Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39162 Sequoiadendron giganteum HOM05D005961 ORTHO05D007391 7.2e-86 320.5 155 100.0
MELO3C014129.2 Cucumis melo HOM05D005961 ORTHO05D007391 2.7e-56 222.2 111 91.0
CsaV3_3G004360 Cucumis sativus L. HOM05D005961 ORTHO05D007391 2.7e-56 222.2 111 91.0
MBI15_g06334_MAGBIO Magnolia biondii HOM05D005961 ORTHO05D007391 3.0e-55 218.8 109 91.7
GSVIVG01014763001 Vitis vinifera HOM05D005961 ORTHO05D007391 3.0e-55 218.8 109 91.7
Sed0014475 Sechium edule HOM05D005961 ORTHO05D007391 5.1e-55 218.0 109 89.9
Migut.H01720 Erythranthe guttata HOM05D005961 ORTHO05D007391 8.6e-55 217.2 109 90.8
Eucgr.F01999 Eucalyptus grandis HOM05D005961 ORTHO05D007391 8.6e-55 217.2 109 90.8
Nn1g08308 Nelumbo nucifera HOM05D005961 ORTHO05D007391 1.1e-54 216.9 111 91.0
SGA_v2.0_scaffold92G28182 Striga asiatica HOM05D005961 ORTHO05D007391 1.5e-54 216.5 109 90.8
ATR0751G034 Amborella trichopoda HOM05D005961 ORTHO05D007391 1.9e-54 216.1 109 90.8
CDE03G0125 Ceratophyllum demersum HOM05D005961 ORTHO05D007391 1.9e-54 216.1 109 90.8
CANSAT11G0752 Cannabis sativa HOM05D005961 ORTHO05D007391 2.5e-54 215.7 109 89.9
TAR629G2290 Trochodendron aralioides HOM05D005961 ORTHO05D007391 2.5e-54 215.7 109 89.9
Haze_09907 Corylus avellana HOM05D005961 ORTHO05D007391 3.3e-54 215.3 109 90.8
Cc05_g15600 Coffea canephora HOM05D005961 ORTHO05D007391 4.3e-54 214.9 109 89.0
Solyc07g066060.3 Solanum lycopersicum HOM05D005961 ORTHO05D007391 4.3e-54 214.9 130 77.7
HanXRQChr08g0232911 Helianthus annuus HOM05D005961 ORTHO05D007391 5.6e-54 214.5 109 89.9
Pp3c15_8550 Physcomitrium patens HOM05D005961 ORTHO05D007391 5.6e-54 214.5 111 91.0
QL08p000733 Quercus lobata HOM05D005961 ORTHO05D007391 5.6e-54 214.5 110 89.1
Lsat_1_v5_gn_0_16600 Lactuca sativa HOM05D005961 ORTHO05D007391 7.3e-54 214.2 109 89.0
Sopen07g034240 Solanum pennellii HOM05D005961 ORTHO05D007391 7.3e-54 214.2 130 77.7
Aqoxy6G00081 Aquilegia oxysepala HOM05D005961 ORTHO05D007391 9.5e-54 213.8 109 90.8
ECA246G2546 Erigeron canadensis HOM05D005961 ORTHO05D007391 9.5e-54 213.8 109 89.0
PSO541G1089 Papaver somniferum HOM05D005961 ORTHO05D007391 9.5e-54 213.8 109 89.0
PSO675G5428 Papaver somniferum HOM05D005961 ORTHO05D007391 9.5e-54 213.8 109 89.0
PGR083G0512 Punica granatum HOM05D005961 ORTHO05D007391 1.2e-53 213.4 109 90.8
unitig_0.g980 Utricularia gibba HOM05D005961 ORTHO05D007391 1.2e-53 213.4 109 88.1
Lj6g0009597 Lotus japonicus HOM05D005961 ORTHO05D007391 1.6e-53 213.0 109 89.0
COL.COLO4_18482 Corchorus olitorius HOM05D005961 ORTHO05D007391 2.1e-53 212.6 109 89.0
Dinv40902 Davidia involucrata HOM05D005961 ORTHO05D007391 2.1e-53 212.6 109 89.9
Rhsim04G0008500 Rhododendron simsii HOM05D005961 ORTHO05D007391 2.1e-53 212.6 109 88.1
Peaxi162Scf00232g00531 Petunia axillaris HOM05D005961 ORTHO05D007391 2.8e-53 212.2 109 89.0
PGSC0003DMG400022149 Solanum tuberosum HOM05D005961 ORTHO05D007391 3.6e-53 211.8 130 77.7
vmacro09602 Vaccinium macrocarpon HOM05D005961 ORTHO05D007391 3.6e-53 211.8 109 87.2
Gohir.A04G001700 Gossypium hirsutum HOM05D005961 ORTHO05D007391 4.7e-53 211.5 109 89.0
Gorai.009G454300 Gossypium raimondii HOM05D005961 ORTHO05D007391 4.7e-53 211.5 109 89.0
Lalb_Chr20g0115241 Lupinus albus HOM05D005961 ORTHO05D007391 6.2e-53 211.1 109 88.1
Mapoly0049s0058 Marchantia polymorpha HOM05D005961 ORTHO05D007391 6.2e-53 211.1 109 89.0
Potri.001G470900 Populus trichocarpa HOM05D005961 ORTHO05D007391 6.2e-53 211.1 109 88.1
CiPaw.11G209700 Carya illinoinensis HOM05D005961 ORTHO05D007391 1.1e-52 210.3 109 88.1
Duzib170G0004 Durio zibethinus HOM05D005961 ORTHO05D007391 1.1e-52 210.3 109 88.1
Thecc.07G002900 Theobroma cacao HOM05D005961 ORTHO05D007391 1.1e-52 210.3 109 89.0
MSTRG.14516 Avicennia marina HOM05D005961 ORTHO05D007391 1.4e-52 209.9 109 88.1
AUR62031244 Chenopodium quinoa HOM05D005961 ORTHO05D007391 1.4e-52 209.9 109 86.2
Gohir.D05G387700 Gossypium hirsutum HOM05D005961 ORTHO05D007391 1.4e-52 209.9 109 88.1
TWI39G0064 Tripterygium wilfordii HOM05D005961 ORTHO05D007391 1.4e-52 209.9 109 88.1
HPP92_026162 Vanilla planifolia HOM05D005961 ORTHO05D007391 1.4e-52 209.9 109 87.2
EL10Ac7g16751 Beta vulgaris HOM05D005961 ORTHO05D007391 1.8e-52 209.5 109 86.2
Sabra16G0319500 Salix brachista HOM05D005961 ORTHO05D007391 1.8e-52 209.5 109 87.2
Manes.04G054100 Manihot esculenta HOM05D005961 ORTHO05D007391 2.4e-52 209.1 109 87.2
Ciclev10008971m.g Citrus clementina HOM05D005961 ORTHO05D007391 3.1e-52 208.8 109 87.2
DCAR_013764 Daucus carota HOM05D005961 ORTHO05D007391 3.1e-52 208.8 108 88.0
Nitab4.5_0001303g0010 Nicotiana tabacum HOM05D005961 ORTHO05D007391 3.1e-52 208.8 109 88.1
Actinidia30358 Actinidia chinensis HOM05D005961 ORTHO05D007391 4.0e-52 208.4 109 87.2
arahy.Tifrunner.gnm1.ann1.6L2P9T Arachis hypogaea HOM05D005961 ORTHO05D007391 4.0e-52 208.4 109 87.2
CARHR269490 Cardamine hirsuta HOM05D005961 ORTHO05D007391 4.0e-52 208.4 110 87.3
AL8G31760 Arabidopsis lyrata HOM05D005961 ORTHO05D007391 8.9e-52 207.2 110 87.3
AT5G56130 Arabidopsis thaliana HOM05D005961 ORTHO05D007391 8.9e-52 207.2 110 87.3
Sc20g0000030 Simmondsia chinensis HOM05D005961 ORTHO05D007391 8.9e-52 207.2 109 86.2
Aa31LG3G12040 Aethionema arabicum HOM05D005961 ORTHO05D007391 1.2e-51 206.8 110 86.4
Actinidia10589 Actinidia chinensis HOM05D005961 ORTHO05D007391 1.5e-51 206.5 109 85.3
Phvul.006G061900 Phaseolus vulgaris HOM05D005961 ORTHO05D007391 1.5e-51 206.5 109 86.2
Carub.0008s1645 Capsella rubella HOM05D005961 ORTHO05D007391 2.0e-51 206.1 110 86.4
Glyma.08G336200 Glycine max HOM05D005961 ORTHO05D007391 2.0e-51 206.1 109 85.3
THA.LOC104811694 Tarenaya hassleriana HOM05D005961 ORTHO05D007391 2.0e-51 206.1 110 86.4
Glyma.18G071300 Glycine max HOM05D005961 ORTHO05D007391 2.6e-51 205.7 109 85.3
AUR62027451 Chenopodium quinoa HOM05D005961 ORTHO05D007391 3.4e-51 205.3 110 85.5
ClCG10G004540 Citrullus lanatus HOM05D005961 ORTHO05D007391 4.4e-51 204.9 105 89.5
Rhsim06G0234500 Rhododendron simsii HOM05D005961 ORTHO05D007391 4.4e-51 204.9 109 84.4
THA.LOC104813462 Tarenaya hassleriana HOM05D005961 ORTHO05D007391 5.8e-51 204.5 110 86.4
Os09g0298400 Oryza sativa ssp. japonica HOM05D005961 ORTHO05D007391 7.6e-51 204.1 109 81.7
Prupe.6G033200 Prunus persica HOM05D005961 ORTHO05D007391 7.6e-51 204.1 109 86.2
Ca_14870_v3 Cicer arietinum L. HOM05D005961 ORTHO05D007391 9.9e-51 203.8 109 85.3
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 9.9e-51 203.8 109 85.3
MD11G1042100 Malus domestica HOM05D005961 ORTHO05D007391 1.3e-50 203.4 109 85.3
Thhalv10014152m.g Eutrema salsugineum HOM05D005961 ORTHO05D007391 1.7e-50 203.0 119 83.2
SMO232G0112 Selaginella moellendorffii HOM05D005961 ORTHO05D007391 1.7e-50 203.0 117 82.1
Cpa.g.sc12.78 Carica papaya HOM05D005961 ORTHO05D007391 2.9e-50 202.2 110 85.5
Medtr3g061450 Medicago truncatula HOM05D005961 ORTHO05D007391 3.8e-50 201.8 109 84.4
Psat5g164000 Pisum sativum HOM05D005961 ORTHO05D007391 3.8e-50 201.8 109 84.4
Sp6g17980 Schrenkiella parvula HOM05D005961 ORTHO05D007391 6.4e-50 201.1 110 85.5
BcaB08g35978 Brassica carinata HOM05D005961 ORTHO05D007391 1.9e-49 199.5 110 84.5
BcaC04g20139 Brassica carinata HOM05D005961 ORTHO05D007391 1.9e-49 199.5 110 84.5
BraA10t43436Z Brassica rapa HOM05D005961 ORTHO05D007391 1.9e-49 199.5 110 84.5
Atru.BG.128.p Acer truncatum HOM05D005961 ORTHO05D007391 2.4e-49 199.1 104 86.5
BolC9t57585H Brassica oleracea HOM05D005961 ORTHO05D007391 4.2e-49 198.4 110 83.6
Lj8A182T68 Lonicera japonica HOM05D005961 ORTHO05D007391 5.4e-49 198.0 101 89.1
Hma1.2p1_0321F.1_g124230 Hydrangea macrophylla HOM05D005961 ORTHO05D007391 3.5e-48 195.3 99 90.9
AagrBONN_evm.TU.Sc2ySwM_344.3214 Anthoceros agrestis HOM05D005961 ORTHO05D007391 2.3e-47 192.6 101 88.1
RcHm_v2.0_Chr5g0074851 Rosa chinensis HOM05D005961 ORTHO05D007391 9.6e-46 187.2 109 81.7
C09p47280 Brassica napus HOM05D005961 ORTHO05D007391 4.8e-45 184.9 105 82.9
A10p13350 Brassica napus HOM05D005961 ORTHO05D007391 2.4e-44 182.6 101 85.1
arahy.Tifrunner.gnm1.ann1.3II979 Arachis hypogaea HOM05D005961 ORTHO05D007391 4.0e-44 181.8 109 79.8
MD03G1040700 Malus domestica HOM05D005961 ORTHO05D007391 4.0e-44 181.8 109 78.0
Nitab4.5_0000152g0140 Nicotiana tabacum HOM05D005961 ORTHO05D007391 1.2e-43 180.3 109 80.7
TWI38G1629 Tripterygium wilfordii HOM05D005961 ORTHO05D007391 4.4e-43 178.3 101 79.2
FvH4_3g41760 Fragaria vesca HOM05D005961 ORTHO05D007391 7.6e-43 177.6 108 78.7
FAN21G0223 Fragaria x ananassa HOM05D005961 ORTHO05D007391 7.6e-43 177.6 108 78.7
FAN11G0666 Fragaria x ananassa HOM05D005961 ORTHO05D007391 2.3e-39 166.0 91 85.7
FAN25G0503 Fragaria x ananassa HOM05D005961 ORTHO05D007391 1.9e-38 162.9 137 62.0
FvH4_3g41780 Fragaria vesca HOM05D005961 ORTHO05D007391 1.1e-36 157.1 109 69.7
FAN11G3665 Fragaria x ananassa HOM05D005961 ORTHO05D007391 1.1e-36 157.1 109 69.7
FAN16G0538 Fragaria x ananassa HOM05D005961 ORTHO05D007391 1.1e-36 157.1 109 69.7
RcHm_v2.0_Chr5g0074871 Rosa chinensis HOM05D005961 ORTHO05D007391 3.1e-36 155.6 107 70.1
FAN21G0779 Fragaria x ananassa HOM05D005961 ORTHO05D007391 6.9e-36 154.5 109 68.8
Prupe.6G035000 Prunus persica HOM05D005961 ORTHO05D007391 2.6e-35 152.5 89 78.7
FAN25G1059 Fragaria x ananassa HOM05D005961 ORTHO05D007391 4.5e-35 151.8 109 67.0
HPP92_020471 Vanilla planifolia HOM05D005961 ORTHO05D007391 1.8e-31 139.8 76 84.2
CBR_g45305 Chara braunii HOM05D005961 ORTHO05D007391 1.4e-28 130.2 89 64.0
FAN16G2306 Fragaria x ananassa HOM05D005961 ORTHO05D007391 5.8e-27 124.8 78 75.6
Dinv19652 Davidia involucrata HOM05D005961 ORTHO05D007391 1.5e-22 110.2 69 75.4
Zm00001eb309300 Zea mays HOM05D005961 ORTHO05D007391 1.0e-18 97.4 60 71.7
MCO01G336 Micromonas commoda HOM05D005961 ORTHO05D007391 2.7e-16 89.4 88 46.6
Cre12.g559850 Chlamydomonas reinhardtii HOM05D005961 ORTHO05D007391 6.7e-15 84.7 133 35.3
PRCOL_00000749 Prasinoderma coloniale HOM05D005961 ORTHO05D007391 5.7e-14 81.6 110 39.1
Cfa026677 Carpinus fangiana HOM05D005961 ORTHO05D007391 1.6e-13 80.1 115 32.2
SEGI_30376 Sequoiadendron giganteum HOM05D005961 ORTHO05D007391 2.5e-09 66.2 46 71.7
GSVIVG01027911001 Vitis vinifera HOM05D003335 ORTHO05D003853 2.5e-06 56.2 94 34.0
Aqoxy2G03744 Aquilegia oxysepala HOM05D003335 ORTHO05D003853 5.7e-06 55.1 94 34.0


User provided reference genes

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