Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37686 Sequoiadendron giganteum HOM05D003618 ORTHO05D004302 3.1e-273 944.5 473 100.0
Peaxi162Scf00017g02915 Petunia axillaris HOM05D003618 ORTHO05D004302 1.2e-219 766.5 472 80.9
Solyc03g114340.3 Solanum lycopersicum HOM05D003618 ORTHO05D004302 1.2e-219 766.5 472 82.0
Sopen03g033440 Solanum pennellii HOM05D003618 ORTHO05D004302 1.2e-219 766.5 472 82.0
Gohir.D09G167500 Gossypium hirsutum HOM05D003618 ORTHO05D004302 2.9e-218 761.9 470 81.1
Cc04_g14010 Coffea canephora HOM05D003618 ORTHO05D004302 3.8e-218 761.5 466 81.5
Nitab4.5_0007719g0010 Nicotiana tabacum HOM05D003618 ORTHO05D004302 3.8e-218 761.5 471 81.3
Gorai.006G189200 Gossypium raimondii HOM05D003618 ORTHO05D004302 4.9e-218 761.1 470 81.3
Eucgr.B00316 Eucalyptus grandis HOM05D003618 ORTHO05D004302 1.1e-217 760.0 466 80.9
Gohir.A09G171800 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.1e-217 760.0 470 80.9
QL10p011706 Quercus lobata HOM05D003618 ORTHO05D004302 1.9e-217 759.2 463 80.3
Nitab4.5_0009783g0020 Nicotiana tabacum HOM05D003618 ORTHO05D004302 9.2e-217 756.9 471 80.9
SGA_v2.0_scaffold90G27940 Striga asiatica HOM05D003618 ORTHO05D004302 9.2e-217 756.9 472 81.4
Os01g0106900 Oryza sativa ssp. japonica HOM05D003618 ORTHO05D004302 1.6e-216 756.1 473 80.5
CSS0045852 Camellia sinensis var. sinensis HOM05D003618 ORTHO05D004302 2.7e-216 755.4 469 79.7
CARHR276570 Cardamine hirsuta HOM05D003618 ORTHO05D004302 2.7e-216 755.4 439 84.1
TAR629G0089 Trochodendron aralioides HOM05D003618 ORTHO05D004302 2.7e-216 755.4 465 80.9
Manes.14G065900 Manihot esculenta HOM05D003618 ORTHO05D004302 4.6e-216 754.6 475 79.6
C09p08850 Brassica napus HOM05D003618 ORTHO05D004302 1.3e-215 753.1 460 80.9
BolC9t53797H Brassica oleracea HOM05D003618 ORTHO05D004302 1.3e-215 753.1 460 80.9
Haze_07469 Corylus avellana HOM05D003618 ORTHO05D004302 1.7e-215 752.7 469 79.7
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 3.0e-215 751.9 430 84.9
BcaC04g23393 Brassica carinata HOM05D003618 ORTHO05D004302 3.0e-215 751.9 460 80.9
Lsat_1_v5_gn_5_14440 Lactuca sativa HOM05D003618 ORTHO05D004302 3.0e-215 751.9 445 82.5
A09p07850 Brassica napus HOM05D003618 ORTHO05D004302 3.9e-215 751.5 460 80.9
Cfa019131 Carpinus fangiana HOM05D003618 ORTHO05D004302 3.9e-215 751.5 430 84.9
Glyma.05G037500 Glycine max HOM05D003618 ORTHO05D004302 6.6e-215 750.7 440 83.6
Potri.012G080900 Populus trichocarpa HOM05D003618 ORTHO05D004302 6.6e-215 750.7 463 81.0
CiPaw.11G026400 Carya illinoinensis HOM05D003618 ORTHO05D004302 8.6e-215 750.4 465 79.8
HanXRQChr09g0272201 Helianthus annuus HOM05D003618 ORTHO05D004302 8.6e-215 750.4 474 79.5
AL8G39750 Arabidopsis lyrata HOM05D003618 ORTHO05D004302 1.9e-214 749.2 449 82.2
FvH4_5g05300 Fragaria vesca HOM05D003618 ORTHO05D004302 1.9e-214 749.2 418 86.8
DCAR_026133 Daucus carota HOM05D003618 ORTHO05D004302 2.5e-214 748.8 471 79.2
BcaNung01381 Brassica carinata HOM05D003618 ORTHO05D004302 3.3e-214 748.4 449 82.0
COL.COLO4_30036 Corchorus olitorius HOM05D003618 ORTHO05D004302 4.3e-214 748.0 475 79.8
FAN18G3775 Fragaria x ananassa HOM05D003618 ORTHO05D004302 7.3e-214 747.3 467 79.7
Oeu035988.1 Olea europaea HOM05D003618 ORTHO05D004302 9.6e-214 746.9 473 79.1
AT5G62790 Arabidopsis thaliana HOM05D003618 ORTHO05D004302 1.2e-213 746.5 450 82.0
Zm00001eb126690 Zea mays HOM05D003618 ORTHO05D004302 1.2e-213 746.5 458 81.7
MSTRG.11450 Avicennia marina HOM05D003618 ORTHO05D004302 1.6e-213 746.1 475 78.7
MSTRG.23128 Avicennia marina HOM05D003618 ORTHO05D004302 1.6e-213 746.1 471 79.6
Nn4g22770 Nelumbo nucifera HOM05D003618 ORTHO05D004302 2.1e-213 745.7 474 79.3
Oeu040829.1 Olea europaea HOM05D003618 ORTHO05D004302 2.1e-213 745.7 466 79.8
RcHm_v2.0_Chr7g0193571 Rosa chinensis HOM05D003618 ORTHO05D004302 2.1e-213 745.7 467 79.7
Carub.0008s2351 Capsella rubella HOM05D003618 ORTHO05D004302 2.8e-213 745.3 472 79.4
Manes.06G104700 Manihot esculenta HOM05D003618 ORTHO05D004302 2.8e-213 745.3 469 79.7
GSVIVG01007752001 Vitis vinifera HOM05D003618 ORTHO05D004302 4.7e-213 744.6 422 84.6
BcaB02g09693 Brassica carinata HOM05D003618 ORTHO05D004302 6.2e-213 744.2 450 81.3
SalBow5G0347 Salvia bowleyana HOM05D003618 ORTHO05D004302 6.2e-213 744.2 476 79.4
SalBow5G5681 Salvia bowleyana HOM05D003618 ORTHO05D004302 6.2e-213 744.2 476 79.4
TWI14G0558 Tripterygium wilfordii HOM05D003618 ORTHO05D004302 6.2e-213 744.2 465 79.8
Duzib205G1198 Durio zibethinus HOM05D003618 ORTHO05D004302 8.1e-213 743.8 474 80.0
arahy.Tifrunner.gnm1.ann1.9FL7A6 Arachis hypogaea HOM05D003618 ORTHO05D004302 1.1e-212 743.4 419 86.4
Sp2g25950 Schrenkiella parvula HOM05D003618 ORTHO05D004302 1.4e-212 743.0 450 81.6
Dinv20656 Davidia involucrata HOM05D003618 ORTHO05D004302 1.8e-212 742.7 469 78.7
MD14G1180500 Malus domestica HOM05D003618 ORTHO05D004302 1.8e-212 742.7 461 79.8
PGR083G1520 Punica granatum HOM05D003618 ORTHO05D004302 1.8e-212 742.7 442 83.3
Thhalv10004122m.g Eutrema salsugineum HOM05D003618 ORTHO05D004302 2.4e-212 742.3 434 83.2
MD06G1174000 Malus domestica HOM05D003618 ORTHO05D004302 2.4e-212 742.3 462 79.4
HPP92_004862 Vanilla planifolia HOM05D003618 ORTHO05D004302 2.4e-212 742.3 459 80.6
VMungo1215G2328 Vigna mungo HOM05D003618 ORTHO05D004302 2.4e-212 742.3 440 83.4
PSO170G5081 Papaver somniferum HOM05D003618 ORTHO05D004302 4.0e-212 741.5 421 84.8
Potri.015G076200 Populus trichocarpa HOM05D003618 ORTHO05D004302 4.0e-212 741.5 467 80.5
arahy.Tifrunner.gnm1.ann1.2KV8GB Arachis hypogaea HOM05D003618 ORTHO05D004302 5.2e-212 741.1 462 80.5
PSO455G0039 Papaver somniferum HOM05D003618 ORTHO05D004302 5.2e-212 741.1 424 83.7
Sed0001158 Sechium edule HOM05D003618 ORTHO05D004302 8.9e-212 740.3 442 81.4
TAR622G0131 Trochodendron aralioides HOM05D003618 ORTHO05D004302 8.9e-212 740.3 457 80.5
Aqoxy3G02948 Aquilegia oxysepala HOM05D003618 ORTHO05D004302 1.2e-211 740.0 434 83.2
BraA09t36436Z Brassica rapa HOM05D003618 ORTHO05D004302 2.6e-211 738.8 483 77.0
Migut.I00013 Erythranthe guttata HOM05D003618 ORTHO05D004302 3.4e-211 738.4 476 78.8
Sabra15G0101400 Salix brachista HOM05D003618 ORTHO05D004302 3.4e-211 738.4 467 79.7
Hund02742 Selenicereus undatus HOM05D003618 ORTHO05D004302 3.4e-211 738.4 444 81.5
MELO3C026292.2 Cucumis melo HOM05D003618 ORTHO05D004302 4.4e-211 738.0 460 79.6
HanXRQChr05g0153451 Helianthus annuus HOM05D003618 ORTHO05D004302 4.4e-211 738.0 425 83.3
Lsat_1_v5_gn_4_75261 Lactuca sativa HOM05D003618 ORTHO05D004302 4.4e-211 738.0 465 78.5
Phvul.003G200300 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 4.4e-211 738.0 439 82.9
Rhsim08G0171900 Rhododendron simsii HOM05D003618 ORTHO05D004302 4.4e-211 738.0 496 75.4
ClCG06G017010 Citrullus lanatus HOM05D003618 ORTHO05D004302 7.6e-211 737.3 418 84.9
Lj5A124T67 Lonicera japonica HOM05D003618 ORTHO05D004302 7.6e-211 737.3 415 86.5
Lj4g0012807 Lotus japonicus HOM05D003618 ORTHO05D004302 9.9e-211 736.9 461 79.2
ATR0730G147 Amborella trichopoda HOM05D003618 ORTHO05D004302 1.3e-210 736.5 459 80.4
Thecc.03G012400 Theobroma cacao HOM05D003618 ORTHO05D004302 1.3e-210 736.5 469 79.1
A06p29560 Brassica napus HOM05D003618 ORTHO05D004302 1.7e-210 736.1 451 80.7
vmacro19385 Vaccinium macrocarpon HOM05D003618 ORTHO05D004302 1.7e-210 736.1 452 81.2
Sed0011107 Sechium edule HOM05D003618 ORTHO05D004302 2.2e-210 735.7 421 83.6
CsaV3_1G001500 Cucumis sativus L. HOM05D003618 ORTHO05D004302 2.9e-210 735.3 460 79.3
Ca_21917_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 6.4e-210 734.2 449 81.3
Glyma.17G089600 Glycine max HOM05D003618 ORTHO05D004302 1.1e-209 733.4 439 82.5
FAN04G2056 Fragaria x ananassa HOM05D003618 ORTHO05D004302 1.9e-209 732.6 509 73.5
TPR.G37486 Trifolium pratense HOM05D003618 ORTHO05D004302 2.4e-209 732.3 444 81.1
ECA232G0993 Erigeron canadensis HOM05D003618 ORTHO05D004302 3.2e-209 731.9 464 78.9
Medtr4g106870 Medicago truncatula HOM05D003618 ORTHO05D004302 3.2e-209 731.9 441 81.4
Prupe.5G174000 Prunus persica HOM05D003618 ORTHO05D004302 3.2e-209 731.9 469 77.6
CDE07G0194 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 1.2e-208 729.9 457 78.3
Lalb_Chr13g0297811 Lupinus albus HOM05D003618 ORTHO05D004302 2.7e-208 728.8 470 78.1
unitig_0.g1445 Utricularia gibba HOM05D003618 ORTHO05D004302 2.7e-208 728.8 449 80.4
Gorai.007G001700 Gossypium raimondii HOM05D003618 ORTHO05D004302 3.5e-208 728.4 469 78.0
Lj9A449G48 Lonicera japonica HOM05D003618 ORTHO05D004302 3.5e-208 728.4 518 72.6
THA.LOC104818235 Tarenaya hassleriana HOM05D003618 ORTHO05D004302 6.0e-208 727.6 420 84.0
FAN13G0153 Fragaria x ananassa HOM05D003618 ORTHO05D004302 1.7e-207 726.1 509 72.9
CANSAT80G1130 Cannabis sativa HOM05D003618 ORTHO05D004302 3.0e-207 725.3 424 81.8
FAN18G3061 Fragaria x ananassa HOM05D003618 ORTHO05D004302 3.0e-207 725.3 509 72.7
BcaC01g02522 Brassica carinata HOM05D003618 ORTHO05D004302 3.9e-207 724.9 408 86.0
C03p63940 Brassica napus HOM05D003618 ORTHO05D004302 3.9e-207 724.9 408 86.0
BolC3t18648H Brassica oleracea HOM05D003618 ORTHO05D004302 3.9e-207 724.9 408 86.0
FAN08G0480 Fragaria x ananassa HOM05D003618 ORTHO05D004302 3.9e-207 724.9 509 73.1
Gohir.A11G001200 Gossypium hirsutum HOM05D003618 ORTHO05D004302 3.9e-207 724.9 465 78.5
Atru.chr9.2476 Acer truncatum HOM05D003618 ORTHO05D004302 2.5e-206 722.2 418 83.5
Ciclev10020004m.g Citrus clementina HOM05D003618 ORTHO05D004302 5.6e-206 721.1 462 76.6
Lalb_Chr07g0182731 Lupinus albus HOM05D003618 ORTHO05D004302 9.6e-206 720.3 466 77.9
BraA06t25902Z Brassica rapa HOM05D003618 ORTHO05D004302 1.3e-205 719.9 471 76.9
Psat4g058000 Pisum sativum HOM05D003618 ORTHO05D004302 1.3e-205 719.9 441 81.4
Lalb_Chr12g0201571 Lupinus albus HOM05D003618 ORTHO05D004302 2.8e-205 718.8 463 76.7
MBI16_g32207_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 4.0e-204 714.9 459 78.6
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.5e-203 713.0 467 75.8
Migut.I00014 Erythranthe guttata HOM05D003618 ORTHO05D004302 2.0e-203 712.6 475 76.6
MBI10_g14554_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 1.7e-202 709.5 465 76.8
AUR62030965 Chenopodium quinoa HOM05D003618 ORTHO05D004302 2.9e-202 708.8 446 77.8
PGSC0003DMG400024503 Solanum tuberosum HOM05D003618 ORTHO05D004302 9.3e-201 703.7 489 75.5
CANSAT80G1364 Cannabis sativa HOM05D003618 ORTHO05D004302 1.2e-200 703.4 425 79.3
Aa31LG11G890 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.6e-200 703.0 448 77.9
Mapoly0034s0078 Marchantia polymorpha HOM05D003618 ORTHO05D004302 2.1e-200 702.6 466 74.9
AUR62008212 Chenopodium quinoa HOM05D003618 ORTHO05D004302 1.0e-199 700.3 427 79.6
Mapoly0064s0074 Marchantia polymorpha HOM05D003618 ORTHO05D004302 1.5e-198 696.4 416 78.6
arahy.Tifrunner.gnm1.ann1.NJJ8BU Arachis hypogaea HOM05D003618 ORTHO05D004302 3.7e-197 691.8 412 78.6
Aa31LG11G900 Aethionema arabicum HOM05D003618 ORTHO05D004302 4.8e-197 691.4 434 77.6
arahy.Tifrunner.gnm1.ann1.5ZTX8H Arachis hypogaea HOM05D003618 ORTHO05D004302 6.2e-197 691.0 412 78.6
Lalb_Chr12g0209981 Lupinus albus HOM05D003618 ORTHO05D004302 3.1e-196 688.7 414 79.0
Hund09436 Selenicereus undatus HOM05D003618 ORTHO05D004302 5.8e-195 684.5 444 72.1
SMO348G0015 Selaginella moellendorffii HOM05D003618 ORTHO05D004302 1.3e-194 683.3 463 72.4
MBI10_g41914_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 4.2e-193 678.3 458 75.3
Pp3c8_12290 Physcomitrium patens HOM05D003618 ORTHO05D004302 5.5e-193 677.9 451 75.4
Cpa.g.sc76.64 Carica papaya HOM05D003618 ORTHO05D004302 1.2e-192 676.8 379 87.6
Pp3c24_8730 Physcomitrium patens HOM05D003618 ORTHO05D004302 2.1e-192 676.0 458 73.8
Ciclev10019836m.g Citrus clementina HOM05D003618 ORTHO05D004302 7.9e-192 674.1 431 75.4
Glyma.16G089000 Glycine max HOM05D003618 ORTHO05D004302 1.8e-191 672.9 426 75.4
Duzib068G0560 Durio zibethinus HOM05D003618 ORTHO05D004302 3.0e-191 672.2 376 86.7
Phvul.010G023000 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 3.0e-191 672.2 426 75.1
TPR.G31563 Trifolium pratense HOM05D003618 ORTHO05D004302 4.3e-190 668.3 466 71.2
VMungo0331G0859 Vigna mungo HOM05D003618 ORTHO05D004302 1.6e-189 666.4 443 72.9
Lj3g0025861 Lotus japonicus HOM05D003618 ORTHO05D004302 6.2e-189 664.5 463 70.8
Ca_23215_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 8.2e-189 664.1 415 77.1
SGA_v2.0_scaffold25G10843 Striga asiatica HOM05D003618 ORTHO05D004302 1.9e-185 652.9 442 74.9
Medtr8g012565 Medicago truncatula HOM05D003618 ORTHO05D004302 2.5e-185 652.5 464 70.0
CBR_g11924 Chara braunii HOM05D003618 ORTHO05D004302 7.6e-179 630.9 407 74.7
HanXRQChr16g0517311 Helianthus annuus HOM05D003618 ORTHO05D004302 2.7e-176 622.5 441 69.2
CDE06G1773 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 2.3e-175 619.4 460 70.0
Cre12.g546050 Chlamydomonas reinhardtii HOM05D003618 ORTHO05D004302 2.5e-169 599.4 405 71.9
CAN.G781.11 Capsicum annuum HOM05D003618 ORTHO05D004302 7.2e-169 597.8 327 90.2
Aa31sc1732G20 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.4e-167 593.6 399 74.4
Dinv02897 Davidia involucrata HOM05D003618 ORTHO05D004302 4.8e-165 585.1 370 78.1
HanXRQChr05g0156211 Helianthus annuus HOM05D003618 ORTHO05D004302 6.9e-164 581.3 331 85.8
Aa31sc1732G10 Aethionema arabicum HOM05D003618 ORTHO05D004302 6.5e-162 574.7 329 85.1
PRCOL_00002139 Prasinoderma coloniale HOM05D003618 ORTHO05D004302 5.9e-155 551.6 416 65.9
Sabra12G0057700 Salix brachista HOM05D003618 ORTHO05D004302 3.0e-151 539.3 413 70.2
Cc00_g09910 Coffea canephora HOM05D003618 ORTHO05D004302 8.3e-141 504.6 306 81.7
MCO15G646 Micromonas commoda HOM05D003618 ORTHO05D004302 1.9e-137 493.4 364 64.8
AagrBONN_evm.TU.Sc2ySwM_228.1199 Anthoceros agrestis HOM05D003618 ORTHO05D004302 2.0e-131 473.4 328 73.2
Sc12g0005340 Simmondsia chinensis HOM05D003618 ORTHO05D004302 4.6e-115 419.1 286 74.5
Psat4g204400 Pisum sativum HOM05D003618 ORTHO05D004302 9.9e-102 374.8 293 65.9
Actinidia33067 Actinidia chinensis HOM05D003618 ORTHO05D004302 9.6e-97 358.2 257 73.5
Zm00001eb334380 Zea mays HOM05D003618 ORTHO05D004302 6.9e-95 352.1 188 88.8
Gohir.D11G000766 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.2e-91 341.3 188 86.2
Sc12g0005330 Simmondsia chinensis HOM05D003618 ORTHO05D004302 1.2e-83 314.7 177 82.5
FvH4_4g01210 Fragaria vesca HOM05D003618 ORTHO05D004302 1.6e-80 304.3 263 64.6
Zm00001eb334370 Zea mays HOM05D003618 ORTHO05D004302 1.3e-77 294.7 221 71.0
Gohir.D11G000832 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.3e-72 278.1 223 67.3
Cc04_g14070 Coffea canephora HOM05D003618 ORTHO05D004302 3.5e-67 260.0 223 63.2
VMungo0647G0692 Vigna mungo HOM05D003618 ORTHO05D004302 3.1e-63 246.9 158 81.0
Hund09437 Selenicereus undatus HOM05D003618 ORTHO05D004302 3.8e-61 240.0 397 41.3
Lsat_1_v5_gn_0_46101 Lactuca sativa HOM05D003618 ORTHO05D004302 2.7e-59 233.8 353 38.5
FvH4_3g27741 Fragaria vesca HOM05D003618 ORTHO05D004302 4.1e-55 219.9 147 78.2
FvH4_1g09716 Fragaria vesca HOM05D003618 ORTHO05D004302 5.0e-45 186.4 155 65.8
FvH4_1g09717 Fragaria vesca HOM05D003618 ORTHO05D004302 5.7e-33 146.4 71 100.0
DCAR_016639 Daucus carota HOM05D003618 ORTHO05D003669 6.5e-29 132.9 75 86.7
FAN09G3822 Fragaria x ananassa HOM05D003618 ORTHO05D004302 2.7e-22 110.9 113 51.3
RcHm_v2.0_Chr1g0360281 Rosa chinensis HOM05D003618 ORTHO05D004302 2.5e-20 104.4 72 73.6
RcHm_v2.0_Chr2g0151191 Rosa chinensis HOM05D001812 ORTHO05D004302 7.2e-20 102.8 73 72.6
Cc00_g21160 Coffea canephora HOM05D003618 ORTHO05D153345 3.5e-14 84.0 47 80.9
Hma1.2p1_0549F.1_g176800 Hydrangea macrophylla HOM05D003618 ORTHO05D004302 7.8e-14 82.8 49 85.7
Cc00_g09880 Coffea canephora HOM05D003618 ORTHO05D004302 8.6e-13 79.3 37 97.3
SGA_v2.0_scaffold45G17201 Striga asiatica HOM05D003618 ORTHO05D404764 7.3e-12 76.3 147 41.5


User provided reference genes

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