Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37742 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 2.8e-67 258.5 130 100.0
SEGI_03130 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 1.5e-55 219.5 112 100.0
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 6.1e-46 187.6 115 78.3
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 1.4e-45 186.4 115 78.3
Cpa.g.sc162.3 Carica papaya HOM05D003159 ORTHO05D003780 1.8e-45 186.0 117 76.9
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 2.3e-45 185.7 121 74.4
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 2.3e-45 185.7 115 77.4
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 3.1e-45 185.3 115 76.5
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 4.0e-45 184.9 115 77.4
Zm00001eb120570 Zea mays HOM05D003159 ORTHO05D003780 4.0e-45 184.9 115 75.7
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 5.2e-45 184.5 115 75.7
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 5.2e-45 184.5 115 77.4
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 5.2e-45 184.5 115 77.4
Zm00001eb284760 Zea mays HOM05D003159 ORTHO05D003780 5.2e-45 184.5 115 74.8
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 6.8e-45 184.1 115 76.5
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 6.8e-45 184.1 115 76.5
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 1.5e-44 183.0 115 75.7
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 1.5e-44 183.0 115 73.9
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 1.5e-44 183.0 115 76.5
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 1.5e-44 183.0 115 75.7
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 2.0e-44 182.6 115 76.5
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 2.0e-44 182.6 115 76.5
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 2.0e-44 182.6 115 73.9
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 2.0e-44 182.6 115 76.5
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.4e-44 181.8 115 75.7
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.4e-44 181.8 115 75.7
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.4e-44 181.8 115 75.7
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 3.4e-44 181.8 115 75.7
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 3.4e-44 181.8 115 74.8
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 4.4e-44 181.4 115 74.8
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 4.4e-44 181.4 115 75.7
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 4.4e-44 181.4 114 75.4
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 5.8e-44 181.0 115 75.7
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 5.8e-44 181.0 115 75.7
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 5.8e-44 181.0 115 74.8
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 73.9
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 75.7
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 74.8
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 73.9
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 75.7
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 74.8
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 74.8
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 7.5e-44 180.6 115 75.7
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 9.8e-44 180.3 115 75.7
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 9.8e-44 180.3 115 74.8
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 9.8e-44 180.3 115 74.8
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 9.8e-44 180.3 115 72.2
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 1.3e-43 179.9 115 74.8
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 1.3e-43 179.9 115 74.8
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 1.3e-43 179.9 115 73.9
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 1.3e-43 179.9 115 73.9
FAN12G0237 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.7e-43 179.5 116 73.3
Sabra19G0025800 Salix brachista HOM05D003159 ORTHO05D003780 1.7e-43 179.5 116 76.7
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 2.2e-43 179.1 115 75.7
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 2.2e-43 179.1 115 73.9
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 2.2e-43 179.1 115 73.0
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 2.2e-43 179.1 115 73.9
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 2.9e-43 178.7 115 73.9
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 2.9e-43 178.7 115 73.0
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 2.9e-43 178.7 121 71.9
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.9
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.9
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.9
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.9
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.9
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 3.7e-43 178.3 115 73.0
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 73.9
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 71.3
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 73.0
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 73.0
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 73.0
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 73.9
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 72.2
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 4.9e-43 177.9 115 72.2
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 6.4e-43 177.6 115 73.0
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 6.4e-43 177.6 115 73.0
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 6.4e-43 177.6 116 75.0
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 6.4e-43 177.6 120 73.3
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 6.4e-43 177.6 115 71.3
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 6.4e-43 177.6 115 73.9
AagrBONN_evm.TU.Sc2ySwM_368.1733 Anthoceros agrestis HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 74.8
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 73.0
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 73.0
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 73.9
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 73.9
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 8.3e-43 177.2 108 74.1
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 73.0
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 8.3e-43 177.2 115 75.7
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 1.1e-42 176.8 115 72.2
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 1.1e-42 176.8 115 73.9
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 1.1e-42 176.8 115 72.2
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 1.4e-42 176.4 115 72.2
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 1.4e-42 176.4 115 73.0
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 1.9e-42 176.0 115 73.0
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 2.4e-42 175.6 115 72.2
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 2.4e-42 175.6 115 73.0
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 3.2e-42 175.3 115 72.2
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 3.2e-42 175.3 115 72.2
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 3.2e-42 175.3 115 72.2
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 4.1e-42 174.9 115 74.8
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 4.1e-42 174.9 115 72.2
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 5.4e-42 174.5 120 69.2
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 5.4e-42 174.5 115 71.3
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 7.0e-42 174.1 107 75.7
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 9.2e-42 173.7 115 72.2
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 9.2e-42 173.7 115 72.2
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 1.2e-41 173.3 115 72.2
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 1.2e-41 173.3 119 69.7
SHI06090 Sapria himalayana HOM05D003159 ORTHO05D003780 1.2e-41 173.3 112 73.2
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 1.6e-41 172.9 121 71.1
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 1.6e-41 172.9 113 72.6
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 2.0e-41 172.6 115 72.2
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 2.0e-41 172.6 115 70.4
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.0e-41 172.6 117 70.9
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 2.0e-41 172.6 114 71.9
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 2.7e-41 172.2 115 70.4
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 2.7e-41 172.2 115 72.2
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 2.7e-41 172.2 115 70.4
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 4.6e-41 171.4 115 72.2
Atru.chr2.869 Acer truncatum HOM05D003159 ORTHO05D003780 6.0e-41 171.0 115 71.3
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 6.0e-41 171.0 121 70.2
Actinidia06676 Actinidia chinensis HOM05D003159 ORTHO05D003780 1.0e-40 170.2 115 70.4
DCAR_028953 Daucus carota HOM05D003159 ORTHO05D003780 1.0e-40 170.2 108 74.1
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 1.7e-40 169.5 108 70.4
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.9e-40 168.3 131 64.9
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 6.6e-40 167.5 115 70.4
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 6.6e-40 167.5 115 70.4
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.5e-39 165.6 131 64.1
Rhsim05G0177800 Rhododendron simsii HOM05D003159 ORTHO05D000029 7.3e-39 164.1 122 69.7
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 9.5e-39 163.7 124 65.3
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.2e-38 163.3 104 71.2
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 3.6e-38 161.8 115 67.0
QL03p028499 Quercus lobata HOM05D003159 ORTHO05D003780 1.5e-36 156.4 115 67.8
Lsat_1_v5_gn_9_121981 Lactuca sativa HOM05D003159 ORTHO05D003780 9.8e-36 153.7 95 74.7
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 4.1e-34 148.3 111 66.7
Peaxi162Scf00135g01116 Petunia axillaris HOM05D003159 ORTHO05D003780 2.1e-33 146.0 88 77.3
Lalb_Chr06g0166701 Lupinus albus HOM05D003159 ORTHO05D003780 1.5e-31 139.8 96 69.8
Lalb_Chr06g0166731 Lupinus albus HOM05D003159 ORTHO05D003780 1.5e-31 139.8 96 69.8
Cre12.g503300 Chlamydomonas reinhardtii HOM05D003159 ORTHO05D003780 7.3e-31 137.5 113 56.6
PRCOL_00005277 Prasinoderma coloniale HOM05D003159 ORTHO05D003780 1.5e-28 129.8 115 58.3
PGSC0003DMG400002182 Solanum tuberosum HOM05D003159 ORTHO05D003780 1.3e-27 126.7 73 78.1
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 1.7e-27 126.3 115 59.1
MCO10G267 Micromonas commoda HOM05D003159 ORTHO05D003780 1.4e-26 123.2 107 54.2
PSO782G2873 Papaver somniferum HOM05D003159 ORTHO05D003780 9.2e-26 120.6 84 67.9
Lsat_1_v5_gn_3_106720 Lactuca sativa HOM05D003159 ORTHO05D003780 1.7e-24 116.3 114 48.2
CSS0018975 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 3.0e-24 115.5 86 66.3
FAN11G2158 Fragaria x ananassa HOM05D003159 ORTHO05D003780 5.1e-24 114.8 106 55.7
Cfa025150 Carpinus fangiana HOM05D003159 ORTHO05D003780 4.3e-23 111.7 115 53.9
CDE05G1140 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 9.5e-23 110.5 77 68.8
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 1.4e-21 106.7 101 58.4
Haze_27599 Corylus avellana HOM05D003159 ORTHO05D003780 1.7e-16 89.7 113 46.0
FAN09G4428 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.9e-11 71.6 59 61.0
FAN20G0704 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.4e-10 69.3 58 60.3
FAN02G3581 Fragaria x ananassa HOM05D001720 ORTHO05D001813 2.1e-09 66.2 51 64.7


User provided reference genes

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