Gene: Solyc06g065710.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc06g065710.3
Transcript Identifier Solyc06g065710.3.1
Gene Type Coding gene
Location SL4.0ch06 : 38780980-38791738 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000555
#Genes/#Species 991/100
Phylogenetic origin

ID ORTHO05D000646
#Genes/#Species 715/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc06g065710.3.1
uniprot A0A3Q7HSC9
gene_id Solyc06g065710

Descriptions

Short descriptions
Ortholog descriptions

Description Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0007064	IBA IEA	GOA Database	mitotic sister chromatid cohesion
GO:0007064	IEA	InterPro	mitotic sister chromatid cohesion
GO:0007049	IEA	GOA Database	cell cycle
GO:0051301	IEA	GOA Database	cell division
GO:0006281	IBA	GOA Database	DNA repair
GO:0006310	ISO	PLAZA Integrative Orthology	DNA recombination	AT4G31880
GO:0009556	ISO	PLAZA Integrative Orthology	microsporogenesis	AT4G31880
GO:0035825	ISO	PLAZA Integrative Orthology	homologous recombination	AT4G31880

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA IEA	GOA Database	nucleus
GO:0000785	IBA	GOA Database	chromatin
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT1G15940
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G31880

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR039776	Sister chromatid cohesion protein Pds5
IPR011989	Armadillo-like helical
IPR016024	Armadillo-type fold

Mapman id	Description
13.3.4.3.2	Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin establishment.cohesin cofactor (PDS5)