Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 4.0e-69 264.6 130 100.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 2.9e-48 195.3 117 77.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 2.9e-48 195.3 116 79.3
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 8.6e-48 193.7 117 76.1
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.1e-47 193.4 116 76.7
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.5e-47 193.0 121 76.0
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.9e-47 192.6 116 77.6
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 77.6
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 77.6
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 77.6
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 77.6
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 75.9
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 76.7
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 76.7
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 3.3e-47 191.8 116 78.4
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.3e-47 191.4 116 78.4
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 4.3e-47 191.4 116 78.4
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.3e-47 191.4 116 77.6
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.3e-47 191.4 116 77.6
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 4.3e-47 191.4 116 76.7
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 5.6e-47 191.0 116 78.4
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 7.3e-47 190.7 116 77.6
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 7.3e-47 190.7 116 76.7
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 7.3e-47 190.7 116 77.6
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 9.5e-47 190.3 116 76.7
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 9.5e-47 190.3 116 77.6
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 9.5e-47 190.3 114 78.9
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 1.2e-46 189.9 116 77.6
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.2e-46 189.9 119 74.8
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.6e-46 189.5 116 76.7
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.6e-46 189.5 119 75.6
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.6e-46 189.5 116 75.9
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.6e-46 189.5 116 76.7
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.1e-46 189.1 116 76.7
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.1e-46 189.1 116 76.7
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 2.1e-46 189.1 116 76.7
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 2.8e-46 188.7 119 75.6
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 3.6e-46 188.3 116 77.6
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 3.6e-46 188.3 116 75.9
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.6e-46 188.3 116 75.9
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 3.6e-46 188.3 116 78.4
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 4.7e-46 188.0 119 74.8
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 4.7e-46 188.0 116 72.4
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 4.7e-46 188.0 116 75.0
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 6.1e-46 187.6 116 75.0
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 6.1e-46 187.6 116 75.9
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.0e-45 186.8 116 74.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.0e-45 186.8 115 76.5
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.4e-45 186.4 117 74.4
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.4e-45 186.4 116 75.9
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 1.4e-45 186.4 116 75.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.8e-45 186.0 117 72.6
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.3e-45 185.7 116 74.1
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.1e-45 185.3 116 72.4
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 4.0e-45 184.9 116 74.1
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 4.0e-45 184.9 116 74.1
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.0e-45 184.9 116 74.1
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 5.2e-45 184.5 116 74.1
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.2e-45 184.5 119 73.1
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 1.2e-44 183.3 116 73.3
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 2.0e-44 182.6 116 74.1
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 2.0e-44 182.6 116 74.1
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.6e-44 182.2 115 73.0
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 3.4e-44 181.8 117 72.6
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 3.4e-44 181.8 116 72.4
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.4e-44 181.8 116 75.0
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 4.4e-44 181.4 115 75.7
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.4e-44 181.4 117 72.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 7.5e-44 180.6 116 72.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 7.5e-44 180.6 116 72.4
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 7.5e-44 180.6 117 70.9
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 1.3e-43 179.9 116 72.4
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.3e-43 179.9 117 71.8
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.3e-43 179.9 116 75.0
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.3e-43 179.9 116 71.6
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.7e-43 179.5 117 71.8
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.7e-43 179.5 117 71.8
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.7e-43 179.5 117 71.8
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.7e-43 179.5 116 71.6
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.7e-43 179.5 116 71.6
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.2e-43 179.1 116 71.6
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.2e-43 179.1 116 72.4
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.9e-43 178.7 116 73.3
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 2.9e-43 178.7 129 68.2
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 4.9e-43 177.9 116 72.4
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 6.4e-43 177.6 117 71.8
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 6.4e-43 177.6 117 70.9
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 8.3e-43 177.2 124 66.9
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 8.3e-43 177.2 115 72.2
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 8.3e-43 177.2 116 72.4
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 1.4e-42 176.4 115 72.2
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.9e-42 176.0 110 74.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 2.4e-42 175.6 117 70.9
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.4e-42 175.6 117 69.2
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 3.2e-42 175.3 115 72.2
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.2e-41 173.3 116 70.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.7e-41 172.2 116 70.7
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.8e-37 159.5 130 59.2
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 4.9e-35 151.4 114 64.9
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.2e-34 148.7 127 57.5
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 5.4e-34 147.9 89 79.8
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.6e-33 146.4 89 78.7
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.5e-33 145.2 89 76.4
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.5e-33 145.2 88 78.4
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.3e-32 143.3 118 58.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 3.0e-32 142.1 104 63.5
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.2e-28 130.2 129 55.0
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 3.4e-28 128.6 115 60.0
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 2.9e-27 125.6 104 61.5
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.4e-26 123.2 77 76.6
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 2.3e-24 115.9 88 63.6
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 9.9e-20 100.5 90 57.8
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.7e-19 99.8 52 88.5
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 9.6e-15 84.0 64 68.8
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 8.1e-14 80.9 75 56.0
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 6.2e-06 54.7 43 60.5


User provided reference genes

Program Settings