Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37104 Sequoiadendron giganteum HOM05D006064 ORTHO05D007619 6.5e-82 307.4 159 100.0
Glyma.13G357200 Glycine max HOM05D006064 ORTHO05D007619 8.4e-29 131.0 120 61.7
Glyma.15G016400 Glycine max HOM05D006064 ORTHO05D007619 1.4e-28 130.2 122 60.7
Phvul.005G168800 Phaseolus vulgaris HOM05D006064 ORTHO05D007619 1.9e-28 129.8 122 59.0
Sed0002776 Sechium edule HOM05D006064 ORTHO05D007619 3.2e-28 129.0 149 49.7
Lj5C58T14 Lonicera japonica HOM05D006064 ORTHO05D007619 4.1e-28 128.6 103 65.0
Hma1.2p1_1195F.1_g265790 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 5.4e-28 128.3 122 57.4
Hma1.2p1_3147F.1_g333156 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 5.4e-28 128.3 122 57.4
Aqoxy7G01608 Aquilegia oxysepala HOM05D006064 ORTHO05D007619 7.1e-28 127.9 149 47.7
Duzib235G0379 Durio zibethinus HOM05D006064 ORTHO05D007619 9.2e-28 127.5 122 55.7
Thhalv10001197m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 1.2e-27 127.1 131 56.5
GSVIVG01017072001 Vitis vinifera HOM05D006064 ORTHO05D007619 1.6e-27 126.7 125 57.6
Ah.01g021630 Amaranthus hybridus HOM05D006064 ORTHO05D007619 3.5e-27 125.6 132 53.8
CsaV3_7G033420 Cucumis sativus L. HOM05D006064 ORTHO05D007619 7.8e-27 124.4 136 52.9
Lalb_Chr22g0351371 Lupinus albus HOM05D006064 ORTHO05D007619 7.8e-27 124.4 160 49.4
MBI09_g14014_MAGBIO Magnolia biondii HOM05D006064 ORTHO05D007619 7.8e-27 124.4 131 58.0
Cfa002095 Carpinus fangiana HOM05D006064 ORTHO05D007619 1.3e-26 123.6 136 55.1
CDE04G2099 Ceratophyllum demersum HOM05D006064 ORTHO05D007619 1.3e-26 123.6 135 54.1
DCAR_016211 Daucus carota HOM05D006064 ORTHO05D007619 1.3e-26 123.6 96 64.6
Potri.001G184000 Populus trichocarpa HOM05D006064 ORTHO05D007619 1.3e-26 123.6 158 49.4
SGA_v2.0_scaffold69G23360 Striga asiatica HOM05D006064 ORTHO05D007619 1.3e-26 123.6 135 51.9
Haze_16361 Corylus avellana HOM05D006064 ORTHO05D007619 1.7e-26 123.2 124 57.3
ClCG09G001940 Citrullus lanatus HOM05D006064 ORTHO05D007619 2.3e-26 122.9 137 51.8
MELO3C024255.2 Cucumis melo HOM05D006064 ORTHO05D007619 2.3e-26 122.9 136 51.5
CiPaw.02G148800 Carya illinoinensis HOM05D006064 ORTHO05D007619 3.0e-26 122.5 124 54.8
PSO782G0135 Papaver somniferum HOM05D006064 ORTHO05D007619 3.0e-26 122.5 132 52.3
Sabra01G0155400 Salix brachista HOM05D006064 ORTHO05D007619 3.0e-26 122.5 156 49.4
Solyc03g120630.4 Solanum lycopersicum HOM05D006064 ORTHO05D007619 3.0e-26 122.5 122 57.4
CSS0016455 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 3.9e-26 122.1 122 56.6
Gohir.A05G131800 Gossypium hirsutum HOM05D006064 ORTHO05D007619 3.9e-26 122.1 145 51.0
Lj3g0008796 Lotus japonicus HOM05D006064 ORTHO05D007619 3.9e-26 122.1 118 58.5
PSO566G0311 Papaver somniferum HOM05D006064 ORTHO05D007619 3.9e-26 122.1 132 52.3
TAR626G0023 Trochodendron aralioides HOM05D006064 ORTHO05D007619 3.9e-26 122.1 134 52.2
Duzib160G0510 Durio zibethinus HOM05D006064 ORTHO05D007619 5.1e-26 121.7 133 54.1
RcHm_v2.0_Chr2g0138941 Rosa chinensis HOM05D006064 ORTHO05D007619 5.1e-26 121.7 136 52.2
PGSC0003DMG400002547 Solanum tuberosum HOM05D006064 ORTHO05D007619 5.1e-26 121.7 122 57.4
TAR383G1034 Trochodendron aralioides HOM05D006064 ORTHO05D007619 5.1e-26 121.7 148 48.6
Thecc.06G092400 Theobroma cacao HOM05D006064 ORTHO05D007619 6.6e-26 121.3 145 51.0
CANSAT56G1509 Cannabis sativa HOM05D006064 ORTHO05D007619 8.6e-26 120.9 148 47.3
C09p30100 Brassica napus HOM05D006064 ORTHO05D007619 1.1e-25 120.6 131 55.0
Gohir.D05G131300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.1e-25 120.6 133 52.6
Gohir.D10G070100 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.1e-25 120.6 128 53.9
Gorai.009G135000 Gossypium raimondii HOM05D006064 ORTHO05D007619 1.1e-25 120.6 133 52.6
Carub.0002s2765 Capsella rubella HOM05D006064 ORTHO05D007619 1.5e-25 120.2 143 52.4
Sp2g12850 Schrenkiella parvula HOM05D006064 ORTHO05D007619 1.5e-25 120.2 140 53.6
Actinidia21680 Actinidia chinensis HOM05D006064 ORTHO05D007619 1.9e-25 119.8 145 51.0
Gorai.011G074400 Gossypium raimondii HOM05D006064 ORTHO05D007619 1.9e-25 119.8 145 50.3
CSS0001890 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 2.5e-25 119.4 122 55.7
Dinv38021 Davidia involucrata HOM05D006064 ORTHO05D007619 2.5e-25 119.4 122 54.1
QL05p021654 Quercus lobata HOM05D006064 ORTHO05D007619 2.5e-25 119.4 147 48.3
AL2G41710 Arabidopsis lyrata HOM05D006064 ORTHO05D007619 3.3e-25 119.0 147 51.7
CAN.G438.28 Capsicum annuum HOM05D006064 ORTHO05D007619 4.3e-25 118.6 118 56.8
Rhsim08G0223400 Rhododendron simsii HOM05D006064 ORTHO05D007619 4.3e-25 118.6 104 58.7
BcaC04g21590 Brassica carinata HOM05D006064 ORTHO05D007619 5.6e-25 118.2 131 54.2
BolC9t55874H Brassica oleracea HOM05D006064 ORTHO05D007619 5.6e-25 118.2 131 54.2
FvH4_6g31770 Fragaria vesca HOM05D006064 ORTHO05D007619 5.6e-25 118.2 145 49.7
Nitab4.5_0007217g0010 Nicotiana tabacum HOM05D006064 ORTHO05D007619 5.6e-25 118.2 93 65.6
Cpa.g.sc98.5 Carica papaya HOM05D006064 ORTHO05D007619 7.3e-25 117.9 111 57.7
Medtr2g101770 Medicago truncatula HOM05D006064 ORTHO05D007619 7.3e-25 117.9 123 56.1
BcaB07g30746 Brassica carinata HOM05D006064 ORTHO05D007619 9.6e-25 117.5 124 54.8
FAN05G4262 Fragaria x ananassa HOM05D006064 ORTHO05D007619 9.6e-25 117.5 150 48.0
FAN09G1878 Fragaria x ananassa HOM05D006064 ORTHO05D007619 9.6e-25 117.5 144 50.0
Prupe.3G067300 Prunus persica HOM05D006064 ORTHO05D007619 9.6e-25 117.5 137 52.6
VMungo1080G0744 Vigna mungo HOM05D006064 ORTHO05D007619 9.6e-25 117.5 118 55.9
ATR0693G299 Amborella trichopoda HOM05D006064 ORTHO05D007619 1.2e-24 117.1 118 55.9
AT1G79850 Arabidopsis thaliana HOM05D006064 ORTHO05D007619 1.2e-24 117.1 147 52.4
BcaC04g21589 Brassica carinata HOM05D006064 ORTHO05D007619 1.2e-24 117.1 120 56.7
Aa31LG4G130 Aethionema arabicum HOM05D006064 ORTHO05D007619 1.6e-24 116.7 147 51.7
BolC9t55875H Brassica oleracea HOM05D006064 ORTHO05D007619 1.6e-24 116.7 120 56.7
Cc04_g03040 Coffea canephora HOM05D006064 ORTHO05D007619 1.6e-24 116.7 133 55.6
COL.COLO4_30435 Corchorus olitorius HOM05D006064 ORTHO05D007619 1.6e-24 116.7 93 63.4
TWI75G0440 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 1.6e-24 116.7 147 52.4
Ah.01g005550 Amaranthus hybridus HOM05D006064 ORTHO05D007619 2.1e-24 116.3 126 54.8
A09p23360 Brassica napus HOM05D006064 ORTHO05D007619 2.1e-24 116.3 120 56.7
BraA09t37937Z Brassica rapa HOM05D006064 ORTHO05D007619 2.1e-24 116.3 120 56.7
A09p23350 Brassica napus HOM05D006064 ORTHO05D007619 2.8e-24 115.9 120 56.7
BraA09t37936Z Brassica rapa HOM05D006064 ORTHO05D007619 2.8e-24 115.9 120 56.7
Thhalv10019289m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 2.8e-24 115.9 133 52.6
FAN02G0676 Fragaria x ananassa HOM05D006064 ORTHO05D007619 2.8e-24 115.9 145 49.7
HanXRQChr12g0360791 Helianthus annuus HOM05D006064 ORTHO05D007619 2.8e-24 115.9 137 48.2
Lsat_1_v5_gn_5_130940 Lactuca sativa HOM05D006064 ORTHO05D007619 2.8e-24 115.9 142 46.5
Manes.04G130000 Manihot esculenta HOM05D006064 ORTHO05D007619 2.8e-24 115.9 157 45.2
CARHR074660 Cardamine hirsuta HOM05D006064 ORTHO05D007619 3.6e-24 115.5 145 49.7
FAN14G0180 Fragaria x ananassa HOM05D006064 ORTHO05D007619 3.6e-24 115.5 145 49.0
AagrBONN_evm.TU.Sc2ySwM_344.4095 Anthoceros agrestis HOM05D006064 ORTHO05D007619 4.7e-24 115.2 132 50.0
C09p30110 Brassica napus HOM05D006064 ORTHO05D007619 4.7e-24 115.2 120 55.8
Eucgr.F03039 Eucalyptus grandis HOM05D006064 ORTHO05D007619 4.7e-24 115.2 126 51.6
Nitab4.5_0001315g0190 Nicotiana tabacum HOM05D006064 ORTHO05D007619 4.7e-24 115.2 93 63.4
TPR.G37258 Trifolium pratense HOM05D006064 ORTHO05D007619 4.7e-24 115.2 123 52.8
Ca_01132_v3 Cicer arietinum L. HOM05D006064 ORTHO05D007619 6.2e-24 114.8 147 47.6
Ciclev10026679m.g Citrus clementina HOM05D006064 ORTHO05D007619 6.2e-24 114.8 148 46.6
Nn2g11694 Nelumbo nucifera HOM05D006064 ORTHO05D007619 6.2e-24 114.8 97 60.8
SGA_v2.0_scaffold5G02555 Striga asiatica HOM05D006064 ORTHO05D007619 6.2e-24 114.8 111 57.7
vmacro18887 Vaccinium macrocarpon HOM05D006064 ORTHO05D007619 6.2e-24 114.8 97 59.8
arahy.Tifrunner.gnm1.ann1.MEX591 Arachis hypogaea HOM05D006064 ORTHO05D007619 8.1e-24 114.4 109 57.8
Os04g0691600 Oryza sativa ssp. japonica HOM05D006064 ORTHO05D007619 8.1e-24 114.4 102 61.8
PGR102G3343 Punica granatum HOM05D006064 ORTHO05D007619 8.1e-24 114.4 124 53.2
Sc12g0009460 Simmondsia chinensis HOM05D006064 ORTHO05D007619 8.1e-24 114.4 104 57.7
AagrBONN_evm.TU.Sc2ySwM_344.4090 Anthoceros agrestis HOM05D006064 ORTHO05D007619 1.1e-23 114.0 132 50.0
EL10Ac9g22030 Beta vulgaris HOM05D006064 ORTHO05D007619 1.1e-23 114.0 94 64.9
AUR62011660 Chenopodium quinoa HOM05D006064 ORTHO05D007619 1.1e-23 114.0 130 53.1
AUR62016483 Chenopodium quinoa HOM05D006064 ORTHO05D007619 1.1e-23 114.0 146 47.3
Gohir.A10G081300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.1e-23 114.0 94 61.7
TWI12G0791 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 1.4e-23 113.6 147 49.0
CSS0048088 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 3.1e-23 112.5 96 61.5
MD17G1191100 Malus domestica HOM05D006064 ORTHO05D007619 3.1e-23 112.5 136 51.5
Zm00001eb367450 Zea mays HOM05D006064 ORTHO05D007619 6.8e-23 111.3 117 54.7
THA.LOC104800422 Tarenaya hassleriana HOM05D006064 ORTHO05D007619 8.9e-23 110.9 136 52.9
unitig_37.g12253 Utricularia gibba HOM05D000346 ORTHO05D000326 3.4e-22 109.0 129 48.8
MSTRG.11053 Avicennia marina HOM05D006064 ORTHO05D007619 4.4e-22 108.6 151 47.0
unitig_46.g18557 Utricularia gibba HOM05D006064 ORTHO05D007619 7.6e-22 107.8 107 56.1
SalBow2G0408 Salvia bowleyana HOM05D006064 ORTHO05D007619 1.7e-21 106.7 97 57.7
Migut.I00941 Erythranthe guttata HOM05D006064 ORTHO05D007619 1.4e-20 103.6 115 53.0
Zm00001eb434460 Zea mays HOM05D006064 ORTHO05D007619 1.9e-20 103.2 117 52.1
Oeu033507.1 Olea europaea HOM05D006064 ORTHO05D007619 7.1e-20 101.3 142 45.1
Nn3g18074 Nelumbo nucifera HOM05D006064 ORTHO05D007619 6.0e-19 98.2 95 58.9
CSS0034695 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 1.1e-17 94.0 96 55.2
Pp3c1_12860 Physcomitrium patens HOM05D006064 ORTHO05D007619 1.1e-15 87.4 120 41.7
Pp3c11_14630 Physcomitrium patens HOM05D006064 ORTHO05D007619 1.8e-15 86.7 119 42.0
Mapoly0027s0119 Marchantia polymorpha HOM05D006064 ORTHO05D007619 2.4e-15 86.3 131 44.3
SMO358G0237 Selaginella moellendorffii HOM05D006064 ORTHO05D007619 3.8e-13 79.0 70 60.0
CBR_g33913 Chara braunii HOM05D006064 ORTHO05D007619 4.9e-13 78.6 146 37.7
MD09G1209400 Malus domestica HOM05D006064 ORTHO05D007619 1.9e-12 76.6 89 52.8
Actinidia32730 Actinidia chinensis HOM05D006064 ORTHO05D007619 2.7e-11 72.8 96 46.9
Peaxi162Scf00015g00005 Petunia axillaris HOM05D006064 ORTHO05D007619 2.7e-11 72.8 61 60.7
Actinidia13476 Actinidia chinensis HOM05D006064 ORTHO05D007619 1.3e-10 70.5 71 52.1
Haze_02816 Corylus avellana HOM05D002629 ORTHO05D003221 2.4e-07 59.7 45 60.0
MCO03G166 Micromonas commoda HOM05D006064 ORTHO05D007619 3.1e-07 59.3 79 41.8
Cre02.g118950 Chlamydomonas reinhardtii HOM05D004588 ORTHO05D005365 5.3e-07 58.5 73 47.9
SalBow1G4549 Salvia bowleyana HOM05D006064 ORTHO05D007619 2.6e-06 56.2 75 44.0
Actinidia35657 Actinidia chinensis HOM05D006064 ORTHO05D007619 4.5e-06 55.5 93 37.6
Pp3c1_39230 Physcomitrium patens HOM05D004588 ORTHO05D005365 9.9e-06 54.3 66 43.9


User provided reference genes

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