Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31753 Striga asiatica HOM05D001811 ORTHO05D399711 4.4e-158 561.2 278 100.0
SGA_v2.0_scaffold169G38676 Striga asiatica HOM05D001811 ORTHO05D001738 4.0e-18 96.3 117 47.9
TWI34G0918 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 1.3e-13 81.3 162 34.6
TWI63G1595 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 1.7e-13 80.9 162 34.6
Dinv23415 Davidia involucrata HOM05D001811 ORTHO05D001738 3.0e-13 80.1 106 44.3
MD08G1074500 Malus domestica HOM05D001811 ORTHO05D001738 1.5e-12 77.8 116 40.5
TAR636G0675 Trochodendron aralioides HOM05D001811 ORTHO05D001738 1.9e-12 77.4 165 33.9
Cpa.g.sc4219.1 Carica papaya HOM05D001811 ORTHO05D001738 2.5e-12 77.0 160 33.1
TWI32G0287 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 2.5e-12 77.0 121 40.5
Dinv27955 Davidia involucrata HOM05D001811 ORTHO05D001738 3.3e-12 76.6 106 42.5
MBI01_g10308_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 4.3e-12 76.3 246 27.6
Oeu064100.1 Olea europaea HOM05D001811 ORTHO05D001738 4.3e-12 76.3 106 41.5
Cc08_g10090 Coffea canephora HOM05D001811 ORTHO05D001738 5.6e-12 75.9 106 40.6
CSS0014115 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 9.5e-12 75.1 114 39.5
CAN.G309.60 Capsicum annuum HOM05D001811 ORTHO05D001738 9.5e-12 75.1 106 42.5
Migut.E01550 Erythranthe guttata HOM05D001811 ORTHO05D001738 1.2e-11 74.7 122 39.3
Oeu029399.1 Olea europaea HOM05D001811 ORTHO05D001738 1.2e-11 74.7 119 39.5
DCAR_004452 Daucus carota HOM05D001811 ORTHO05D001738 2.1e-11 73.9 106 41.5
MSTRG.1672 Avicennia marina HOM05D001811 ORTHO05D001738 2.8e-11 73.6 106 43.4
Lj7C695G10 Lonicera japonica HOM05D001811 ORTHO05D001738 3.6e-11 73.2 106 39.6
Nn6g35375 Nelumbo nucifera HOM05D001811 ORTHO05D001738 4.7e-11 72.8 178 31.5
PSO210G1442 Papaver somniferum HOM05D001811 ORTHO05D001738 4.7e-11 72.8 239 29.3
Peaxi162Scf00840g00115 Petunia axillaris HOM05D001811 ORTHO05D001738 4.7e-11 72.8 105 41.0
PGR031G3349 Punica granatum HOM05D001811 ORTHO05D001738 4.7e-11 72.8 113 38.9
GSVIVG01035335001 Vitis vinifera HOM05D001811 ORTHO05D001738 4.7e-11 72.8 185 29.2
Duzib187G1443 Durio zibethinus HOM05D001811 ORTHO05D001738 6.2e-11 72.4 159 32.7
Migut.A00162 Erythranthe guttata HOM05D001811 ORTHO05D001738 6.2e-11 72.4 119 39.5
Prupe.1G416200 Prunus persica HOM05D001811 ORTHO05D001738 6.2e-11 72.4 162 34.0
SGA_v2.0_scaffold251G45049 Striga asiatica HOM05D001811 ORTHO05D001738 6.2e-11 72.4 100 43.0
Actinidia18202 Actinidia chinensis HOM05D001811 ORTHO05D001738 8.0e-11 72.0 106 40.6
Lalb_Chr22g0355931 Lupinus albus HOM05D001811 ORTHO05D001738 8.0e-11 72.0 126 34.9
Nn8g38975 Nelumbo nucifera HOM05D001811 ORTHO05D001738 8.0e-11 72.0 122 38.5
Sc09g0009590 Simmondsia chinensis HOM05D001811 ORTHO05D001738 8.0e-11 72.0 116 40.5
COL.COLO4_21016 Corchorus olitorius HOM05D001811 ORTHO05D001738 1.1e-10 71.6 118 39.8
MD15G1062200 Malus domestica HOM05D001811 ORTHO05D001738 1.1e-10 71.6 111 39.6
MBI02_g35322_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 1.4e-10 71.2 106 40.6
vmacro05272 Vaccinium macrocarpon HOM05D001811 ORTHO05D001738 1.4e-10 71.2 100 41.0
Actinidia14696 Actinidia chinensis HOM05D001811 ORTHO05D001738 1.8e-10 70.9 106 39.6
Rhsim07G0144500 Rhododendron simsii HOM05D001811 ORTHO05D001738 1.8e-10 70.9 100 41.0
Thecc.09G050000 Theobroma cacao HOM05D001811 ORTHO05D001738 1.8e-10 70.9 120 40.0
Ciclev10007888m.g Citrus clementina HOM05D001811 ORTHO05D001738 2.3e-10 70.5 106 37.7
Lalb_Chr14g0367931 Lupinus albus HOM05D001811 ORTHO05D001738 2.3e-10 70.5 126 34.1
Manes.03G045900 Manihot esculenta HOM05D001811 ORTHO05D001738 2.3e-10 70.5 100 42.0
Peaxi162Scf00247g00515 Petunia axillaris HOM05D001811 ORTHO05D001738 5.2e-10 69.3 106 40.6
Lsat_1_v5_gn_5_47180 Lactuca sativa HOM05D001811 ORTHO05D001738 6.8e-10 68.9 123 39.0
BcaC04g19200 Brassica carinata HOM05D001811 ORTHO05D001738 8.9e-10 68.6 137 32.8
BolC9t59338H Brassica oleracea HOM05D001811 ORTHO05D001738 8.9e-10 68.6 137 32.8
CSS0025180 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 8.9e-10 68.6 100 40.0
Eucgr.C00627 Eucalyptus grandis HOM05D001811 ORTHO05D001738 1.2e-09 68.2 113 38.1
Aqoxy7G01347 Aquilegia oxysepala HOM05D001811 ORTHO05D001738 2.0e-09 67.4 105 41.9
CARHR201510 Cardamine hirsuta HOM05D001811 ORTHO05D001738 2.0e-09 67.4 164 33.5
Ca_13195_v3 Cicer arietinum L. HOM05D001811 ORTHO05D001738 2.0e-09 67.4 106 38.7
Sp6g31900 Schrenkiella parvula HOM05D001811 ORTHO05D001738 2.0e-09 67.4 145 33.8
TAR383G1022 Trochodendron aralioides HOM05D001811 ORTHO05D001738 2.0e-09 67.4 100 39.0
AL6G22440 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 2.6e-09 67.0 143 32.9
EL10Ac2g03951 Beta vulgaris HOM05D001811 ORTHO05D001738 2.6e-09 67.0 117 37.6
CiPaw.15G042800 Carya illinoinensis HOM05D001811 ORTHO05D001738 2.6e-09 67.0 94 44.7
Thhalv10013137m.g Eutrema salsugineum HOM05D001811 ORTHO05D001738 2.6e-09 67.0 145 33.8
PSO210G4589 Papaver somniferum HOM05D001811 ORTHO05D001738 2.6e-09 67.0 180 29.4
Solyc11g070110.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 2.6e-09 67.0 106 37.7
Sopen11g028780 Solanum pennellii HOM05D001811 ORTHO05D001738 2.6e-09 67.0 106 37.7
HPP92_007684 Vanilla planifolia HOM05D001811 ORTHO05D001738 2.6e-09 67.0 179 31.3
CsaV3_2G025780 Cucumis sativus L. HOM05D001811 ORTHO05D001738 3.4e-09 66.6 100 40.0
HanXRQChr13g0410631 Helianthus annuus HOM05D001811 ORTHO05D001738 4.4e-09 66.2 123 37.4
AT5G11710 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 5.8e-09 65.9 143 34.3
BcaNung02659 Brassica carinata HOM05D001811 ORTHO05D001738 5.8e-09 65.9 141 33.3
arahy.Tifrunner.gnm1.ann1.4L72G1 Arachis hypogaea HOM05D001811 ORTHO05D001738 7.5e-09 65.5 132 38.6
Carub.0006s1021 Capsella rubella HOM05D001811 ORTHO05D001738 7.5e-09 65.5 119 36.1
ClCG08G016840 Citrullus lanatus HOM05D001811 ORTHO05D001738 7.5e-09 65.5 121 34.7
Duzib168G1073 Durio zibethinus HOM05D001811 ORTHO05D001738 7.5e-09 65.5 114 38.6
PGSC0003DMG400018578 Solanum tuberosum HOM05D001811 ORTHO05D001738 7.5e-09 65.5 106 37.7
TPR.G13050 Trifolium pratense HOM05D001811 ORTHO05D001738 7.5e-09 65.5 106 39.6
BcaC03g13387 Brassica carinata HOM05D001811 ORTHO05D001738 9.8e-09 65.1 143 35.0
C02p05340 Brassica napus HOM05D001811 ORTHO05D001738 9.8e-09 65.1 143 35.0
BolC2t06482H Brassica oleracea HOM05D001811 ORTHO05D001738 9.8e-09 65.1 143 35.0
BraA10t44663Z Brassica rapa HOM05D001811 ORTHO05D001738 1.3e-08 64.7 132 32.6
Nitab4.5_0000664g0090 Nicotiana tabacum HOM05D001811 ORTHO05D001738 1.3e-08 64.7 106 39.6
Haze_18229 Corylus avellana HOM05D001811 ORTHO05D001738 1.7e-08 64.3 162 29.6
Gorai.009G047500 Gossypium raimondii HOM05D001811 ORTHO05D001738 1.7e-08 64.3 114 38.6
Atru.chr7.2033 Acer truncatum HOM05D001811 ORTHO05D001738 2.2e-08 63.9 107 36.4
A02p01150 Brassica napus HOM05D001811 ORTHO05D001738 2.2e-08 63.9 144 35.4
BraA02t05094Z Brassica rapa HOM05D001811 ORTHO05D001738 2.2e-08 63.9 144 35.4
CANSAT25G2568 Cannabis sativa HOM05D001811 ORTHO05D001738 2.2e-08 63.9 133 32.3
CiPaw.16G030700 Carya illinoinensis HOM05D001811 ORTHO05D001738 2.2e-08 63.9 92 40.2
SalBow4G1043 Salvia bowleyana HOM05D001811 ORTHO05D001738 2.2e-08 63.9 106 38.7
Hund03368 Selenicereus undatus HOM05D001811 ORTHO05D001738 2.2e-08 63.9 116 33.6
MELO3C010772.2 Cucumis melo HOM05D001811 ORTHO05D001738 2.9e-08 63.5 89 40.4
Solyc08g065890.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 3.7e-08 63.2 107 37.4
Sopen08g019590 Solanum pennellii HOM05D001811 ORTHO05D001738 3.7e-08 63.2 107 37.4
arahy.Tifrunner.gnm1.ann1.ZC4720 Arachis hypogaea HOM05D001811 ORTHO05D001738 4.9e-08 62.8 89 41.6
ECA240G3342 Erigeron canadensis HOM05D001811 ORTHO05D001738 4.9e-08 62.8 122 34.4
Gohir.A05G044500 Gossypium hirsutum HOM05D001811 ORTHO05D001738 4.9e-08 62.8 114 38.6
HanXRQChr03g0078751 Helianthus annuus HOM05D001811 ORTHO05D001738 4.9e-08 62.8 106 38.7
CAN.G20.7 Capsicum annuum HOM05D001811 ORTHO05D001738 6.4e-08 62.4 107 37.4
Cfa017920 Carpinus fangiana HOM05D001811 ORTHO05D001738 6.4e-08 62.4 115 36.5
RcHm_v2.0_Chr6g0310371 Rosa chinensis HOM05D001811 ORTHO05D001738 6.4e-08 62.4 88 40.9
FvH4_2g32320 Fragaria vesca HOM05D001811 ORTHO05D001738 1.1e-07 61.6 128 37.5
FAN20G0968 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-07 61.6 128 37.5
FAN24G0718 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-07 61.6 128 37.5
Medtr1g016980 Medicago truncatula HOM05D001811 ORTHO05D001738 1.4e-07 61.2 106 36.8
Sed0009852 Sechium edule HOM05D001811 ORTHO05D001738 1.4e-07 61.2 89 40.4
FAN27G1939 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.9e-07 60.8 128 36.7
FAN15G1805 Fragaria x ananassa HOM05D001811 ORTHO05D001738 2.4e-07 60.5 114 35.1
Glyma.14G091600 Glycine max HOM05D001811 ORTHO05D001738 2.4e-07 60.5 88 40.9
Glyma.17G231800 Glycine max HOM05D001811 ORTHO05D001738 2.4e-07 60.5 88 40.9
Lj5g0013160 Lotus japonicus HOM05D001811 ORTHO05D001738 2.4e-07 60.5 118 36.4
Psat6g019160 Pisum sativum HOM05D001811 ORTHO05D001738 2.4e-07 60.5 90 44.4
C09p65090 Brassica napus HOM05D000178 ORTHO05D001738 3.2e-07 60.1 137 30.7
Gohir.D05G046100 Gossypium hirsutum HOM05D001811 ORTHO05D001738 3.2e-07 60.1 114 36.8
SHI18698 Sapria himalayana HOM05D001811 ORTHO05D001738 3.2e-07 60.1 178 29.2
VMungo0647G1040 Vigna mungo HOM05D001811 ORTHO05D001738 3.2e-07 60.1 107 40.2
QL02p001781 Quercus lobata HOM05D001811 ORTHO05D001738 5.4e-07 59.3 129 33.3
Phvul.001G032700 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 7.1e-07 58.9 88 43.2
Aa31LG3G15490 Aethionema arabicum HOM05D001811 ORTHO05D001738 9.2e-07 58.5 143 30.8
Aa31LG3G15450 Aethionema arabicum HOM05D001811 ORTHO05D001738 1.6e-06 57.8 117 33.3
AUR62009207 Chenopodium quinoa HOM05D001811 ORTHO05D001738 1.6e-06 57.8 117 33.3
Nitab4.5_0000359g0230 Nicotiana tabacum HOM05D001811 ORTHO05D001738 2.7e-06 57.0 129 31.8
Sabra06G0182300 Salix brachista HOM05D001811 ORTHO05D001738 2.7e-06 57.0 116 33.6
THA.LOC104811257 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 2.7e-06 57.0 122 33.6
AUR62040204 Chenopodium quinoa HOM05D001811 ORTHO05D001738 3.5e-06 56.6 112 34.8
CDE06G0616 Ceratophyllum demersum HOM05D001811 ORTHO05D001738 7.8e-06 55.5 181 28.2


User provided reference genes

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