Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 6.2e-154 547.4 263 100.0
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 4.2e-25 119.4 100 51.0
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 2.7e-24 116.7 146 41.1
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 8.7e-23 111.7 98 44.9
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 1.5e-22 110.9 88 51.1
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 3.6e-21 106.3 197 32.0
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-20 104.4 100 43.0
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-20 102.8 185 29.7
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 1.5e-19 100.9 178 33.7
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 4.5e-19 99.4 100 40.0
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 5.8e-19 99.0 98 40.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.4e-18 95.5 98 41.8
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 8.4e-18 95.1 156 29.5
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 1.1e-17 94.7 100 40.0
SGA_v2.0_scaffold40G15459 Striga asiatica HOM05D000090 ORTHO05D000083 1.1e-17 94.7 152 32.2
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 4.2e-17 92.8 117 40.2
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 7.1e-17 92.0 178 27.5
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 9.3e-17 91.7 98 37.8
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 2.1e-16 90.5 131 35.9
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 2.7e-16 90.1 98 37.8
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 4.6e-16 89.4 91 38.5
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 7.9e-16 88.6 165 32.7
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 2.3e-15 87.0 130 36.2
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.3e-15 87.0 102 37.3
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-15 86.3 110 37.3
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 6.7e-15 85.5 97 38.1
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 8.7e-15 85.1 100 40.0
SGA_v2.0_scaffold170G38754 Striga asiatica HOM05D010565 ORTHO05D011213 1.9e-14 84.0 89 38.2
SGA_v2.0_scaffold19G08782 Striga asiatica HOM05D010565 ORTHO05D011213 1.9e-14 84.0 89 38.2
SGA_v2.0_scaffold1G00691 Striga asiatica HOM05D010565 ORTHO05D011213 1.9e-14 84.0 89 38.2
SGA_v2.0_scaffold202G41432 Striga asiatica HOM05D010565 ORTHO05D011213 4.3e-14 82.8 89 37.1
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 5.6e-14 82.4 87 39.1
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 2.8e-13 80.1 209 26.3
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 3.1e-12 76.6 78 35.9
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 2.6e-11 73.6 157 29.9
SGA_v2.0_scaffold424G51472 Striga asiatica HOM05D000003 ORTHO05D011213 3.4e-11 73.2 150 28.0
SGA_v2.0_scaffold78G25376 Striga asiatica HOM05D010565 ORTHO05D405841 1.7e-10 70.9 61 45.9
SGA_v2.0_scaffold22G09837 Striga asiatica HOM05D010565 ORTHO05D011213 6.4e-10 68.9 78 38.5
SGA_v2.0_scaffold259G45830 Striga asiatica HOM05D010565 ORTHO05D011213 1.1e-09 68.2 53 52.8
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 3.2e-09 66.6 67 38.8
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 5.5e-09 65.9 189 25.9
Cc09_g02940 Coffea canephora HOM05D007931 ORTHO05D011213 7.1e-09 65.5 78 35.9
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 2.1e-08 63.9 100 30.0
COL.COLO4_10073 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.5e-08 63.2 97 30.9
SGA_v2.0_scaffold212G42204 Striga asiatica HOM05D009140 ORTHO05D011213 3.5e-08 63.2 120 30.8
SGA_v2.0_scaffold215G42323 Striga asiatica HOM05D008147 ORTHO05D010215 6.0e-08 62.4 158 30.4
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.9e-08 62.0 101 29.7
SGA_v2.0_scaffold61G21170 Striga asiatica HOM05D009140 ORTHO05D010215 1.3e-07 61.2 145 28.3
SGA_v2.0_scaffold43G16267 Striga asiatica HOM05D001376 ORTHO05D003384 8.7e-07 58.5 74 33.8
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 8.7e-07 58.5 141 27.7
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 1.1e-06 58.2 53 45.3
SGA_v2.0_scaffold118G32508 Striga asiatica HOM05D010565 ORTHO05D011213 1.5e-06 57.8 155 25.2
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-06 57.8 163 27.0
SGA_v2.0_scaffold208G41983 Striga asiatica HOM05D037989 ORTHO05D011213 2.5e-06 57.0 47 51.1
SGA_v2.0_scaffold46G17370 Striga asiatica HOM05D023911 ORTHO05D011213 3.3e-06 56.6 62 40.3
SGA_v2.0_scaffold20G08984 Striga asiatica HOM05D000631 ORTHO05D000524 7.4e-06 55.5 47 46.8


User provided reference genes

Program Settings