Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold112G31629 Striga asiatica HOM05D001977 ORTHO05D002246 2.0e-104 382.5 196 100.0
SGA_v2.0_scaffold11G05700 Striga asiatica HOM05D001977 ORTHO05D002246 1.2e-74 283.5 171 86.0
SGA_v2.0_scaffold43G16387 Striga asiatica HOM05D001977 ORTHO05D002246 3.0e-52 209.1 183 63.9
MSTRG.4828 Avicennia marina HOM05D001977 ORTHO05D002246 1.1e-38 164.1 194 54.1
MSTRG.20874 Avicennia marina HOM05D001977 ORTHO05D002246 1.3e-34 150.6 188 50.0
SalBow5G5061 Salvia bowleyana HOM05D001977 ORTHO05D002246 1.2e-32 144.1 186 50.0
Oeu004919.1 Olea europaea HOM05D001977 ORTHO05D002246 9.9e-32 141.0 157 51.6
Dinv43879 Davidia involucrata HOM05D001977 ORTHO05D002246 1.4e-30 137.1 174 52.9
Dinv32535 Davidia involucrata HOM05D001977 ORTHO05D002246 1.9e-30 136.7 160 55.6
Migut.N01578 Erythranthe guttata HOM05D001977 ORTHO05D002246 2.7e-29 132.9 187 44.9
SalBow3G1047 Salvia bowleyana HOM05D001977 ORTHO05D002246 4.6e-29 132.1 150 48.7
Hma1.2p1_0783F.1_g217010 Hydrangea macrophylla HOM05D001977 ORTHO05D002246 6.0e-29 131.7 160 54.4
Solyc01g095300.3 Solanum lycopersicum HOM05D001977 ORTHO05D002246 1.3e-28 130.6 195 45.6
CSS0026488 Camellia sinensis var. sinensis HOM05D001977 ORTHO05D002246 1.1e-27 127.5 161 54.0
CSS0043665 Camellia sinensis var. sinensis HOM05D001977 ORTHO05D002246 1.1e-27 127.5 161 54.0
CAN.G78.143 Capsicum annuum HOM05D001977 ORTHO05D002246 1.5e-27 127.1 160 50.6
Actinidia10087 Actinidia chinensis HOM05D001977 ORTHO05D002246 4.3e-27 125.6 163 53.4
Nitab4.5_0004748g0030 Nicotiana tabacum HOM05D001977 ORTHO05D002246 4.3e-27 125.6 159 50.3
CSS0023193 Camellia sinensis var. sinensis HOM05D001977 ORTHO05D002246 3.1e-25 119.4 160 51.9
Nitab4.5_0000305g0380 Nicotiana tabacum HOM05D001977 ORTHO05D002246 5.3e-25 118.6 160 48.1
ClCG06G003320 Citrullus lanatus HOM05D001977 ORTHO05D002246 9.0e-25 117.9 174 47.7
CsaV3_6G000960 Cucumis sativus L. HOM05D001977 ORTHO05D002246 9.0e-25 117.9 174 47.7
Manes.05G027800 Manihot esculenta HOM05D001977 ORTHO05D002246 9.0e-25 117.9 161 51.6
Migut.B01815 Erythranthe guttata HOM05D001977 ORTHO05D002246 4.5e-24 115.5 171 45.6
Peaxi162Scf01254g00029 Petunia axillaris HOM05D001977 ORTHO05D002246 5.8e-24 115.2 157 47.8
Rhsim07G0008900 Rhododendron simsii HOM05D001977 ORTHO05D002246 7.6e-24 114.8 174 47.7
vmacro20876 Vaccinium macrocarpon HOM05D001977 ORTHO05D002246 7.6e-24 114.8 160 48.1
DCAR_006957 Daucus carota HOM05D001977 ORTHO05D002246 1.0e-23 114.4 161 49.7
MELO3C021173.2 Cucumis melo HOM05D001977 ORTHO05D002246 1.3e-23 114.0 174 45.4
Prupe.2G179800 Prunus persica HOM05D001977 ORTHO05D002246 3.8e-23 112.5 175 47.4
RcHm_v2.0_Chr1g0358361 Rosa chinensis HOM05D001977 ORTHO05D002246 1.4e-22 110.5 169 47.3
CiPaw.02G037200 Carya illinoinensis HOM05D001977 ORTHO05D002246 1.9e-22 110.2 188 42.0
FAN01G0097 Fragaria x ananassa HOM05D001977 ORTHO05D002246 1.9e-22 110.2 169 44.4
Sed0012656 Sechium edule HOM05D001977 ORTHO05D002246 1.9e-22 110.2 174 45.4
FvH4_7g15660 Fragaria vesca HOM05D001977 ORTHO05D002246 2.5e-22 109.8 169 44.4
FAN03G1732 Fragaria x ananassa HOM05D001977 ORTHO05D002246 2.5e-22 109.8 169 45.0
FAN10G0843 Fragaria x ananassa HOM05D001977 ORTHO05D002246 2.5e-22 109.8 169 44.4
FAN10G4099 Fragaria x ananassa HOM05D001977 ORTHO05D002246 2.5e-22 109.8 169 44.4
FAN06G3444 Fragaria x ananassa HOM05D001977 ORTHO05D002246 3.2e-22 109.4 169 44.4
QL04p058948 Quercus lobata HOM05D001977 ORTHO05D002246 3.2e-22 109.4 179 44.7
Manes.01G251000 Manihot esculenta HOM05D001977 ORTHO05D002246 5.5e-22 108.6 159 49.1
CiPaw.01G069600 Carya illinoinensis HOM05D001977 ORTHO05D002246 7.1e-22 108.2 176 44.3
FAN06G3533 Fragaria x ananassa HOM05D001977 ORTHO05D002246 7.1e-22 108.2 169 43.8
Ciclev10018649m.g Citrus clementina HOM05D001977 ORTHO05D002246 9.3e-22 107.8 163 50.3
MD01G1073400 Malus domestica HOM05D001977 ORTHO05D002246 1.6e-21 107.1 173 45.1
vmacro13214 Vaccinium macrocarpon HOM05D001977 ORTHO05D002246 2.7e-21 106.3 157 47.1
Cc02_g38760 Coffea canephora HOM05D001977 ORTHO05D002246 3.5e-21 105.9 159 47.8
Atru.chr5.605 Acer truncatum HOM05D001977 ORTHO05D002246 7.9e-21 104.8 162 48.8
Cpa.g.sc184.12 Carica papaya HOM05D001977 ORTHO05D002246 1.3e-20 104.0 175 45.7
Sed0009109 Sechium edule HOM05D001977 ORTHO05D002246 1.8e-20 103.6 174 43.7
Gohir.D08G148600 Gossypium hirsutum HOM05D001977 ORTHO05D002246 3.0e-20 102.8 191 42.4
Gorai.004G154300 Gossypium raimondii HOM05D001977 ORTHO05D002246 3.0e-20 102.8 191 42.4
Lsat_1_v5_gn_4_34080 Lactuca sativa HOM05D001977 ORTHO05D002246 3.9e-20 102.4 189 44.4
Gohir.A08G127200 Gossypium hirsutum HOM05D001977 ORTHO05D002246 1.1e-19 100.9 191 42.4
CANSAT56G4081 Cannabis sativa HOM05D001977 ORTHO05D002246 2.5e-19 99.8 187 40.1
HanXRQChr16g0523821 Helianthus annuus HOM05D001977 ORTHO05D002246 7.4e-19 98.2 193 42.0
TWI23G0084 Tripterygium wilfordii HOM05D001977 ORTHO05D002246 9.7e-19 97.8 157 44.6
GSVIVG01027020001 Vitis vinifera HOM05D001977 ORTHO05D002246 9.7e-19 97.8 160 45.0
Ah.05g180050 Amaranthus hybridus HOM05D001977 ORTHO05D002246 1.3e-18 97.4 199 35.7
Potri.002G166100 Populus trichocarpa HOM05D001977 ORTHO05D002246 1.3e-18 97.4 163 45.4
AUR62022635 Chenopodium quinoa HOM05D001977 ORTHO05D002246 1.6e-18 97.1 157 43.9
Sabra02G0145500 Salix brachista HOM05D001977 ORTHO05D002246 1.6e-18 97.1 162 46.3
Nn1g01751 Nelumbo nucifera HOM05D001977 ORTHO05D002246 6.3e-18 95.1 191 41.9
Rhsim01G0168400 Rhododendron simsii HOM05D001977 ORTHO05D002246 6.3e-18 95.1 160 43.1
Sc01g0003110 Simmondsia chinensis HOM05D001977 ORTHO05D002246 6.3e-18 95.1 157 41.4
Thecc.01G350000 Theobroma cacao HOM05D001977 ORTHO05D002246 1.1e-17 94.4 163 44.2
EL10Ac1g00336 Beta vulgaris HOM05D001977 ORTHO05D002246 1.4e-17 94.0 158 43.0
Potri.014G092500 Populus trichocarpa HOM05D001977 ORTHO05D002246 1.8e-17 93.6 177 41.2
Cfa003855 Carpinus fangiana HOM05D001977 ORTHO05D002246 3.1e-17 92.8 185 40.0
Duzib133G0786 Durio zibethinus HOM05D001977 ORTHO05D002246 5.3e-17 92.0 163 42.9
Sabra14G0067100 Salix brachista HOM05D001977 ORTHO05D002246 6.9e-17 91.7 163 41.7
Aqoxy5G04047 Aquilegia oxysepala HOM05D001977 ORTHO05D002246 1.2e-16 90.9 174 44.8
Duzib138G0834 Durio zibethinus HOM05D001977 ORTHO05D002246 1.2e-16 90.9 163 42.9
Gohir.A11G093200 Gossypium hirsutum HOM05D001977 ORTHO05D002246 3.4e-16 89.4 189 38.1
Gohir.D11G098100 Gossypium hirsutum HOM05D001977 ORTHO05D002246 5.9e-16 88.6 189 38.1
Gorai.007G104300 Gossypium raimondii HOM05D001977 ORTHO05D002246 7.7e-16 88.2 189 38.1
Lsat_1_v5_gn_3_138461 Lactuca sativa HOM05D001977 ORTHO05D002246 1.3e-15 87.4 158 41.8
THA.LOC104801379 Tarenaya hassleriana HOM05D001977 ORTHO05D002246 1.7e-15 87.0 162 41.4
HanXRQChr17g0562251 Helianthus annuus HOM05D001977 ORTHO05D002246 6.5e-15 85.1 195 39.0
Haze_15594 Corylus avellana HOM05D001977 ORTHO05D002246 1.4e-14 84.0 185 35.7
Thhalv10028385m.g Eutrema salsugineum HOM05D001977 ORTHO05D002246 2.5e-14 83.2 162 40.7
TAR375G0481 Trochodendron aralioides HOM05D001977 ORTHO05D002246 2.5e-14 83.2 137 46.7
Hund27234 Selenicereus undatus HOM05D001977 ORTHO05D002246 4.2e-14 82.4 157 39.5
PSO170G3647 Papaver somniferum HOM05D001977 ORTHO05D002246 7.2e-14 81.6 197 36.5
Oeu022857.1 Olea europaea HOM05D001977 ORTHO05D002246 2.1e-13 80.1 185 36.2
CARHR249090 Cardamine hirsuta HOM05D001977 ORTHO05D002246 4.6e-13 79.0 177 35.6
PSO063G6918 Papaver somniferum HOM05D001977 ORTHO05D002246 4.6e-13 79.0 178 38.8
BcaB01g02326 Brassica carinata HOM05D001977 ORTHO05D002246 1.0e-12 77.8 162 38.3
Hund16682 Selenicereus undatus HOM05D001977 ORTHO05D002246 1.0e-12 77.8 176 35.8
AL6G52170 Arabidopsis lyrata HOM05D001977 ORTHO05D002246 1.4e-12 77.4 174 36.8
BcaC01g06850 Brassica carinata HOM05D001977 ORTHO05D002246 2.3e-12 76.6 165 36.4
Carub.0006s3625 Capsella rubella HOM05D001977 ORTHO05D002246 2.3e-12 76.6 184 34.8
THA.LOC104825864 Tarenaya hassleriana HOM05D001977 ORTHO05D002246 3.0e-12 76.3 129 39.5
C03p38950 Brassica napus HOM05D001977 ORTHO05D002246 8.8e-12 74.7 165 35.8
BolC3t16167H Brassica oleracea HOM05D001977 ORTHO05D002246 8.8e-12 74.7 165 35.8
Lj9C594T10 Lonicera japonica HOM05D001977 ORTHO05D002246 8.8e-12 74.7 91 47.3
Sp6g00910 Schrenkiella parvula HOM05D001977 ORTHO05D002246 1.1e-11 74.3 163 38.0
BraA09t35742Z Brassica rapa HOM05D001977 ORTHO05D002246 2.0e-11 73.6 162 37.7
AT4G01210 Arabidopsis thaliana HOM05D001977 ORTHO05D002246 4.3e-11 72.4 175 35.4
A09p00140 Brassica napus HOM05D001977 ORTHO05D002246 4.3e-11 72.4 162 37.0
Glyma.07G062100 Glycine max HOM05D001977 ORTHO05D002246 5.7e-11 72.0 187 35.3
PGR042G1970 Punica granatum HOM05D001977 ORTHO05D002246 7.4e-11 71.6 190 37.4
BraA03t12365Z Brassica rapa HOM05D001977 ORTHO05D002246 1.3e-10 70.9 163 38.7
HanXRQChr06g0166941 Helianthus annuus HOM05D001977 ORTHO05D002246 2.8e-10 69.7 159 39.6
Lj7C505G15 Lonicera japonica HOM05D001977 ORTHO05D002246 3.7e-10 69.3 158 38.6
Phvul.010G105900 Phaseolus vulgaris HOM05D001977 ORTHO05D002246 6.3e-10 68.6 187 33.7
A03p31930 Brassica napus HOM05D001977 ORTHO05D002246 8.2e-10 68.2 163 38.0
BolC9t53010H Brassica oleracea HOM05D001977 ORTHO05D002246 1.4e-09 67.4 161 33.5
Aa31LG5G800 Aethionema arabicum HOM05D001977 ORTHO05D002246 4.1e-09 65.9 162 38.9
BcaC04g24132 Brassica carinata HOM05D001977 ORTHO05D002246 9.1e-09 64.7 187 34.2
Eucgr.E00083 Eucalyptus grandis HOM05D001977 ORTHO05D002246 9.1e-09 64.7 159 34.6
Glyma.16G030100 Glycine max HOM05D001977 ORTHO05D002246 9.1e-09 64.7 164 37.8
C09p00760 Brassica napus HOM05D001977 ORTHO05D002246 1.5e-08 63.9 162 37.0
Lj3C337T0 Lonicera japonica HOM05D001977 ORTHO05D002246 1.5e-08 63.9 92 45.7
Medtr8g028395 Medicago truncatula HOM05D001977 ORTHO05D002246 1.5e-08 63.9 194 33.5
Ca_30879_v3 Cicer arietinum L. HOM05D001977 ORTHO05D002246 5.9e-08 62.0 191 35.6
arahy.Tifrunner.gnm1.ann1.X5BQMH Arachis hypogaea HOM05D001977 ORTHO05D002246 1.0e-07 61.2 193 36.3
Lj3g0010045 Lotus japonicus HOM05D001977 ORTHO05D002246 1.0e-07 61.2 157 38.9
unitig_62.g23805 Utricularia gibba HOM05D001977 ORTHO05D002246 1.0e-07 61.2 171 32.2
ATR0109G019 Amborella trichopoda HOM05D001977 ORTHO05D002246 1.3e-07 60.8 204 29.9
Psat4g157160 Pisum sativum HOM05D001977 ORTHO05D002246 1.3e-07 60.8 184 36.4
AUR62004428 Chenopodium quinoa HOM05D001977 ORTHO05D002246 2.2e-07 60.1 77 42.9
arahy.Tifrunner.gnm1.ann1.VW0VG8 Arachis hypogaea HOM05D001977 ORTHO05D002246 5.0e-07 58.9 166 38.0
TWI14G0955 Tripterygium wilfordii HOM05D001977 ORTHO05D002246 5.0e-07 58.9 137 34.3
Lalb_Chr10g0096531 Lupinus albus HOM05D001977 ORTHO05D002246 1.4e-06 57.4 159 37.1
TPR.G18147 Trifolium pratense HOM05D001977 ORTHO05D002246 5.5e-06 55.5 185 33.5
Lalb_Chr17g0338911 Lupinus albus HOM05D001977 ORTHO05D002246 9.4e-06 54.7 161 38.5


User provided reference genes

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