Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 5.1e-281 970.3 455 100.0
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 1.5e-192 676.4 461 70.7
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 7.6e-184 647.5 463 68.9
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 1.7e-175 619.8 391 73.7
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.4e-166 590.1 432 63.7
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 6.0e-165 584.7 455 62.4
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 1.3e-164 583.6 443 62.3
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 5.1e-164 581.6 390 68.2
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 1.1e-163 580.5 391 68.5
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 1.1e-163 580.5 461 62.3
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 8.2e-162 574.3 386 68.1
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 1.2e-160 570.5 385 68.1
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 2.6e-160 569.3 386 66.8
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 1.0e-159 567.4 386 67.4
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 1.7e-159 566.6 388 66.8
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 1.7e-159 566.6 424 63.2
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 2.2e-159 566.2 385 67.5
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 5.0e-159 565.1 406 63.8
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 6.5e-159 564.7 386 66.8
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 2.5e-158 562.8 434 60.4
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 2.5e-158 562.8 384 67.7
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 4.2e-158 562.0 433 62.6
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 4.2e-158 562.0 442 61.5
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 4.2e-158 562.0 387 66.9
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 5.5e-158 561.6 387 65.1
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 5.5e-158 561.6 383 66.8
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 7.2e-158 561.2 399 64.7
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 1.2e-157 560.5 455 59.3
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.6e-157 560.1 400 63.8
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 2.1e-157 559.7 391 65.0
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 2.7e-157 559.3 431 61.3
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 1.3e-156 557.0 399 64.4
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 2.3e-156 556.2 383 66.6
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 3.0e-156 555.8 429 61.8
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 6.7e-156 554.7 433 60.3
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 6.7e-156 554.7 383 66.3
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 1.3e-154 550.4 385 64.7
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.7e-154 550.1 410 62.0
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 2.2e-154 549.7 401 63.3
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.8e-154 549.3 412 62.4
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.7e-154 548.9 385 64.9
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 4.8e-154 548.5 386 64.5
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 8.2e-154 547.7 429 61.1
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 1.8e-153 546.6 457 57.3
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.8e-153 546.6 414 62.6
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 4.1e-153 545.4 388 65.2
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 4.1e-153 545.4 384 65.1
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 6.9e-153 544.7 388 63.7
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 6.9e-153 544.7 399 62.4
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 1.5e-152 543.5 386 64.2
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 2.0e-152 543.1 388 64.4
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 2.6e-152 542.7 388 64.4
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 3.4e-152 542.3 393 62.3
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 3.4e-152 542.3 401 62.3
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 5.9e-152 541.6 528 52.1
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 7.7e-152 541.2 388 63.7
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 7.7e-152 541.2 386 63.5
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.0e-151 540.8 385 64.2
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.3e-151 540.4 418 59.1
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 1.7e-151 540.0 414 62.3
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 8.5e-151 537.7 416 60.8
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 1.4e-150 537.0 386 64.5
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.9e-150 536.6 414 61.6
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.2e-150 535.8 414 61.8
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 2.7e-149 532.7 433 57.5
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 2.7e-149 532.7 403 62.8
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 4.7e-149 531.9 401 61.3
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 7.9e-149 531.2 394 61.7
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 1.8e-148 530.0 410 59.0
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 2.3e-148 529.6 432 57.9
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 2.3e-148 529.6 402 60.7
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 3.9e-148 528.9 394 63.2
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 1.1e-147 527.3 435 57.5
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 1.1e-147 527.3 398 60.8
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 9.7e-147 524.2 424 58.7
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 2.2e-146 523.1 390 62.6
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 9.1e-145 517.7 393 63.1
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 2.6e-144 516.2 409 59.2
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 4.5e-144 515.4 387 62.8
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 4.5e-144 515.4 382 63.6
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 1.9e-142 510.0 413 59.1
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 2.5e-142 509.6 396 60.4
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 9.4e-142 507.7 386 60.4
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 3.6e-141 505.8 356 66.6
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 7.4e-139 498.0 405 60.2
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 4.8e-138 495.4 367 62.9
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.4e-137 493.0 408 58.1
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 3.5e-136 489.2 386 61.9
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 5.2e-132 475.3 386 57.8
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 2.8e-130 469.5 354 61.6
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 6.3e-130 468.4 350 61.7
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 5.3e-129 465.3 379 58.8
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 6.5e-127 458.4 318 64.8
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 5.5e-126 455.3 327 65.4
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 5.2e-124 448.7 394 53.6
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.5e-123 447.2 341 59.8
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.3e-122 444.1 304 66.1
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 1.9e-118 430.3 434 49.3
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.3e-118 429.5 409 48.9
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.6e-117 427.2 409 48.7
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 1.5e-110 404.1 291 61.9
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 1.7e-106 390.6 399 47.1
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 1.2e-93 347.8 279 59.9
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 3.6e-93 346.3 238 66.4
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 8.9e-92 341.7 293 56.7
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 1.2e-88 331.3 387 45.7
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 6.0e-72 275.8 340 45.3
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 5.1e-71 272.7 402 38.8
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 1.5e-67 261.2 253 53.8
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 5.8e-59 232.6 199 55.3
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 5.8e-59 232.6 483 31.9
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 2.9e-50 203.8 207 48.8
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.3e-47 194.9 247 42.1
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.4e-41 174.9 126 61.1
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.1e-30 138.7 102 57.8
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 7.4e-22 109.4 204 33.3
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.7e-18 98.2 81 59.3
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 4.2e-17 93.6 63 66.7
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.6e-16 91.7 61 68.9
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 4.7e-16 90.1 72 55.6
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.4e-15 88.6 60 66.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 1.4e-15 88.6 61 67.2
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 1.2e-11 75.5 51 68.6
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 4.5e-11 73.6 87 39.1
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 3.2e-09 67.4 42 66.7


User provided reference genes

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