Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30991 Striga asiatica HOM05D000003 ORTHO05D000004 5.0e-151 537.7 270 100.0
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-13 80.9 88 44.3
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 2.4e-12 77.0 59 57.6
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 5.4e-12 75.9 210 27.1
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 7.1e-12 75.5 197 26.4
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-11 72.8 88 45.5
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 6.0e-11 72.4 122 36.1
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 1.1e-09 68.2 86 38.4
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-09 67.8 91 35.2
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.9e-09 67.4 210 26.2
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 7.3e-09 65.5 247 22.7
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 6.2e-08 62.4 92 37.0
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-07 61.2 86 36.0
TPR.G17522 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-07 61.2 88 33.0
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 4.0e-07 59.7 90 37.8
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-07 59.3 97 30.9
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 5.2e-07 59.3 86 43.0
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-07 58.9 249 21.7
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 6.8e-07 58.9 58 46.6
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 1.2e-06 58.2 91 37.4
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 1.5e-06 57.8 82 34.1
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 2.6e-06 57.0 91 36.3
CANSAT56G2394 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-06 55.8 96 34.4
CANSAT54G1058 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-06 55.1 96 34.4
CANSAT64G1779 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-06 55.1 96 33.3
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.9e-06 55.1 92 29.3
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 9.9e-06 55.1 142 30.3
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 9.9e-06 55.1 88 31.8


User provided reference genes

Program Settings