Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40538 Sequoiadendron giganteum HOM05D003810 ORTHO05D004416 1.9e-30 135.2 67 100.0
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 1.6e-10 68.9 48 70.8
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 3.7e-10 67.8 59 59.3
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 4.8e-10 67.4 53 62.3
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.1e-09 66.2 56 58.9
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 1.4e-09 65.9 53 58.5
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 5.3e-09 63.9 52 63.5
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 9.0e-09 63.2 51 62.7
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.2e-08 62.8 51 60.8
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.2e-08 62.8 52 59.6
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 2.0e-08 62.0 47 63.8
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 2.0e-08 62.0 47 63.8
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.0e-08 62.0 48 62.5
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 2.6e-08 61.6 48 64.6
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 3.4e-08 61.2 60 53.3
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 4.5e-08 60.8 51 60.8
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 4.5e-08 60.8 56 58.9
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.5e-08 60.8 59 55.9
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 5.8e-08 60.5 56 58.9
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 5.8e-08 60.5 56 58.9
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 5.8e-08 60.5 48 62.5
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 5.8e-08 60.5 48 62.5
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.0e-07 59.7 53 56.6
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.0e-07 59.7 56 57.1
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 1.0e-07 59.7 51 58.8
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 1.0e-07 59.7 55 56.4
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.3e-07 59.3 52 59.6
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 2.2e-07 58.5 53 54.7
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 2.2e-07 58.5 51 58.8
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 2.9e-07 58.2 56 53.6
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 3.8e-07 57.8 51 56.9
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 3.8e-07 57.8 47 61.7
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 3.8e-07 57.8 47 61.7
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 4.9e-07 57.4 56 53.6
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 4.9e-07 57.4 51 56.9
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 4.9e-07 57.4 48 60.4
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 6.5e-07 57.0 51 54.9
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 6.5e-07 57.0 56 53.6
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 6.5e-07 57.0 51 54.9
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 8.4e-07 56.6 56 51.8
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 8.4e-07 56.6 48 60.4
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 8.4e-07 56.6 47 59.6
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 8.4e-07 56.6 47 61.7
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 1.1e-06 56.2 48 58.3
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.1e-06 56.2 48 58.3
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.1e-06 56.2 60 50.0
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.1e-06 56.2 48 60.4
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.4e-06 55.8 59 45.8
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.4e-06 55.8 51 54.9
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 1.4e-06 55.8 48 54.2
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.4e-06 55.8 48 54.2
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 1.4e-06 55.8 48 54.2
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.4e-06 55.8 53 50.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 1.4e-06 55.8 47 59.6
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.9e-06 55.5 52 50.0
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 1.9e-06 55.5 47 57.4
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 1.9e-06 55.5 47 59.6
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.9e-06 55.5 53 56.6
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 2.5e-06 55.1 51 54.9
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 2.5e-06 55.1 47 57.4
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 2.5e-06 55.1 50 56.0
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 2.5e-06 55.1 48 52.1
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 3.2e-06 54.7 56 50.0
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 3.2e-06 54.7 56 50.0
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 3.2e-06 54.7 56 50.0
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 4.2e-06 54.3 50 54.0
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 4.2e-06 54.3 60 48.3
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 4.2e-06 54.3 51 51.0
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 4.2e-06 54.3 50 54.0
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 7.1e-06 53.5 53 52.8
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 9.3e-06 53.1 51 51.0
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 9.3e-06 53.1 48 58.3
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 9.3e-06 53.1 48 58.3


User provided reference genes

Program Settings