Gene: COL.COLO4_21016

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_21016
  • Transcript Identifier COL.rna19773
  • Gene Type Coding gene
  • Location AWUE01017547.1 : 3727-7661 : positive

Gene Family Information

  • ID HOM05D001811
  • #Genes/#Species 361/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna19773
  • GenBank OMO86605.1
  • id gene20988
  • gene_name COLO4_21016
  • uniprot A0A1R3IVJ9

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006623
IEA
GOA Databaseprotein targeting to vacuole
GO:0006623
IEA
InterProprotein targeting to vacuole
GO:0072659
ISO
PLAZA Integrative Orthologyprotein localization to plasma membrane AT5G11710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030276
IEA
GOA Databaseclathrin binding
GO:0030276
IEA
InterProclathrin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G11710
GO:0002020
ISO
PLAZA Integrative Orthologyprotease binding AT5G11710
GO:0005543
ISO
PLAZA Integrative Orthologyphospholipid binding AT5G11710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030136
IEA
GOA Databaseclathrin-coated vesicle
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G11710
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G11710
GO:0005884
ISO
PLAZA Integrative Orthologyactin filament AT5G11710
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G11710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013809 ENTH domain
IPR008942 ENTH/VHS
IPR033521 Clathrin interactor EPSIN 1
Mapman id Description
35.1 not assigned.annotated