Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37982 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.1e-50 203.0 99 100.0
SEGI_16352 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 5.7e-44 180.6 94 92.6
SEGI_22812 Sequoiadendron giganteum HOM05D014429 ORTHO05D003561 8.3e-43 176.8 90 93.3
SEGI_18915 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 3.5e-41 171.4 86 94.2
SEGI_09967 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.8e-38 161.8 99 81.8
SEGI_32224 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 5.0e-32 141.0 71 91.5
SEGI_25943 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.0e-30 133.7 69 88.4
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 6.8e-13 77.4 77 55.8
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 5.4e-10 67.8 86 44.2
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 2.7e-09 65.5 76 44.7
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 2.7e-09 65.5 77 45.5
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 2.7e-09 65.5 76 47.4
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 4.6e-09 64.7 76 44.7
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 4.6e-09 64.7 76 43.4
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 6.0e-09 64.3 76 46.1
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 7.8e-09 63.9 72 45.8
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 7.8e-09 63.9 77 45.5
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.0e-08 63.5 77 42.9
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 1.0e-08 63.5 76 44.7
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 1.3e-08 63.2 76 43.4
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 1.3e-08 63.2 78 41.0
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 1.3e-08 63.2 76 44.7
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.7e-08 62.8 76 44.7
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.7e-08 62.8 82 43.9
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.7e-08 62.8 76 44.7
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.7e-08 62.8 76 43.4
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 3.0e-08 62.0 77 44.2
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 3.0e-08 62.0 77 44.2
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 3.0e-08 62.0 76 43.4
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 3.0e-08 62.0 76 43.4
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 3.9e-08 61.6 76 42.1
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 3.9e-08 61.6 76 42.1
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 5.1e-08 61.2 75 42.7
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 5.1e-08 61.2 76 43.4
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 5.1e-08 61.2 76 46.1
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 5.1e-08 61.2 76 43.4
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 6.6e-08 60.8 76 42.1
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 6.6e-08 60.8 76 42.1
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 6.6e-08 60.8 76 43.4
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 1.1e-07 60.1 78 38.5
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 1.1e-07 60.1 78 38.5
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 1.1e-07 60.1 78 38.5
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 44.7
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 40.8
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 40.8
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 42.1
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 42.1
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 1.1e-07 60.1 77 42.9
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 1.1e-07 60.1 77 42.9
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 43.4
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 1.1e-07 60.1 76 42.1
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.5e-07 59.7 76 42.1
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 1.5e-07 59.7 76 42.1
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 1.5e-07 59.7 76 46.1
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.5e-07 59.7 76 42.1
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 1.5e-07 59.7 75 42.7
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 1.5e-07 59.7 76 43.4
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 1.9e-07 59.3 76 39.5
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 1.9e-07 59.3 77 41.6
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.9e-07 59.3 76 42.1
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 1.9e-07 59.3 76 43.4
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 1.9e-07 59.3 76 43.4
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 1.9e-07 59.3 76 43.4
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 3.3e-07 58.5 74 43.2
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.3e-07 58.5 76 42.1
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 3.3e-07 58.5 76 43.4
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 3.3e-07 58.5 76 39.5
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 3.3e-07 58.5 76 40.8
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 38.2
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 38.2
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 39.5
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.3e-07 58.2 73 41.1
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 39.5
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 40.8
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 4.3e-07 58.2 74 43.2
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 4.3e-07 58.2 74 41.9
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 4.3e-07 58.2 72 38.9
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 4.3e-07 58.2 76 39.5
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 5.6e-07 57.8 76 38.2
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 5.6e-07 57.8 72 38.9
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 5.6e-07 57.8 76 39.5
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 7.3e-07 57.4 78 38.5
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 7.3e-07 57.4 78 37.2
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 7.3e-07 57.4 76 38.2
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 9.5e-07 57.0 76 40.8
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 9.5e-07 57.0 76 39.5
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 9.5e-07 57.0 76 39.5
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 9.5e-07 57.0 76 39.5
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 1.2e-06 56.6 75 44.0
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 1.2e-06 56.6 74 40.5
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 1.2e-06 56.6 78 38.5
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 1.2e-06 56.6 78 37.2
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 1.6e-06 56.2 76 39.5
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 1.6e-06 56.2 69 44.9
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 1.6e-06 56.2 69 43.5
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 2.1e-06 55.8 78 37.2
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 2.8e-06 55.5 78 37.2
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 2.8e-06 55.5 78 37.2
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 2.8e-06 55.5 76 40.8
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 2.8e-06 55.5 80 40.0
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.8e-06 55.5 78 37.2
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 2.8e-06 55.5 76 42.1
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 3.6e-06 55.1 76 39.5
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 3.6e-06 55.1 78 35.9
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 3.6e-06 55.1 76 42.1
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 4.7e-06 54.7 74 40.5
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 4.7e-06 54.7 76 40.8
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 4.7e-06 54.7 76 39.5
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 6.2e-06 54.3 78 35.9
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 6.2e-06 54.3 78 35.9
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 6.2e-06 54.3 76 40.8
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 6.2e-06 54.3 74 40.5
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 6.2e-06 54.3 67 43.3
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 8.1e-06 53.9 76 40.8
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 8.1e-06 53.9 76 40.8


User provided reference genes

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