Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38414 Sequoiadendron giganteum HOM05D000555 ORTHO05D009378 1.5e-234 815.8 423 100.0
SEGI_17736 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.1e-64 251.5 514 39.9
SEGI_18998 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.4e-60 235.7 568 36.8
SEGI_24053 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 7.8e-58 228.8 494 37.7
SEGI_18039 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.4e-54 218.0 571 35.7
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 5.8e-53 212.6 348 45.4
SEGI_15025 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 9.3e-51 205.3 498 34.9
SEGI_30859 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.0e-49 200.3 570 34.2
SEGI_21908 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 5.6e-48 196.1 533 35.5
SEGI_03795 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 7.3e-48 195.7 534 34.1
SEGI_12693 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 7.6e-45 185.7 512 35.0
SEGI_17662 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.3e-44 184.9 537 33.7
SEGI_29373 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.3e-44 184.9 537 33.7
SEGI_12793 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.2e-44 184.1 436 36.2
SEGI_12759 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.9e-44 183.7 458 35.6
SEGI_31817 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.9e-44 183.7 458 35.6
SEGI_14497 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 9.3e-43 178.7 530 33.6
SEGI_04939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.0e-41 173.7 339 37.5
SEGI_25691 Sequoiadendron giganteum HOM05D002514 ORTHO05D002761 1.0e-33 148.7 312 40.1
SEGI_31942 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.7e-33 146.0 264 40.9
SEGI_12048 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.8e-28 130.2 356 34.8
SEGI_13438 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.1e-27 128.6 256 39.1
SEGI_23599 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 1.8e-25 121.3 182 46.2
SEGI_00154 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.6e-23 114.8 272 31.2
SEGI_11133 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.0e-21 107.8 247 34.8
SEGI_34006 Sequoiadendron giganteum HOM05D000688 ORTHO05D003888 2.0e-21 107.8 199 39.7
SEGI_31316 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.2e-20 104.4 236 35.6
SEGI_26766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.4e-19 99.0 314 32.5
SEGI_39840 Sequoiadendron giganteum HOM05D042540 ORTHO05D006116 3.0e-17 94.0 127 47.2
SEGI_36218 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 5.1e-17 93.2 132 44.7
SEGI_39939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.8e-14 84.7 341 28.4
SEGI_00475 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.9e-12 77.4 243 31.3
SEGI_40495 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.2e-10 72.0 117 38.5
SEGI_14642 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.7e-10 70.1 94 47.9
SEGI_40801 Sequoiadendron giganteum HOM05D003314 ORTHO05D000285 6.1e-10 69.7 151 35.8
SEGI_41300 Sequoiadendron giganteum HOM05D003314 ORTHO05D015881 6.1e-10 69.7 151 35.8
SEGI_16249 Sequoiadendron giganteum HOM05D000555 ORTHO05D006624 1.0e-09 68.9 228 31.6
SEGI_05850 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.8e-09 68.2 264 27.7
Pp3c23_10270 Physcomitrium patens HOM05D000555 ORTHO05D001906 2.3e-09 67.8 90 36.7
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 6.7e-09 66.2 106 43.4
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 1.5e-08 65.1 173 33.5
BcaC06g34231 Brassica carinata HOM05D000555 ORTHO05D001906 3.3e-08 63.9 92 37.0
BolC7t43676H Brassica oleracea HOM05D000555 ORTHO05D001906 3.3e-08 63.9 92 37.0
Sp2g12400 Schrenkiella parvula HOM05D000555 ORTHO05D001906 4.4e-08 63.5 92 37.0
SEGI_29820 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.4e-08 63.5 86 39.5
AagrBONN_evm.TU.Sc2ySwM_344.2222 Anthoceros agrestis HOM05D000555 ORTHO05D001906 9.7e-08 62.4 85 32.9
BcaC03g16985 Brassica carinata HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 34.8
A02p31510 Brassica napus HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 35.9
A06p44850 Brassica napus HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 35.9
C07p31350 Brassica napus HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 35.9
BolC2t10981H Brassica oleracea HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 34.8
BraA06t27357Z Brassica rapa HOM05D000555 ORTHO05D001906 9.7e-08 62.4 92 35.9
Pp3c10_24900 Physcomitrium patens HOM05D000555 ORTHO05D001906 9.7e-08 62.4 56 46.4
BcaC06g31349 Brassica carinata HOM05D000555 ORTHO05D001906 1.3e-07 62.0 92 35.9
SEGI_34016 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.7e-07 61.6 66 43.9
BraA02t08154Z Brassica rapa HOM05D000555 ORTHO05D001906 2.2e-07 61.2 92 34.8
Thhalv10000739m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 2.2e-07 61.2 90 36.7
Lalb_Chr24g0402031 Lupinus albus HOM05D000555 ORTHO05D000646 2.2e-07 61.2 88 35.2
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.8e-07 60.8 450 24.0
Ca_00764_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 3.7e-07 60.5 86 38.4
Hund21131 Selenicereus undatus HOM05D000555 ORTHO05D001906 3.7e-07 60.5 90 34.4
SEGI_28918 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.7e-07 60.5 88 38.6
Ciclev10007391m.g Citrus clementina HOM05D000555 ORTHO05D000646 4.8e-07 60.1 88 36.4
Lalb_Chr22g0361371 Lupinus albus HOM05D000555 ORTHO05D000646 4.8e-07 60.1 86 34.9
C02p48870 Brassica napus HOM05D000555 ORTHO05D001906 6.3e-07 59.7 92 34.8
AT5G47690 Arabidopsis thaliana HOM05D000555 ORTHO05D001906 8.2e-07 59.3 90 35.6
Carub.0008s0009 Capsella rubella HOM05D000555 ORTHO05D001906 8.2e-07 59.3 90 35.6
Lalb_Chr14g0361791 Lupinus albus HOM05D000555 ORTHO05D000646 8.2e-07 59.3 88 35.2
Peaxi162Scf00827g00520 Petunia axillaris HOM05D000555 ORTHO05D001906 8.2e-07 59.3 86 34.9
THA.LOC104803856 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 8.2e-07 59.3 92 33.7
TPR.G17534 Trifolium pratense HOM05D000555 ORTHO05D001906 8.2e-07 59.3 88 37.5
Aa31sc219G80 Aethionema arabicum HOM05D000555 ORTHO05D001906 1.1e-06 58.9 90 35.6
CAN.G1156.22 Capsicum annuum HOM05D000555 ORTHO05D001906 1.1e-06 58.9 86 32.6
Lalb_Chr18g0057331 Lupinus albus HOM05D000555 ORTHO05D000646 1.1e-06 58.9 86 37.2
Nitab4.5_0001296g0110 Nicotiana tabacum HOM05D000555 ORTHO05D001906 1.1e-06 58.9 86 34.9
TAR626G1146 Trochodendron aralioides HOM05D000555 ORTHO05D000646 1.1e-06 58.9 92 33.7
unitig_748.g8261 Utricularia gibba HOM05D000555 ORTHO05D000646 1.1e-06 58.9 82 31.7
Glyma.17G005500 Glycine max HOM05D000555 ORTHO05D001906 1.4e-06 58.5 88 35.2
Psat1g172440 Pisum sativum HOM05D000555 ORTHO05D001906 1.4e-06 58.5 86 36.0
THA.LOC104822541 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 1.4e-06 58.5 92 32.6
Zm00001eb184560 Zea mays HOM05D000555 ORTHO05D000646 1.4e-06 58.5 93 32.3
Zm00001eb246990 Zea mays HOM05D000555 ORTHO05D000646 1.4e-06 58.5 93 32.3
CARHR173620 Cardamine hirsuta HOM05D000555 ORTHO05D001906 1.8e-06 58.2 90 34.4
CDE05G0042 Ceratophyllum demersum HOM05D000555 ORTHO05D000646 1.8e-06 58.2 88 35.2
Ca_14564_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 1.8e-06 58.2 88 36.4
Medtr2g027090 Medicago truncatula HOM05D000555 ORTHO05D001906 1.8e-06 58.2 86 36.0
Pp3c20_23000 Physcomitrium patens HOM05D000555 ORTHO05D001906 1.8e-06 58.2 59 40.7
Hund19590 Selenicereus undatus HOM05D000555 ORTHO05D000646 1.8e-06 58.2 88 36.4
THA.LOC104812796 Tarenaya hassleriana HOM05D000555 ORTHO05D001906 1.8e-06 58.2 90 36.7
HPP92_020436 Vanilla planifolia HOM05D000555 ORTHO05D000646 1.8e-06 58.2 92 34.8
Manes.16G128500 Manihot esculenta HOM05D000555 ORTHO05D000646 2.4e-06 57.8 92 31.5
AUR62012473 Chenopodium quinoa HOM05D000555 ORTHO05D000646 3.1e-06 57.4 88 35.2
AUR62031599 Chenopodium quinoa HOM05D000555 ORTHO05D000646 3.1e-06 57.4 88 35.2
DCAR_022853 Daucus carota HOM05D000555 ORTHO05D000646 3.1e-06 57.4 94 34.0
Lj1g0004939 Lotus japonicus HOM05D000555 ORTHO05D000646 3.1e-06 57.4 88 36.4
Potri.002G084300 Populus trichocarpa HOM05D000555 ORTHO05D001906 3.1e-06 57.4 81 38.3
RcHm_v2.0_Chr6g0299571 Rosa chinensis HOM05D000555 ORTHO05D000646 3.1e-06 57.4 94 34.0
Sabra02G0065900 Salix brachista HOM05D000555 ORTHO05D001906 3.1e-06 57.4 80 37.5
Ah.10g035500 Amaranthus hybridus HOM05D000555 ORTHO05D000646 4.1e-06 57.0 90 33.3
AL8G10260 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 4.1e-06 57.0 90 34.4
CDE02G2254 Ceratophyllum demersum HOM05D000555 ORTHO05D000646 4.1e-06 57.0 88 35.2
Solyc11g012770.2 Solanum lycopersicum HOM05D000555 ORTHO05D001906 4.1e-06 57.0 86 32.6
Sopen11g007510 Solanum pennellii HOM05D000555 ORTHO05D001906 4.1e-06 57.0 86 32.6
TWI34G0075 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 4.1e-06 57.0 88 34.1
CiPaw.07G229100 Carya illinoinensis HOM05D000555 ORTHO05D000646 5.3e-06 56.6 88 35.2
Cc08_g00030 Coffea canephora HOM05D000555 ORTHO05D000646 5.3e-06 56.6 92 32.6
MBI15_g07758_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D000646 5.3e-06 56.6 92 32.6
Phvul.009G087900 Phaseolus vulgaris HOM05D000555 ORTHO05D000646 5.3e-06 56.6 88 35.2
Potri.006G263300 Populus trichocarpa HOM05D000555 ORTHO05D000646 5.3e-06 56.6 88 34.1
QL02p019527 Quercus lobata HOM05D000555 ORTHO05D000646 5.3e-06 56.6 88 35.2
Sabra06G0205500 Salix brachista HOM05D000555 ORTHO05D000646 5.3e-06 56.6 88 34.1
TPR.G8250 Trifolium pratense HOM05D000555 ORTHO05D001906 5.3e-06 56.6 88 33.0
ATR0739G166 Amborella trichopoda HOM05D000555 ORTHO05D000646 7.0e-06 56.2 88 34.1
arahy.Tifrunner.gnm1.ann1.028SBR Arachis hypogaea HOM05D000555 ORTHO05D001906 7.0e-06 56.2 90 33.3
arahy.Tifrunner.gnm1.ann1.1A3YDX Arachis hypogaea HOM05D000555 ORTHO05D001906 7.0e-06 56.2 90 33.3
arahy.Tifrunner.gnm1.ann1.QZG3GX Arachis hypogaea HOM05D000555 ORTHO05D000646 7.0e-06 56.2 86 31.4
CAN.G199.62 Capsicum annuum HOM05D000555 ORTHO05D000646 7.0e-06 56.2 92 33.7
Prupe.1G392500 Prunus persica HOM05D000555 ORTHO05D000646 7.0e-06 56.2 88 36.4
PGR044G2569 Punica granatum HOM05D000555 ORTHO05D000646 7.0e-06 56.2 86 33.7
SEGI_14130 Sequoiadendron giganteum HOM05D000555 ORTHO05D001906 7.0e-06 56.2 88 28.4
Sc23g0006420 Simmondsia chinensis HOM05D000555 ORTHO05D000646 7.0e-06 56.2 88 37.5
Atru.chr7.2535 Acer truncatum HOM05D000555 ORTHO05D000646 9.1e-06 55.8 86 31.4
CiPaw.10G082000 Carya illinoinensis HOM05D000555 ORTHO05D001906 9.1e-06 55.8 90 35.6
ClCG01G011160 Citrullus lanatus HOM05D000555 ORTHO05D001906 9.1e-06 55.8 90 33.3
DCAR_006266 Daucus carota HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 33.0
Glyma.04G061800 Glycine max HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 35.2
Psat5g043920 Pisum sativum HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 34.1
SalBow4G0223 Salvia bowleyana HOM05D000555 ORTHO05D000646 9.1e-06 55.8 86 29.1
Sed0016925 Sechium edule HOM05D000555 ORTHO05D001906 9.1e-06 55.8 90 33.3
Hund03457 Selenicereus undatus HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 35.2
SEGI_11827 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 9.1e-06 55.8 152 32.2
SEGI_34442 Sequoiadendron giganteum HOM05D011934 ORTHO05D012968 9.1e-06 55.8 72 47.2
Solyc06g065710.3 Solanum lycopersicum HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 35.2
Sopen06g024230 Solanum pennellii HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 35.2
TWI32G0001 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 9.1e-06 55.8 88 33.0
TAR636G1427 Trochodendron aralioides HOM05D000555 ORTHO05D000646 9.1e-06 55.8 92 33.7
unitig_32.g10892 Utricularia gibba HOM05D000555 ORTHO05D000646 9.1e-06 55.8 108 27.8


User provided reference genes

Program Settings