Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39586 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.6e-202 709.1 345 100.0
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 8.8e-100 367.9 257 72.8
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 8.8e-100 367.9 257 72.8
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 2.0e-99 366.7 257 72.0
SEGI_20307 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 2.0e-99 366.7 257 72.8
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 9.7e-99 364.4 257 71.6
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 9.7e-99 364.4 257 71.6
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 9.7e-99 364.4 257 71.6
Sopen01g028720 Solanum pennellii HOM05D002864 ORTHO05D007972 9.7e-99 364.4 257 71.6
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 1.7e-98 363.6 257 71.6
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 2.2e-98 363.2 257 71.6
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 3.7e-98 362.5 257 71.2
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 3.7e-98 362.5 257 71.2
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 3.7e-98 362.5 257 71.2
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 3.7e-98 362.5 257 71.2
Sp3g25700 Schrenkiella parvula HOM05D002864 ORTHO05D007972 3.7e-98 362.5 257 71.2
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 4.8e-98 362.1 257 71.2
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.2e-98 361.3 257 71.2
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 2.4e-97 359.8 268 69.4
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 3.1e-97 359.4 245 73.9
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 9.1e-97 357.8 245 73.5
arahy.Tifrunner.gnm1.ann1.BSNJ2C Arachis hypogaea HOM05D002864 ORTHO05D007972 1.2e-96 357.5 245 73.9
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 2.7e-96 356.3 245 73.5
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 3.5e-96 355.9 266 69.2
arahy.Tifrunner.gnm1.ann1.76QWAA Arachis hypogaea HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
arahy.Tifrunner.gnm1.ann1.L9JJXJ Arachis hypogaea HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
arahy.Tifrunner.gnm1.ann1.N2KMKI Arachis hypogaea HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 4.5e-96 355.5 257 70.0
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 4.5e-96 355.5 257 70.4
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 4.5e-96 355.5 245 73.5
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 5.9e-96 355.1 245 72.7
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 7.7e-96 354.8 245 73.5
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 7.7e-96 354.8 245 73.5
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 7.7e-96 354.8 245 73.5
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 4.2e-94 349.0 245 73.1
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 7.2e-94 348.2 245 72.2
Lsat_1_v5_gn_0_44400 Lactuca sativa HOM05D002864 ORTHO05D007972 7.2e-94 348.2 257 69.6
Lj2C1221T24 Lonicera japonica HOM05D002864 ORTHO05D007972 1.2e-93 347.4 245 72.7
HanXRQChr00c0055g0571421 Helianthus annuus HOM05D002864 ORTHO05D007972 1.6e-93 347.1 246 72.4
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 1.6e-93 347.1 246 72.4
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 5.4e-89 332.0 250 68.0
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 5.4e-89 332.0 250 68.0
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 2.9e-87 326.2 245 69.8
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 3.6e-85 319.3 258 64.3
SEGI_33420 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.0e-84 317.8 164 91.5
Nitab4.5_0000120g0110 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.3e-82 310.8 257 63.4
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 6.3e-82 308.5 212 74.5
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 7.0e-81 305.1 207 74.9
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 1.6e-77 293.9 238 64.7
HanXRQChr17g0558551 Helianthus annuus HOM05D002864 ORTHO05D007972 2.1e-77 293.5 223 68.6
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 1.1e-73 281.2 184 77.7
SEGI_14242 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 4.1e-73 279.3 150 88.7
Nitab4.5_0024895g0020 Nicotiana tabacum HOM05D002864 ORTHO05D007972 9.2e-73 278.1 257 59.9
Glyma.05G092000 Glycine max HOM05D002864 ORTHO05D007972 1.5e-70 270.8 184 74.5
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 1.8e-68 263.8 169 78.1
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 9.8e-67 258.1 163 79.1
CAN.G124.9 Capsicum annuum HOM05D002864 ORTHO05D007972 2.9e-66 256.5 190 71.6
Gohir.A01G126732 Gossypium hirsutum HOM05D002864 ORTHO05D007972 1.1e-60 238.0 158 75.3
BcaB04g20322 Brassica carinata HOM05D002864 ORTHO05D007972 1.2e-59 234.6 160 75.0
Zm00001eb434710 Zea mays HOM05D002864 ORTHO05D007972 4.6e-56 222.6 153 71.9
CAN.G1.12 Capsicum annuum HOM05D002864 ORTHO05D007972 1.0e-55 221.5 147 76.2
CAN.G502.16 Capsicum annuum HOM05D002864 ORTHO05D007972 3.4e-51 206.5 154 67.5
Glyma.07G122200 Glycine max HOM05D002864 ORTHO05D007972 8.4e-50 201.8 153 67.3
CAN.G1082.1 Capsicum annuum HOM05D002864 ORTHO05D007972 3.5e-48 196.4 154 64.3
SHI26668 Sapria himalayana HOM05D002864 ORTHO05D007972 2.5e-46 190.3 176 60.2
Haze_27081 Corylus avellana HOM05D002864 ORTHO05D007972 1.8e-44 184.1 256 41.8
CAN.G1077.1 Capsicum annuum HOM05D002864 ORTHO05D007972 5.2e-44 182.6 145 62.8
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 1.2e-43 181.4 121 77.7
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 7.3e-38 162.2 103 76.7
SMO053G0012 Selaginella moellendorffii HOM05D002864 ORTHO05D007972 4.8e-37 159.5 146 58.2
BraSC177t45745Z Brassica rapa HOM05D002864 ORTHO05D007972 3.8e-34 149.8 114 65.8
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 9.3e-33 145.2 151 56.3
Lalb_Chr10g0094511 Lupinus albus HOM05D002864 ORTHO05D007972 3.1e-28 130.2 106 63.2
SHI33967 Sapria himalayana HOM05D002864 ORTHO05D007972 4.0e-28 129.8 146 50.0
CAN.G1542.5 Capsicum annuum HOM05D002864 ORTHO05D007972 7.6e-27 125.6 84 72.6
HanXRQChr16g0504981 Helianthus annuus HOM05D002864 ORTHO05D007972 2.2e-26 124.0 105 61.0
Phvul.003G168500 Phaseolus vulgaris HOM05D002864 ORTHO05D007972 8.4e-26 122.1 72 80.6
ATR0759G021 Amborella trichopoda HOM05D002864 ORTHO05D007972 4.2e-25 119.8 78 71.8
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.5e-22 111.3 79 73.4
Hma1.2p1_0484F.1_g162980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 2.1e-21 107.5 86 64.0
SEGI_21803 Sequoiadendron giganteum HOM05D010022 ORTHO05D006570 2.2e-18 97.4 95 47.4
CAN.G1001.39 Capsicum annuum HOM05D002864 ORTHO05D007972 6.5e-18 95.9 76 61.8
Haze_27639 Corylus avellana HOM05D002864 ORTHO05D007972 1.9e-17 94.4 103 47.6
CAN.G358.146 Capsicum annuum HOM05D002864 ORTHO05D007972 2.7e-16 90.5 64 64.1
SEGI_00062 Sequoiadendron giganteum HOM05D001366 ORTHO05D016210 3.9e-15 86.7 83 48.2
CARHR177290 Cardamine hirsuta HOM05D002864 ORTHO05D007972 8.7e-15 85.5 52 76.9
Solyc00g047200.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.5e-14 84.7 70 55.7
MELO3C029979.2 Cucumis melo HOM05D002864 ORTHO05D007972 5.7e-14 82.8 46 87.0
Cfa021369 Carpinus fangiana HOM05D002864 ORTHO05D007972 2.8e-13 80.5 48 81.2
GSVIVG01018703001 Vitis vinifera HOM05D002864 ORTHO05D007972 3.7e-13 80.1 54 75.9
CAN.G1194.10 Capsicum annuum HOM05D002864 ORTHO05D007972 6.3e-13 79.3 54 74.1
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.1e-12 76.6 191 29.3
SEGI_29417 Sequoiadendron giganteum HOM05D010022 ORTHO05D037593 9.0e-12 75.5 93 41.9
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 2.2e-10 70.9 58 65.5
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.9e-09 67.8 234 24.4
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 2.5e-09 67.4 181 26.5
SEGI_31854 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 2.5e-09 67.4 66 43.9
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 3.2e-09 67.0 206 26.7
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 3.2e-09 67.0 206 26.7
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 3.2e-09 67.0 206 26.7
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 3.2e-09 67.0 206 26.7
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.5e-09 66.2 181 26.5
Ca_08974_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 7.2e-09 65.9 49 65.3
SEGI_40151 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 7.2e-09 65.9 43 74.4
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.2e-08 65.1 215 25.1
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 3.6e-08 63.5 181 26.0
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.6e-08 63.5 181 26.0
Lalb_Chr11g0070191 Lupinus albus HOM05D002864 ORTHO05D007972 4.6e-08 63.2 49 59.2
Oeu043609.1 Olea europaea HOM05D002864 ORTHO05D007972 6.1e-08 62.8 53 62.3
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 3.0e-07 60.5 90 41.1
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 3.9e-07 60.1 231 23.4
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.1e-07 59.7 181 26.0
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.1e-07 59.7 181 26.0
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 6.7e-07 59.3 49 53.1
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 1.5e-06 58.2 236 22.9
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 3.3e-06 57.0 181 25.4
Hund28112 Selenicereus undatus HOM05D002864 ORTHO05D007972 3.3e-06 57.0 45 57.8
Aqoxy12s036 Aquilegia oxysepala HOM05D002864 ORTHO05D007972 4.3e-06 56.6 37 67.6
CAN.G380.5 Capsicum annuum HOM05D002864 ORTHO05D007972 9.7e-06 55.5 41 65.9
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 9.7e-06 55.5 197 24.9


User provided reference genes

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