Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 6.3e-54 213.8 102 100.0
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 1.5e-31 139.4 101 65.3
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 4.4e-31 137.9 89 71.9
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 1.3e-30 136.3 88 71.6
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 8.3e-30 133.7 99 66.7
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 8.3e-30 133.7 99 66.7
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 8.3e-30 133.7 99 66.7
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 8.3e-30 133.7 90 70.0
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 7.0e-29 130.6 92 67.4
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 7.0e-29 130.6 88 70.5
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 7.0e-29 130.6 88 70.5
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 1.2e-28 129.8 88 68.2
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 2.7e-28 128.6 87 69.0
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 5.9e-28 127.5 88 67.0
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.0e-27 126.7 87 66.7
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 1.3e-27 126.3 96 62.5
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.3e-27 126.3 88 65.9
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 1.3e-27 126.3 88 68.2
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.3e-27 126.3 99 62.6
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 1.7e-27 125.9 88 67.0
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 2.3e-27 125.6 87 64.4
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 2.9e-27 125.2 88 65.9
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 2.9e-27 125.2 89 65.2
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 3.8e-27 124.8 84 67.9
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 5.0e-27 124.4 87 69.0
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.1e-26 123.2 92 65.2
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 1.1e-26 123.2 88 68.2
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 1.5e-26 122.9 88 63.6
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.9e-26 122.5 88 68.2
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 1.9e-26 122.5 88 67.0
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.9e-26 122.5 87 67.8
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 2.5e-26 122.1 88 64.8
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 4.2e-26 121.3 96 60.4
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 4.2e-26 121.3 96 59.4
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 5.5e-26 120.9 87 63.2
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 5.5e-26 120.9 90 61.1
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 5.5e-26 120.9 84 65.5
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 9.5e-26 120.2 84 65.5
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.2e-25 119.8 96 58.3
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 2.1e-25 119.0 90 65.6
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 2.1e-25 119.0 85 65.9
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 2.1e-25 119.0 84 64.3
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 2.1e-25 119.0 84 64.3
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 2.1e-25 119.0 87 60.9
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.8e-25 118.6 85 65.9
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.8e-25 118.6 85 65.9
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.8e-25 118.6 85 65.9
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 6.1e-25 117.5 87 63.2
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 8.0e-25 117.1 84 64.3
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 1.0e-24 116.7 139 46.0
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 2.3e-24 115.5 95 60.0
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 3.0e-24 115.2 95 58.9
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 4.0e-24 114.8 95 58.9
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 4.0e-24 114.8 69 75.4
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 5.2e-24 114.4 95 58.9
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 5.2e-24 114.4 91 60.4
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 6.8e-24 114.0 88 64.8
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 8.9e-24 113.6 95 57.9
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 8.9e-24 113.6 94 55.3
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 2.6e-23 112.1 87 62.1
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 2.6e-23 112.1 98 57.1
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 63.6
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 63.6
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 63.6
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 63.6
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 63.6
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 4.4e-23 111.3 88 62.5
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 4.4e-23 111.3 87 62.1
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 5.7e-23 110.9 69 71.0
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 7.5e-23 110.5 78 64.1
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 9.8e-23 110.2 96 54.2
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 9.8e-23 110.2 87 60.9
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.7e-22 109.4 92 53.3
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.7e-22 109.4 87 59.8
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.9e-22 107.8 93 57.0
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 8.3e-22 107.1 87 56.3
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 8.3e-22 107.1 91 57.1
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 1.4e-21 106.3 77 62.3
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 9.2e-21 103.6 87 57.5
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 2.0e-20 102.4 90 58.9
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 2.0e-20 102.4 128 44.5
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 1.0e-19 100.1 83 60.2
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 1.1e-18 96.7 87 56.3
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.9e-18 95.9 86 58.1
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 2.5e-18 95.5 80 61.2
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 3.3e-18 95.1 98 51.0
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 3.3e-18 95.1 84 57.1
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 5.6e-18 94.4 73 61.6
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 2.8e-17 92.0 159 37.1
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 2.8e-17 92.0 85 55.3
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 8.0e-17 90.5 63 66.7
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 1.4e-16 89.7 75 57.3
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 5.2e-16 87.8 51 80.4
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 6.8e-16 87.4 46 84.8
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 1.2e-15 86.7 46 78.3
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 2.0e-15 85.9 63 61.9
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 5.4e-13 77.8 65 56.9
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 4.6e-12 74.7 62 58.1
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 4.6e-12 74.7 46 63.0
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 1.7e-11 72.8 70 50.0
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 5.0e-11 71.2 64 57.8
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 5.0e-11 71.2 59 61.0
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 6.4e-06 54.3 45 57.8


User provided reference genes

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