Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.8e-254 882.1 455 100.0
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.6e-192 675.6 469 76.1
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 2.8e-186 655.6 482 70.3
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 7.1e-182 641.0 468 72.4
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 9.3e-182 640.6 470 72.3
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.7e-181 639.0 461 72.0
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 4.6e-181 638.3 463 70.8
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 5.6e-179 631.3 465 71.6
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.3e-178 630.2 465 71.4
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.1e-178 629.4 465 69.0
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.8e-178 628.2 465 72.5
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.2e-176 623.6 465 70.8
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.0e-176 622.9 465 69.5
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 7.6e-176 620.9 465 70.8
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.3e-175 620.2 471 72.0
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 3.8e-175 618.6 463 68.0
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.1e-174 617.1 464 69.0
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.2e-174 615.5 464 68.8
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.1e-173 612.8 461 68.3
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.1e-173 612.8 465 67.7
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 3.5e-173 612.1 465 68.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 6.0e-173 611.3 465 66.5
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.3e-172 610.1 461 67.7
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 5.1e-172 608.2 468 69.0
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.1e-171 607.1 465 67.3
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.1e-171 607.1 465 69.5
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 1.1e-171 607.1 461 69.4
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 1.9e-171 606.3 465 69.2
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.5e-171 605.9 465 67.1
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 2.5e-171 605.9 465 68.6
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.3e-171 605.5 465 67.3
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.3e-171 605.1 469 70.1
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 5.6e-171 604.7 465 67.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.6e-170 603.2 469 70.1
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.7e-170 602.1 465 68.2
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 6.2e-170 601.3 469 69.9
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.1e-169 600.5 454 68.1
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.8e-169 599.7 466 68.2
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.8e-169 599.7 469 67.6
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.4e-169 599.4 465 69.7
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 9.0e-169 597.4 465 66.0
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.2e-168 597.0 466 70.2
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.5e-168 596.7 465 66.5
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.5e-168 596.7 488 65.2
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 2.0e-168 596.3 470 68.7
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.4e-168 595.5 461 65.3
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 7.6e-168 594.3 465 68.6
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.3e-167 593.6 462 65.4
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.7e-167 593.2 465 65.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.2e-167 592.8 462 66.9
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.2e-167 592.8 465 69.2
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 2.9e-167 592.4 465 65.8
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.9e-167 592.4 464 66.6
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 6.5e-167 591.3 462 66.7
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 6.5e-167 591.3 468 69.7
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 8.4e-167 590.9 465 68.2
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.1e-166 590.5 510 61.2
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 2.5e-166 589.3 463 66.1
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.2e-166 589.0 416 70.4
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 4.2e-166 588.6 465 68.2
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 9.3e-166 587.4 464 65.3
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 1.6e-165 586.6 422 71.1
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 2.1e-165 586.3 462 66.5
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.1e-165 586.3 455 66.6
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.7e-165 585.9 470 68.3
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.7e-165 585.9 466 69.7
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 3.5e-165 585.5 461 65.7
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.0e-165 584.7 465 64.9
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 6.0e-165 584.7 444 68.9
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.3e-164 583.6 466 68.7
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.3e-164 582.8 462 65.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.9e-164 582.0 463 65.9
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 5.1e-164 581.6 465 65.4
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 6.7e-164 581.3 469 65.2
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 8.7e-164 580.9 461 65.3
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 1.5e-163 580.1 465 67.5
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.5e-163 580.1 465 65.2
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.5e-163 580.1 462 65.6
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.3e-163 578.9 461 64.2
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 4.3e-163 578.6 421 68.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 2.2e-162 576.2 434 66.8
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 2.8e-162 575.9 466 67.8
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 2.8e-162 575.9 470 67.0
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.8e-162 575.1 493 63.7
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 6.3e-162 574.7 464 66.4
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 8.2e-162 574.3 462 64.9
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.4e-161 573.5 466 66.3
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.8e-161 573.2 462 65.4
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.8e-161 573.2 462 65.4
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.8e-161 573.2 462 65.4
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 3.1e-161 572.4 462 64.7
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 4.1e-161 572.0 466 67.4
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 6.9e-161 571.2 468 66.7
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.0e-159 567.4 462 64.9
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.3e-159 567.0 427 67.4
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 1.1e-158 563.9 463 64.8
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.4e-158 563.5 462 64.3
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.5e-158 562.8 463 64.6
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 4.2e-158 562.0 459 62.5
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 4.2e-158 562.0 426 66.7
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.1e-157 559.7 416 67.1
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 2.3e-156 556.2 401 68.6
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.8e-154 548.5 490 62.2
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 2.5e-150 536.2 465 62.6
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 3.2e-150 535.8 398 67.6
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 4.2e-150 535.4 455 62.0
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 3.3e-147 525.8 452 61.5
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.1e-145 520.8 426 61.5
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 3.6e-141 505.8 415 63.9
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.9e-140 502.3 392 64.3
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.6e-125 452.6 383 66.6
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 3.6e-125 452.6 407 55.5
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 6.1e-125 451.8 399 56.4
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 8.8e-124 448.0 318 70.1
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.3e-114 417.5 402 51.5
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.0e-108 396.0 459 49.0
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.9e-94 350.5 418 48.3
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 6.8e-92 342.0 542 37.5
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 8.3e-90 335.1 285 57.9
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.2e-85 321.2 262 69.5
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.6e-67 260.4 188 67.6
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 5.6e-62 242.7 269 56.1
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 3.3e-54 216.9 255 56.9
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 3.3e-54 216.9 255 56.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 3.0e-47 193.7 205 51.7
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.7e-42 177.9 158 61.4
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 9.7e-38 162.2 123 73.2
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.4e-36 158.3 154 51.9
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.7e-32 144.1 145 52.4
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.8e-31 139.0 384 28.9
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 3.5e-27 127.1 118 55.9
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 4.2e-17 93.6 57 82.5
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 7.2e-17 92.8 59 74.6
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 1.3e-13 82.0 59 61.0
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.4e-12 78.6 66 59.1
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.6e-11 75.1 66 66.7


User provided reference genes

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