 98 62.2
Hund16752 Selenicereus undatus HOM05D001355 ORTHO05D004435 8.4e-24 114.4 98 62.2
Migut.D01961 Erythranthe guttata HOM05D001355 ORTHO05D004435 1.1e-23 114.0 97 61.9
Lsat_1_v5_gn_3_140821 Lactuca sativa HOM05D001355 ORTHO05D004435 1.1e-23 114.0 97 59.8
Sc01g0002190 Simmondsia chinensis HOM05D001355 ORTHO05D004435 1.1e-23 114.0 97 59.8
PGSC0003DMG402013561 Solanum tuberosum HOM05D001355 ORTHO05D004435 2.4e-23 112.8 98 61.2
Gohir.A12G116700 Gossypium hirsutum HOM05D001355 ORTHO05D004435 3.2e-23 112.5 97 59.8
Aqoxy5G04344 Aquilegia oxysepala HOM05D001355 ORTHO05D004435 5.4e-23 111.7 98 61.2
Cpa.g.sc193.13 Carica papaya HOM05D001355 ORTHO05D004435 5.4e-23 111.7 97 59.8
Gohir.D11G105600 Gossypium hirsutum HOM05D001355 ORTHO05D004435 7.1e-23 111.3 97 57.7
Gorai.007G112900 Gossypium raimondii HOM05D001355 ORTHO05D004435 7.1e-23 111.3 97 57.7
unitig_744.g24397 Utricularia gibba HOM05D001355 ORTHO05D004435 7.1e-23 111.3 97 59.8
Dinv32644 Davidia involucrata HOM05D001355 ORTHO05D004435 9.3e-23 110.9 97 57.7
Nitab4.5_0000807g0170 Nicotiana tabacum HOM05D001355 ORTHO05D004435 9.3e-23 110.9 98 60.2
ECA247G2213 Erigeron canadensis HOM05D001355 ORTHO05D004435 1.2e-22 110.5 89 61.8
Gohir.A11G101000 Gossypium hirsutum HOM05D001355 ORTHO05D004435 1.2e-22 110.5 97 57.7
Nitab4.5_0000170g0230 Nicotiana tabacum HOM05D001355 ORTHO05D004435 1.2e-22 110.5 98 60.2
AUR62038348 Chenopodium quinoa HOM05D001355 ORTHO05D004435 1.6e-22 110.2 97 58.8
Dinv18760 Davidia involucrata HOM05D001355 ORTHO05D004435 1.6e-22 110.2 97 57.7
Duzib138G1500 Durio zibethinus HOM05D001355 ORTHO05D004435 1.6e-22 110.2 97 56.7
Actinidia22219 Actinidia chinensis HOM05D001355 ORTHO05D004435 2.1e-22 109.8 97 57.7
Gohir.D12G120200 Gossypium hirsutum HOM05D001355 ORTHO05D004435 2.1e-22 109.8 97 58.8
HanXRQChr13g0426481 Helianthus annuus HOM05D001355 ORTHO05D004435 2.1e-22 109.8 98 59.2
Thecc.01G333300 Theobroma cacao HOM05D001355 ORTHO05D004435 2.1e-22 109.8 97 56.7
COL.COLO4_23047 Corchorus olitorius HOM05D001355 ORTHO05D004435 2.7e-22 109.4 97 56.7
Phvul.009G257800 Phaseolus vulgaris HOM05D001355 ORTHO05D004435 2.7e-22 109.4 97 57.7
Sabra02G0134400 Salix brachista HOM05D001355 ORTHO05D004435 2.7e-22 109.4 97 57.7
TAR375G0155 Trochodendron aralioides HOM05D001355 ORTHO05D004435 2.7e-22 109.4 97 58.8
arahy.Tifrunner.gnm1.ann1.VQ9M9S Arachis hypogaea HOM05D001355 ORTHO05D004435 3.5e-22 109.0 97 57.7
Cc02_g39940 Coffea canephora HOM05D001355 ORTHO05D004435 3.5e-22 109.0 97 57.7
DCAR_002977 Daucus carota HOM05D001355 ORTHO05D004435 3.5e-22 109.0 97 55.7
Gohir.D12G193800 Gossypium hirsutum HOM05D001355 ORTHO05D004435 4.6e-22 108.6 94 56.4
Ca_09545_v3 Cicer arietinum L. HOM05D001355 ORTHO05D004435 6.0e-22 108.2 97 57.7
Thhalv10007695m.g Eutrema salsugineum HOM05D001355 ORTHO05D004435 6.0e-22 108.2 97 57.7
Gorai.008G130900 Gossypium raimondii HOM05D001355 ORTHO05D004435 6.0e-22 108.2 97 57.7
TWI14G0894 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 6.0e-22 108.2 89 62.9
GSVIVG01027439001 Vitis vinifera HOM05D001355 ORTHO05D004435 6.0e-22 108.2 97 57.7
Ah.05g178950 Amaranthus hybridus HOM05D001355 ORTHO05D004435 7.9e-22 107.8 97 57.7
EL10Ac3g06767 Beta vulgaris HOM05D001355 ORTHO05D004435 7.9e-22 107.8 97 56.7
CSS0001663 Camellia sinensis var. sinensis HOM05D001355 ORTHO05D004435 7.9e-22 107.8 98 58.2
Atru.chr5.767 Acer truncatum HOM05D001355 ORTHO05D004435 1.0e-21 107.5 97 56.7
Actinidia04171 Actinidia chinensis HOM05D001355 ORTHO05D004435 1.0e-21 107.5 97 56.7
Aa31LG1G10460 Aethionema arabicum HOM05D001355 ORTHO05D010028 1.0e-21 107.5 97 57.7
Glyma.03G261000 Glycine max HOM05D001355 ORTHO05D004435 1.0e-21 107.5 97 58.8
Lj3g0000851 Lotus japonicus HOM05D001355 ORTHO05D004435 1.0e-21 107.5 97 57.7
TWI23G0366 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 1.0e-21 107.5 89 62.9
VMungo1309G2338 Vigna mungo HOM05D001355 ORTHO05D004435 1.0e-21 107.5 97 56.7
Aa31LG5G1160 Aethionema arabicum HOM05D001355 ORTHO05D004435 1.3e-21 107.1 97 57.7
AUR62041497 Chenopodium quinoa HOM05D001355 ORTHO05D004435 1.3e-21 107.1 98 58.2
unitig_21.g20446 Utricularia gibba HOM05D001355 ORTHO05D004435 1.3e-21 107.1 97 57.7
vmacro12644 Vaccinium macrocarpon HOM05D001355 ORTHO05D016189 1.3e-21 107.1 89 61.8
CARHR001370 Cardamine hirsuta HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
Eucgr.E01069 Eucalyptus grandis HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
Gorai.008G208500 Gossypium raimondii HOM05D001355 ORTHO05D004435 1.8e-21 106.7 94 57.4
MBI12_g11800_MAGBIO Magnolia biondii HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
Manes.01G239900 Manihot esculenta HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 55.7
Psat0s3525g0080 Pisum sativum HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
Sp1g01190 Schrenkiella parvula HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
THA.LOC104801350 Tarenaya hassleriana HOM05D001355 ORTHO05D004435 1.8e-21 106.7 97 56.7
ATR0743G158 Amborella trichopoda HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 56.7
C05p00840 Brassica napus HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 56.7
BolC5t28867H Brassica oleracea HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 56.7
BolC8t52861H Brassica oleracea HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 56.7
FvH4_7g17660 Fragaria vesca HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN01G1819 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN03G2680 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN06G2862 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN06G2960 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN10G2035 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
FAN10G3904 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
Phvul.010G119600 Phaseolus vulgaris HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 56.7
RcHm_v2.0_Chr1g0361101 Rosa chinensis HOM05D001355 ORTHO05D004435 2.3e-21 106.3 97 55.7
Cfa003735 Carpinus fangiana HOM05D001355 ORTHO05D004435 3.0e-21 105.9 97 55.7
CDE08G0646 Ceratophyllum demersum HOM05D001355 ORTHO05D004435 3.0e-21 105.9 89 59.6
Haze_15734 Corylus avellana HOM05D001355 ORTHO05D004435 3.0e-21 105.9 97 55.7
Glyma.19G260000 Glycine max HOM05D001355 ORTHO05D004435 3.0e-21 105.9 97 56.7
VMungo0331G2037 Vigna mungo HOM05D001355 ORTHO05D004435 3.0e-21 105.9 97 56.7
Atru.chr9.1849 Acer truncatum HOM05D001355 ORTHO05D004435 3.9e-21 105.5 93 58.1
Medtr8g024310 Medicago truncatula HOM05D001355 ORTHO05D004435 3.9e-21 105.5 88 59.1
TPR.G4770 Trifolium pratense HOM05D001355 ORTHO05D004435 3.9e-21 105.5 89 59.6
TWI59G1435 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 3.9e-21 105.5 89 60.7
BcaC07g42362 Brassica carinata HOM05D001355 ORTHO05D004435 5.1e-21 105.1 97 55.7
A10p00800 Brassica napus HOM05D001355 ORTHO05D004435 5.1e-21 105.1 97 55.7
BraA10t42356Z Brassica rapa HOM05D001355 ORTHO05D004435 5.1e-21 105.1 97 55.7
MELO3C022306.2 Cucumis melo HOM05D001355 ORTHO05D004435 5.1e-21 105.1 98 57.1
Prupe.2G197700 Prunus persica HOM05D001355 ORTHO05D004435 5.1e-21 105.1 97 55.7
Oeu043195.1 Olea europaea HOM05D001355 ORTHO05D004435 6.7e-21 104.8 101 56.4
Potri.002G179500 Populus trichocarpa HOM05D001355 ORTHO05D004435 6.7e-21 104.8 97 55.7
PGR042G0370 Punica granatum HOM05D001355 ORTHO05D004435 6.7e-21 104.8 97 54.6
SEGI_39603 Sequoiadendron giganteum HOM05D001355 ORTHO05D004435 6.7e-21 104.8 97 55.7
AL1G11430 Arabidopsis lyrata HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
AT1G01090 Arabidopsis thaliana HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
A09p68890 Brassica napus HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
BraA09t42229Z Brassica rapa HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
Carub.0001s0113 Capsella rubella HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
MD07G1159600 Malus domestica HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 54.6
Manes.05G016500 Manihot esculenta HOM05D001355 ORTHO05D004435 8.7e-21 104.4 97 55.7
Peaxi162Scf00047g02454 Petunia axillaris HOM05D001355 ORTHO05D004435 8.7e-21 104.4 96 59.4
Glyma.16G018300 Glycine max HOM05D001355 ORTHO05D004435 1.1e-20 104.0 97 55.7
Mapoly0005s0206 Marchantia polymorpha HOM05D001355 ORTHO05D004435 1.1e-20 104.0 89 59.6
Solyc12g009400.2 Solanum lycopersicum HOM05D001355 ORTHO05D004435 1.1e-20 104.0 98 56.1
Solyc12g009410.2 Solanum lycopersicum HOM05D001355 ORTHO05D004435 1.1e-20 104.0 98 56.1
Sopen12g004390 Solanum pennellii HOM05D001355 ORTHO05D004435 1.1e-20 104.0 98 56.1
Sopen12g004400 Solanum pennellii HOM05D001355 ORTHO05D004435 1.1e-20 104.0 98 56.1
PGSC0003DMG400002921 Solanum tuberosum HOM05D001355 ORTHO05D004435 1.1e-20 104.0 98 56.1
BcaC07g42365 Brassica carinata HOM05D001355 ORTHO05D004435 1.5e-20 103.6 97 54.6
BcaC07g42368 Brassica carinata HOM05D001355 ORTHO05D004435 1.5e-20 103.6 97 54.6
BcaC07g42372 Brassica carinata HOM05D001355 ORTHO05D004435 1.5e-20 103.6 97 54.6
C08p53460 Brassica napus HOM05D001355 ORTHO05D004435 1.5e-20 103.6 97 54.6
MBI04_g22065_MAGBIO Magnolia biondii HOM05D001355 ORTHO05D004435 1.5e-20 103.6 97 54.6
Nitab4.5_0000073g0440 Nicotiana tabacum HOM05D001355 ORTHO05D004435 1.5e-20 103.6 98 56.1
CsaV3_6G008320 Cucumis sativus L. HOM05D001355 ORTHO05D004435 1.9e-20 103.2 98 57.1
Glyma.07G049600 Glycine max HOM05D001355 ORTHO05D004435 1.9e-20 103.2 97 54.6
CAN.G1591.4 Capsicum annuum HOM05D001355 ORTHO05D004435 2.5e-20 102.8 98 55.1
Ca_26062_v3 Cicer arietinum L. HOM05D001355 ORTHO05D004435 2.5e-20 102.8 88 58.0
Lj2A152G22 Lonicera japonica HOM05D001355 ORTHO05D004435 2.5e-20 102.8 97 54.6
Nitab4.5_0002570g0010 Nicotiana tabacum HOM05D001355 ORTHO05D004435 3.3e-20 102.4 98 55.1
Os04g0119400 Oryza sativa ssp. japonica HOM05D001355 ORTHO05D004435 3.3e-20 102.4 89 57.3
Sed0007101 Sechium edule HOM05D001355 ORTHO05D004435 3.3e-20 102.4 97 53.6
CANSAT56G2429 Cannabis sativa HOM05D001355 ORTHO05D004435 4.3e-20 102.1 97 53.6
Lalb_Chr10g0100881 Lupinus albus HOM05D001355 ORTHO05D004435 4.3e-20 102.1 98 57.1
Pp3c15_8520 Physcomitrium patens HOM05D001355 ORTHO05D004435 5.6e-20 101.7 97 52.6
TPR.G19841 Trifolium pratense HOM05D001355 ORTHO05D004435 5.6e-20 101.7 88 58.0
vmacro11486 Vaccinium macrocarpon HOM05D001355 ORTHO05D004435 5.6e-20 101.7 97 54.6
C08p52820 Brassica napus HOM05D001355 ORTHO05D004435 7.4e-20 101.3 97 53.6
ClCG06G002270 Citrullus lanatus HOM05D001355 ORTHO05D004435 7.4e-20 101.3 98 57.1
Pp3c9_5460 Physcomitrium patens HOM05D001355 ORTHO05D004435 7.4e-20 101.3 89 55.1
Pp3c9_5550 Physcomitrium patens HOM05D001355 ORTHO05D004435 7.4e-20 101.3 89 55.1
QL08p047239 Quercus lobata HOM05D001355 ORTHO05D004435 7.4e-20 101.3 97 52.6
Sed0023392 Sechium edule HOM05D001355 ORTHO05D004435 7.4e-20 101.3 97 53.6
SMO118G0177 Selaginella moellendorffii HOM05D001355 ORTHO05D004435 7.4e-20 101.3 87 60.9
AagrBONN_evm.TU.Sc2ySwM_368.305 Anthoceros agrestis HOM05D001355 ORTHO05D004435 9.6e-20 100.9 89 57.3
arahy.Tifrunner.gnm1.ann1.G7YSG8 Arachis hypogaea HOM05D001355 ORTHO05D004435 1.6e-19 100.1 97 52.6
Ciclev10020210m.g Citrus clementina HOM05D001355 ORTHO05D004435 1.6e-19 100.1 97 53.6
Psat4g164040 Pisum sativum HOM05D001355 ORTHO05D004435 1.6e-19 100.1 88 56.8
THA.LOC104825902 Tarenaya hassleriana HOM05D001355 ORTHO05D004435 2.1e-19 99.8 97 53.6
TAR374G0567 Trochodendron aralioides HOM05D001355 ORTHO05D004435 2.1e-19 99.8 99 55.6
SEGI_07156 Sequoiadendron giganteum HOM05D001355 ORTHO05D004435 2.8e-19 99.4 89 55.1
AagrBONN_evm.TU.Sc2ySwM_368.294 Anthoceros agrestis HOM05D001355 ORTHO05D004435 3.6e-19 99.0 89 55.1
Zm00001eb089020 Zea mays HOM05D001355 ORTHO05D004435 3.6e-19 99.0 88 56.8
Rhsim02G0253800 Rhododendron simsii HOM05D001355 ORTHO05D004435 6.2e-19 98.2 97 52.6
Eucgr.E01071 Eucalyptus grandis HOM05D001355 ORTHO05D004435 8.1e-19 97.8 97 52.6
PSO017G0474 Papaver somniferum HOM05D001355 ORTHO05D004435 8.1e-19 97.8 98 55.1
PSO063G1331 Papaver somniferum HOM05D001355 ORTHO05D004435 8.1e-19 97.8 98 55.1
PSO541G6414 Papaver somniferum HOM05D001355 ORTHO05D004435 8.1e-19 97.8 98 55.1
PSO675G4431 Papaver somniferum HOM05D001355 ORTHO05D004435 1.4e-18 97.1 98 54.1
SGA_v2.0_scaffold24G10324 Striga asiatica HOM05D001355 ORTHO05D016189 2.4e-18 96.3 90 62.2
CDE08G0084 Ceratophyllum demersum HOM05D001355 ORTHO05D004435 5.3e-18 95.1 88 54.5
Hma1.2p1_0074F.1_g038730 Hydrangea macrophylla HOM05D001355 ORTHO05D004435 1.2e-17 94.0 97 51.5
HPP92_021520 Vanilla planifolia HOM05D001355 ORTHO05D004435 1.5e-17 93.6 89 52.8
HPP92_021499 Vanilla planifolia HOM05D001355 ORTHO05D004435 2.0e-17 93.2 89 52.8
Cre02.g099850 Chlamydomonas reinhardtii HOM05D001355 ORTHO05D004435 5.8e-17 91.7 89 52.8
BcaC07g42258 Brassica carinata HOM05D001355 ORTHO05D004435 6.4e-16 88.2 90 51.1
Actinidia28086 Actinidia chinensis HOM05D001355 ORTHO05D004435 5.5e-15 85.1 78 61.5
CBR_g48779 Chara braunii HOM05D001355 ORTHO05D004435 5.5e-15 85.1 101 44.6
arahy.Tifrunner.gnm1.ann1.0U4Z5X Arachis hypogaea HOM05D001355 ORTHO05D004435 2.1e-14 83.2 92 51.1
AUR62016854 Chenopodium quinoa HOM05D001355 ORTHO05D004435 6.0e-14 81.6 82 56.1
RcHm_v2.0_Chr1g0334521 Rosa chinensis HOM05D001355 ORTHO05D004435 1.0e-13 80.9 88 51.1
BcaC07g42249 Brassica carinata HOM05D001355 ORTHO05D004435 1.3e-13 80.5 97 47.4
Oeu028218.1 Olea europaea HOM05D001355 ORTHO05D004435 1.8e-13 80.1 66 62.1
Nitab4.5_0000952g0060 Nicotiana tabacum HOM05D001355 ORTHO05D282947 2.3e-13 79.7 82 52.4
BcaB03g13555 Brassica carinata HOM05D001355 ORTHO05D010028 3.0e-13 79.3 80 53.8
Nn3g18802 Nelumbo nucifera HOM05D001355 ORTHO05D004435 3.3e-12 75.9 73 53.4
Nitab4.5_0000960g0170 Nicotiana tabacum HOM05D004107 ORTHO05D004738 5.6e-12 75.1 79 51.9
Nitab4.5_0000349g0030 Nicotiana tabacum HOM05D001355 ORTHO05D016189 9.0e-10 67.8 89 43.8
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 6.5e-08 61.6 106 41.5
Nitab4.5_0008254g0010 Nicotiana tabacum HOM05D017975 ORTHO05D016189 2.5e-07 59.7 89 42.7
Lj9A607T81 Lonicera japonica HOM05D001355 ORTHO05D016189 4.2e-07 58.9 54 57.4
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 2.1e-06 56.6 30 100.0


User provided reference genes

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