Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 5.8e-135 484.2 239 100.0
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 2.9e-25 119.8 112 51.8
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.3e-22 110.9 103 49.5
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 1.1e-21 107.8 112 47.3
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 1.9e-21 107.1 114 46.5
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 3.3e-21 106.3 112 49.1
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 4.3e-21 105.9 103 49.5
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 5.6e-21 105.5 99 48.5
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 1.3e-20 104.4 103 50.5
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 4.8e-20 102.4 115 42.6
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 6.2e-20 102.1 116 46.6
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 1.1e-19 101.3 118 45.8
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 1.4e-19 100.9 161 40.4
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 2.4e-19 100.1 103 46.6
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 3.1e-19 99.8 112 42.9
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 6.9e-19 98.6 112 42.9
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 6.9e-19 98.6 145 37.9
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.0e-18 97.1 112 42.0
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 2.0e-18 97.1 201 31.3
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 2.6e-18 96.7 112 42.9
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 2.6e-18 96.7 112 42.9
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 4.5e-18 95.9 99 46.5
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 4.5e-18 95.9 115 44.3
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 4.5e-18 95.9 115 40.0
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 5.8e-18 95.5 116 44.0
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 5.8e-18 95.5 103 46.6
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 7.6e-18 95.1 92 54.3
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 7.6e-18 95.1 103 46.6
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 7.6e-18 95.1 103 46.6
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 7.6e-18 95.1 102 43.1
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 1.0e-17 94.7 112 42.9
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 1.3e-17 94.4 103 48.5
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 1.3e-17 94.4 105 45.7
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.3e-17 94.4 103 44.7
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 1.3e-17 94.4 103 45.6
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.3e-17 94.4 103 44.7
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 1.3e-17 94.4 145 36.6
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 1.3e-17 94.4 145 36.6
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.3e-17 94.4 112 42.0
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 2.2e-17 93.6 103 46.6
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 2.9e-17 93.2 103 44.7
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 3.8e-17 92.8 103 41.7
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 4.9e-17 92.4 138 37.7
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 4.9e-17 92.4 103 44.7
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 6.5e-17 92.0 105 46.7
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 8.4e-17 91.7 103 46.6
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 8.4e-17 91.7 103 43.7
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 1.4e-16 90.9 103 47.6
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.9e-16 90.5 141 34.8
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 2.5e-16 90.1 151 35.8
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 2.5e-16 90.1 112 41.1
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.2e-16 89.7 145 37.2
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 3.2e-16 89.7 113 41.6
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 4.2e-16 89.4 103 46.6
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.2e-16 89.4 145 36.6
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.2e-16 89.4 124 39.5
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 7.1e-16 88.6 103 42.7
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 9.3e-16 88.2 101 46.5
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 9.3e-16 88.2 115 40.0
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 1.2e-15 87.8 124 38.7
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.2e-15 87.8 112 40.2
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.2e-15 87.8 98 42.9
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 1.2e-15 87.8 104 40.4
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 2.1e-15 87.0 92 45.7
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 4.6e-15 85.9 127 42.5
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 6.0e-15 85.5 115 40.9
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 7.9e-15 85.1 112 37.5
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 7.9e-15 85.1 103 43.7
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 1.0e-14 84.7 113 39.8
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.3e-14 84.3 101 43.6
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 1.3e-14 84.3 115 40.0
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 1.8e-14 84.0 142 34.5
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 2.3e-14 83.6 103 44.7
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 3.0e-14 83.2 103 40.8
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 6.7e-14 82.0 102 43.1
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 8.7e-14 81.6 97 43.3
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 8.7e-14 81.6 122 38.5
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 8.7e-14 81.6 103 41.7
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.1e-13 81.3 115 36.5
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 1.1e-13 81.3 104 40.4
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 2.5e-13 80.1 115 35.7
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 2.5e-13 80.1 150 32.7
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 4.3e-13 79.3 115 35.7
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 4.3e-13 79.3 115 33.9
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 4.3e-13 79.3 115 33.9
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.3e-13 79.3 148 33.8
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.3e-13 79.3 148 33.8
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 5.7e-13 79.0 139 36.0
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 7.4e-13 78.6 113 35.4
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.4e-13 78.6 148 33.8
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 9.7e-13 78.2 115 33.9
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.3e-12 77.8 115 37.4
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 1.6e-12 77.4 115 34.8
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 1.6e-12 77.4 115 34.8
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 1.6e-12 77.4 135 34.8
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.6e-12 77.4 115 37.4
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.2e-12 77.0 148 34.5
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 2.8e-12 76.6 115 34.8
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 2.8e-12 76.6 115 34.8
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 2.8e-12 76.6 115 34.8
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 8.2e-12 75.1 96 36.5
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.1e-11 74.7 95 38.9
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 1.1e-11 74.7 103 37.9
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.4e-11 74.3 124 33.9
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.8e-11 73.9 112 33.9
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 1.8e-11 73.9 127 33.9
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 2.4e-11 73.6 139 31.7
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 3.1e-11 73.2 102 38.2
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 4.1e-11 72.8 115 33.9
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 4.1e-11 72.8 120 33.3
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 9.0e-11 71.6 120 34.2
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.5e-10 70.9 119 33.6
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.6e-10 70.1 124 32.3
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.6e-10 70.1 97 41.2
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.4e-10 69.7 105 34.3
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 5.9e-10 68.9 79 44.3
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.2e-09 67.0 93 41.9
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.2e-08 62.0 99 33.3
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 3.6e-07 59.7 180 27.2
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.0e-06 58.2 110 32.7
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.3e-06 57.0 106 29.2


User provided reference genes

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