Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.4e-240 835.1 425 100.0
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 3.1e-147 525.8 417 65.0
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 3.8e-145 518.8 410 63.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 5.5e-144 515.0 415 63.1
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.1e-143 513.1 413 62.2
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.0e-142 510.8 412 61.7
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.8e-142 510.0 412 61.7
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.5e-141 506.9 413 60.5
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 5.7e-141 505.0 410 60.0
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.8e-140 502.7 407 60.4
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 8.2e-140 501.1 411 61.6
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.8e-139 500.0 422 61.4
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 5.3e-139 498.4 407 60.2
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 7.0e-139 498.0 411 62.0
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.5e-138 496.9 407 59.5
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.5e-138 496.9 402 60.7
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 2.0e-138 496.5 413 60.0
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.5e-138 495.4 413 59.8
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 5.9e-138 495.0 412 60.7
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.7e-138 494.6 413 60.0
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 7.7e-138 494.6 413 59.1
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 2.2e-137 493.0 411 60.8
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 3.8e-137 492.3 410 61.2
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.1e-136 490.7 418 60.5
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.4e-136 490.3 415 60.0
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 9.4e-136 487.6 412 60.4
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.2e-135 487.3 412 59.7
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.6e-135 486.9 435 58.6
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 2.1e-135 486.5 410 59.8
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 2.7e-135 486.1 414 58.7
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.6e-135 485.7 417 58.8
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 6.1e-135 485.0 410 59.8
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 6.1e-135 485.0 403 60.5
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 3.0e-134 482.6 412 59.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 3.0e-134 482.6 410 59.0
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 3.9e-134 482.3 414 58.7
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 5.2e-134 481.9 412 58.7
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 8.8e-134 481.1 411 57.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 8.8e-134 481.1 403 60.5
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.1e-133 480.7 402 59.7
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.1e-133 480.7 411 59.6
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 3.3e-133 479.2 410 57.3
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 3.3e-133 479.2 409 58.7
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.3e-133 479.2 410 59.3
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 4.4e-133 478.8 410 58.0
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 4.4e-133 478.8 409 60.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 5.7e-133 478.4 411 58.6
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 9.7e-133 477.6 411 58.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 9.7e-133 477.6 405 59.8
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.2e-132 476.5 411 58.4
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.2e-132 476.5 402 59.7
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 2.8e-132 476.1 405 59.3
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 1.4e-131 473.8 408 58.3
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.8e-131 473.4 414 59.2
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 5.3e-131 471.9 411 58.2
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 7.0e-131 471.5 409 59.9
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 7.0e-131 471.5 413 56.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 9.1e-131 471.1 409 58.9
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.2e-130 470.7 417 57.6
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 2.0e-130 469.9 417 58.8
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 2.6e-130 469.5 405 58.5
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 5.9e-130 468.4 416 57.5
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 5.9e-130 468.4 407 59.2
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.0e-129 467.6 399 60.9
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.3e-129 467.2 456 54.6
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 2.5e-128 463.0 440 54.8
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 3.2e-128 462.6 418 54.1
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 9.4e-128 461.1 402 60.4
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 1.6e-127 460.3 374 62.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 2.7e-127 459.5 457 53.8
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 3.6e-127 459.1 440 54.3
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 4.7e-127 458.8 412 58.0
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 6.1e-127 458.4 457 52.3
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 8.0e-127 458.0 440 54.3
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 8.0e-127 458.0 402 60.2
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.0e-125 453.4 411 57.2
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.4e-123 447.2 360 63.3
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.8e-123 446.8 402 59.0
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.2e-122 444.1 424 56.4
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 4.5e-122 442.2 414 56.5
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.3e-121 440.7 424 54.5
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 8.5e-121 438.0 415 54.0
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.5e-120 437.2 382 60.5
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.2e-119 434.1 335 63.9
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 2.7e-119 433.0 455 50.3
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 6.8e-118 428.3 403 55.3
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.6e-117 426.4 444 51.6
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.6e-117 426.4 477 49.9
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.7e-116 422.5 443 51.7
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 4.8e-116 422.2 416 52.6
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 8.3e-116 421.4 436 51.4
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 1.1e-115 421.0 340 63.5
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.4e-115 419.9 438 53.2
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 5.4e-115 418.7 347 61.4
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 9.1e-115 417.9 425 51.8
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 2.0e-114 416.8 414 54.3
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 1.8e-107 393.7 353 55.8
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.0e-105 387.9 410 50.2
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 7.3e-104 381.7 412 51.5
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 6.8e-102 375.2 315 62.2
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 4.9e-100 369.0 305 62.0
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.1e-95 353.6 376 52.7
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.6e-95 352.8 286 60.8
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.3e-94 350.1 179 98.9
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.2e-85 321.2 283 55.5
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.3e-84 317.8 265 61.5
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.2e-77 294.7 417 41.2
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 4.4e-77 292.7 219 68.0
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 6.4e-76 288.9 258 58.1
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.4e-75 285.8 229 65.5
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.5e-72 277.7 208 66.8
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 6.2e-71 272.3 319 47.6
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.3e-68 264.6 243 56.0
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 3.0e-65 253.4 402 39.6
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 9.6e-64 248.4 358 42.2
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 3.6e-63 246.5 314 44.9
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 5.8e-61 239.2 253 49.8
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 7.1e-59 232.3 224 54.9
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 2.2e-52 210.7 410 36.1
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.9e-51 207.6 104 100.0
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 2.5e-48 197.2 167 62.3
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.4e-45 186.8 125 72.0
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 5.8e-45 186.0 307 38.1
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.1e-43 181.8 137 59.9
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.4e-38 164.9 146 56.8
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 6.9e-38 162.5 138 57.2
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.7e-28 131.3 377 31.3
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.9e-28 130.6 105 56.2
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.1e-27 128.6 103 67.0
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 2.3e-25 120.9 85 74.1
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 3.0e-25 120.6 238 34.5
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 7.2e-19 99.4 149 40.3
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-16 92.0 118 50.0
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 2.0e-16 91.3 95 49.5
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 3.5e-13 80.5 54 72.2
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.5e-12 75.9 65 52.3
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.2e-11 73.9 79 46.8
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 6.1e-10 69.7 319 23.8
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 5.7e-08 63.2 319 24.1
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 5.7e-08 63.2 319 23.2
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 1.7e-07 61.6 271 24.0
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 1.7e-07 61.6 281 23.5
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 2.8e-07 60.8 319 22.9
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 4.8e-07 60.1 345 21.2
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 6.3e-07 59.7 319 22.9
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 6.3e-07 59.7 268 25.4
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 8.3e-07 59.3 268 25.4
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 1.1e-06 58.9 309 22.0
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 1.1e-06 58.9 206 29.1
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 1.4e-06 58.5 284 22.9
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 1.4e-06 58.5 278 24.5
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.4e-06 58.5 269 24.9
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 1.8e-06 58.2 276 25.0
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.8e-06 58.2 183 26.2
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.8e-06 58.2 269 24.9
PGSC0003DMG401012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 1.8e-06 58.2 184 29.3
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 2.4e-06 57.8 281 23.5
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 2.4e-06 57.8 183 29.0
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 2.4e-06 57.8 319 22.3
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 2.4e-06 57.8 319 22.3
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 3.1e-06 57.4 189 24.3
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 3.1e-06 57.4 268 24.3
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 3.1e-06 57.4 320 22.5
GSVIVG01025457001 Vitis vinifera HOM05D004447 ORTHO05D005973 3.1e-06 57.4 300 23.7
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 4.1e-06 57.0 275 24.7
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 4.1e-06 57.0 282 23.4
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 4.1e-06 57.0 320 23.1
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 4.1e-06 57.0 325 22.8
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 7.0e-06 56.2 291 22.7
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 7.0e-06 56.2 307 23.1
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 7.0e-06 56.2 282 24.5
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 7.0e-06 56.2 281 24.2
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 9.1e-06 55.8 275 24.7
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 9.1e-06 55.8 282 24.1
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 9.1e-06 55.8 187 26.7


User provided reference genes

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