Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 4.9e-188 661.0 338 100.0
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 9.8e-112 407.5 326 68.7
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.6e-109 400.2 332 64.8
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.3e-107 392.5 326 62.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.3e-107 392.5 326 62.6
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 5.6e-107 391.7 332 63.6
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.2e-106 390.6 327 61.8
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 6.2e-106 388.3 329 61.4
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.3e-105 386.3 329 60.8
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 9.8e-104 380.9 330 61.5
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 9.8e-104 380.9 325 61.8
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.3e-103 380.6 330 61.2
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.9e-103 379.4 333 61.9
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 8.3e-103 377.9 333 60.4
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 8.3e-103 377.9 330 60.6
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.4e-102 377.1 330 60.6
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 2.4e-102 376.3 333 61.3
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.2e-102 375.9 327 59.9
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 4.1e-102 375.6 334 61.1
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.7e-101 372.9 332 58.7
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.5e-101 372.5 325 61.5
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.3e-100 369.8 330 60.0
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 3.9e-100 369.0 335 57.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 5.1e-100 368.6 325 58.2
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 6.6e-100 368.2 333 59.2
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 8.6e-100 367.9 325 61.5
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 8.6e-100 367.9 325 60.6
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.5e-99 367.1 329 59.9
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 9.5e-99 364.4 325 58.8
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 9.5e-99 364.4 322 60.9
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.2e-98 364.0 332 58.7
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 2.1e-98 363.2 333 58.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 2.8e-98 362.8 327 58.4
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.8e-98 362.8 325 58.2
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 4.7e-98 362.1 329 59.6
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.2e-98 361.7 332 58.7
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.8e-97 360.1 331 57.1
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.8e-97 360.1 333 57.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.8e-97 360.1 325 59.4
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 2.3e-97 359.8 332 58.7
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.3e-97 359.8 330 58.5
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.1e-97 359.4 332 58.7
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 5.2e-97 358.6 333 58.9
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 5.2e-97 358.6 326 58.0
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.9e-97 357.8 332 58.1
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 8.9e-97 357.8 325 58.2
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 8.9e-97 357.8 325 58.8
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-96 357.5 332 58.4
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.0e-96 356.7 332 58.4
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.4e-96 355.9 332 58.4
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 4.4e-96 355.5 329 58.1
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 9.9e-96 354.4 335 57.6
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.3e-95 354.0 310 61.0
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 2.9e-95 352.8 329 56.8
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 6.4e-95 351.7 333 55.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 6.4e-95 351.7 336 58.0
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.4e-95 351.3 325 56.3
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.4e-95 351.3 325 56.3
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.1e-94 350.9 296 61.5
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.4e-94 350.5 346 57.2
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 5.4e-94 348.6 329 56.2
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 7.1e-94 348.2 325 55.7
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.6e-93 347.1 335 57.0
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.3e-92 344.0 327 56.3
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.7e-92 343.6 325 57.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.7e-92 343.6 324 58.0
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.3e-92 343.2 327 57.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-92 342.8 324 57.1
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.0e-92 342.8 326 55.8
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 8.6e-92 341.3 325 57.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-91 340.9 324 57.4
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.3e-91 339.3 325 57.2
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 4.7e-90 335.5 325 55.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 6.2e-90 335.1 325 56.9
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 6.2e-90 335.1 325 56.0
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 3.1e-89 332.8 325 55.4
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 3.1e-89 332.8 336 56.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 4.0e-89 332.4 325 56.0
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 7.6e-88 328.2 274 65.7
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.9e-87 326.2 310 58.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.9e-87 326.2 274 62.8
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.1e-86 324.3 325 53.8
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.1e-86 324.3 310 58.1
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 4.6e-85 318.9 270 61.9
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 3.0e-84 316.2 326 54.6
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 5.6e-83 312.0 329 53.2
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.5e-80 303.9 333 50.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 5.8e-80 302.0 345 53.6
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.3e-79 300.8 338 52.4
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 4.2e-78 295.8 327 55.4
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 4.6e-77 292.4 339 51.3
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 6.0e-77 292.0 337 49.3
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.5e-75 287.3 246 60.6
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 3.1e-65 253.1 327 45.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 4.5e-64 249.2 291 51.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.9e-63 245.7 327 43.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 7.1e-62 241.9 209 61.7
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.3e-58 231.1 325 44.6
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.1e-53 213.8 229 54.1
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 2.7e-53 213.4 195 55.9
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.3e-52 211.1 194 59.3
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.0e-47 192.6 205 53.2
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 4.8e-42 176.0 166 57.8
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.7e-39 167.5 260 41.5
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.1e-29 134.0 112 61.6
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.0e-28 131.7 112 60.7
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.8e-23 113.2 90 66.7
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.9e-22 110.9 278 28.8
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 4.8e-18 96.3 129 42.6
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 2.3e-15 87.4 93 49.5
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.9e-14 84.3 274 31.4
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 9.5e-06 55.5 248 26.2


User provided reference genes

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