Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40039 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 7.1e-121 437.2 207 100.0
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 2.0e-46 189.9 114 80.7
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.5e-38 163.7 114 71.9
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 3.7e-37 159.1 145 58.6
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 2.4e-36 156.4 114 64.9
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 3.2e-36 156.0 148 51.4
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 5.4e-36 155.2 147 51.0
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 5.4e-36 155.2 147 51.0
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 7.0e-36 154.8 114 64.0
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 9.2e-36 154.5 116 63.8
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 1.2e-35 154.1 112 72.3
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 1.6e-35 153.7 147 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 2.0e-35 153.3 114 64.9
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 2.7e-35 152.9 114 64.9
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 2.7e-35 152.9 114 64.9
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 4.6e-35 152.1 112 67.0
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 4.6e-35 152.1 114 63.2
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.6e-35 152.1 148 49.3
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 4.6e-35 152.1 115 60.9
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 6.0e-35 151.8 114 62.3
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 6.0e-35 151.8 125 62.4
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 7.8e-35 151.4 114 62.3
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 7.8e-35 151.4 114 63.2
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 7.8e-35 151.4 114 64.9
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 1.0e-34 151.0 114 63.2
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 1.0e-34 151.0 114 62.3
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 1.3e-34 150.6 114 62.3
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 1.3e-34 150.6 114 62.3
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 1.7e-34 150.2 115 65.2
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 1.7e-34 150.2 112 63.4
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 1.7e-34 150.2 114 63.2
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 2.3e-34 149.8 116 61.2
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 2.3e-34 149.8 116 61.2
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 3.0e-34 149.4 114 62.3
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 3.0e-34 149.4 114 60.5
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 3.9e-34 149.1 125 60.8
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 3.9e-34 149.1 112 63.4
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 5.0e-34 148.7 112 64.3
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 5.0e-34 148.7 114 62.3
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 5.0e-34 148.7 145 53.1
FAN26G1737 Fragaria x ananassa HOM05D003257 ORTHO05D003749 5.0e-34 148.7 145 53.1
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 5.0e-34 148.7 145 53.1
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 5.0e-34 148.7 114 60.5
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 5.0e-34 148.7 114 62.3
Hund22692 Selenicereus undatus HOM05D003257 ORTHO05D003749 5.0e-34 148.7 115 63.5
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 5.0e-34 148.7 114 64.0
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 6.6e-34 148.3 112 61.6
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 59.6
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 64.0
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 62.3
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 60.5
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 63.2
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 63.2
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 8.6e-34 147.9 114 60.5
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 1.1e-33 147.5 112 61.6
ClCG06G008390 Citrullus lanatus HOM05D003257 ORTHO05D003749 1.1e-33 147.5 114 62.3
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 1.1e-33 147.5 114 60.5
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 1.1e-33 147.5 112 61.6
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 1.5e-33 147.1 112 62.5
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 1.5e-33 147.1 112 60.7
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.5e-33 147.1 114 61.4
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.5e-33 147.1 114 61.4
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 1.5e-33 147.1 114 63.2
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 1.9e-33 146.7 112 61.6
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.9e-33 146.7 143 53.1
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.9e-33 146.7 114 59.6
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 1.9e-33 146.7 114 62.3
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 1.9e-33 146.7 114 60.5
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 2.5e-33 146.4 114 60.5
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 2.5e-33 146.4 114 60.5
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 2.5e-33 146.4 114 60.5
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 3.3e-33 146.0 112 62.5
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 3.3e-33 146.0 112 62.5
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 3.3e-33 146.0 112 61.6
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 3.3e-33 146.0 114 62.3
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 3.3e-33 146.0 114 60.5
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 3.3e-33 146.0 145 52.4
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 3.3e-33 146.0 114 59.6
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 3.3e-33 146.0 116 59.5
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 3.3e-33 146.0 116 59.5
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 3.3e-33 146.0 114 60.5
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 3.3e-33 146.0 145 52.4
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 3.3e-33 146.0 112 59.8
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 4.3e-33 145.6 112 61.6
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 4.3e-33 145.6 112 61.6
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 5.6e-33 145.2 112 61.6
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 5.6e-33 145.2 112 61.6
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 5.6e-33 145.2 116 58.6
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 5.6e-33 145.2 112 64.3
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 5.6e-33 145.2 112 63.4
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 7.3e-33 144.8 114 60.5
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 7.3e-33 144.8 112 63.4
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 7.3e-33 144.8 114 60.5
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 7.3e-33 144.8 114 59.6
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 7.3e-33 144.8 118 60.2
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 9.5e-33 144.4 112 59.8
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 9.5e-33 144.4 112 59.8
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 9.5e-33 144.4 114 59.6
VMungo0464G1907 Vigna mungo HOM05D003257 ORTHO05D003749 9.5e-33 144.4 160 49.4
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 1.2e-32 144.1 112 60.7
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 1.2e-32 144.1 112 60.7
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 1.6e-32 143.7 112 60.7
BcaC02g12332 Brassica carinata HOM05D003257 ORTHO05D003749 1.6e-32 143.7 112 60.7
MELO3C027379.2 Cucumis melo HOM05D003257 ORTHO05D003749 1.6e-32 143.7 114 59.6
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 1.6e-32 143.7 112 61.6
Psat6g114760 Pisum sativum HOM05D003257 ORTHO05D003749 1.6e-32 143.7 112 60.7
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 2.1e-32 143.3 115 59.1
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 2.1e-32 143.3 112 60.7
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 2.1e-32 143.3 112 58.9
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 2.8e-32 142.9 114 61.4
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 2.8e-32 142.9 112 59.8
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 2.8e-32 142.9 112 59.8
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 2.8e-32 142.9 114 60.5
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 2.8e-32 142.9 115 60.0
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 3.6e-32 142.5 116 57.8
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 3.6e-32 142.5 112 58.9
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 3.6e-32 142.5 114 58.8
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 3.6e-32 142.5 112 61.6
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 4.7e-32 142.1 112 61.6
SalBow3G4227 Salvia bowleyana HOM05D003257 ORTHO05D003749 4.7e-32 142.1 112 59.8
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 6.2e-32 141.7 114 59.6
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 6.2e-32 141.7 112 58.9
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 6.2e-32 141.7 112 60.7
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 8.0e-32 141.4 113 60.2
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 8.0e-32 141.4 113 60.2
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 8.0e-32 141.4 112 60.7
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 8.0e-32 141.4 114 59.6
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 8.0e-32 141.4 112 61.6
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 1.1e-31 141.0 112 59.8
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 1.1e-31 141.0 112 59.8
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 1.1e-31 141.0 112 59.8
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 1.1e-31 141.0 112 59.8
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 1.1e-31 141.0 114 62.3
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 1.4e-31 140.6 115 59.1
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 1.4e-31 140.6 114 58.8
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 1.4e-31 140.6 114 57.9
Zm00001eb440710 Zea mays HOM05D003257 ORTHO05D003749 1.4e-31 140.6 114 57.9
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 1.8e-31 140.2 112 59.8
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 1.8e-31 140.2 114 57.0
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 2.3e-31 139.8 111 58.6
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 3.1e-31 139.4 112 58.9
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 4.0e-31 139.0 112 59.8
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 4.0e-31 139.0 114 61.4
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 4.0e-31 139.0 112 58.9
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 4.0e-31 139.0 114 57.0
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 6.8e-31 138.3 114 56.1
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 1.2e-30 137.5 112 58.0
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 1.2e-30 137.5 114 57.9
Actinidia02460 Actinidia chinensis HOM05D003257 ORTHO05D003749 2.0e-30 136.7 114 59.6
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 2.0e-30 136.7 113 61.1
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 2.6e-30 136.3 112 59.8
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 1.3e-29 134.0 115 56.5
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 1.7e-29 133.7 113 58.4
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 2.9e-29 132.9 113 58.4
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 4.9e-29 132.1 113 57.5
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 4.9e-29 132.1 113 57.5
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 6.4e-29 131.7 116 58.6
Hund12292 Selenicereus undatus HOM05D003257 ORTHO05D003749 3.2e-28 129.4 104 56.7
AL4G43080 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 4.1e-28 129.0 107 57.9
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 7.0e-28 128.3 122 54.1
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 8.6e-26 121.3 96 59.4
AL6G43600 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 6.2e-24 115.2 92 60.9
AL5G24360 Arabidopsis lyrata HOM05D003257 ORTHO05D001652 1.1e-23 114.4 92 60.9
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 1.4e-23 114.0 83 67.5
SEGI_02109 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 4.0e-23 112.5 71 77.5
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 1.7e-21 107.1 96 55.2
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 8.3e-21 104.8 110 48.2
BcaB01g06154 Brassica carinata HOM05D003257 ORTHO05D003749 1.2e-19 100.9 107 48.6
Cfa021656 Carpinus fangiana HOM05D003257 ORTHO05D003749 2.3e-18 96.7 111 43.2
THA.LOC104823108 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 1.1e-17 94.4 69 59.4
FvH4_7g02331 Fragaria vesca HOM05D003257 ORTHO05D003749 4.3e-17 92.4 127 41.7
RcHm_v2.0_Chr1g0319671 Rosa chinensis HOM05D003257 ORTHO05D003749 3.6e-16 89.4 91 49.5
PRCOL_00004214 Prasinoderma coloniale HOM05D003257 ORTHO05D003749 4.7e-16 89.0 114 40.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 8.1e-16 88.2 72 59.7
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 6.8e-15 85.1 115 44.3
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 1.6e-11 73.9 77 51.9
Lj2A826G20 Lonicera japonica HOM05D003257 ORTHO05D003749 3.3e-09 66.2 60 56.7
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 2.4e-07 60.1 47 68.1
GSVIVG01038275001 Vitis vinifera HOM05D003257 ORTHO05D003749 2.4e-07 60.1 51 54.9


User provided reference genes

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