Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 7.1e-124 447.2 215 100.0
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 7.8e-46 188.0 120 71.7
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 1.7e-45 186.8 119 73.1
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 6.6e-45 184.9 119 69.7
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 8.6e-45 184.5 119 72.3
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 8.6e-45 184.5 119 69.7
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.1e-44 184.1 156 59.6
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 1.5e-44 183.7 119 70.6
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 1.9e-44 183.3 119 71.4
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 1.9e-44 183.3 119 69.7
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.5e-44 183.0 119 70.6
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.5e-44 183.0 119 70.6
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 3.3e-44 182.6 114 71.1
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 3.3e-44 182.6 114 71.1
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 3.3e-44 182.6 119 71.4
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.3e-44 182.6 119 69.7
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 3.3e-44 182.6 119 69.7
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 3.3e-44 182.6 119 68.9
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 4.3e-44 182.2 117 72.6
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 4.3e-44 182.2 133 65.4
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 5.6e-44 181.8 119 72.3
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 5.6e-44 181.8 119 68.9
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 5.6e-44 181.8 117 71.8
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 7.3e-44 181.4 119 69.7
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 7.3e-44 181.4 119 69.7
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 7.3e-44 181.4 119 69.7
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 7.3e-44 181.4 119 69.7
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 9.5e-44 181.0 117 70.1
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 9.5e-44 181.0 117 70.1
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 9.5e-44 181.0 117 70.1
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 9.5e-44 181.0 117 70.9
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 1.2e-43 180.6 119 70.6
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 1.2e-43 180.6 119 69.7
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.2e-43 180.6 119 68.9
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.6e-43 180.3 141 61.7
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 2.1e-43 179.9 133 64.7
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 2.1e-43 179.9 119 70.6
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 2.8e-43 179.5 119 68.9
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 2.8e-43 179.5 119 70.6
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 2.8e-43 179.5 119 69.7
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 3.6e-43 179.1 119 68.9
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 3.6e-43 179.1 119 71.4
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 4.7e-43 178.7 119 68.9
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 6.2e-43 178.3 117 70.9
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 6.2e-43 178.3 119 69.7
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 6.2e-43 178.3 119 67.2
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 6.2e-43 178.3 119 66.4
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 8.1e-43 177.9 119 67.2
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 8.1e-43 177.9 119 70.6
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-42 177.6 119 69.7
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 1.1e-42 177.6 119 69.7
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 1.1e-42 177.6 119 68.1
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.1e-42 177.6 119 68.9
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 1.4e-42 177.2 117 70.1
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 1.4e-42 177.2 117 69.2
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 1.4e-42 177.2 119 69.7
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 1.8e-42 176.8 119 68.9
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 2.3e-42 176.4 119 68.9
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 2.3e-42 176.4 121 65.3
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 2.3e-42 176.4 122 68.9
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 4.0e-42 175.6 119 68.1
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 4.0e-42 175.6 119 68.9
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 4.0e-42 175.6 119 65.5
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 4.0e-42 175.6 119 65.5
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 5.2e-42 175.3 117 69.2
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 8.9e-42 174.5 113 69.9
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 8.9e-42 174.5 114 69.3
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.2e-41 174.1 119 64.7
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.2e-41 174.1 119 67.2
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 1.2e-41 174.1 119 67.2
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 1.5e-41 173.7 119 67.2
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.5e-41 173.7 119 68.1
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 2.6e-41 172.9 119 67.2
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 2.6e-41 172.9 119 67.2
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 3.4e-41 172.6 119 69.7
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 3.4e-41 172.6 119 68.1
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 4.4e-41 172.2 119 66.4
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 4.4e-41 172.2 119 66.4
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 4.4e-41 172.2 117 65.0
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 5.8e-41 171.8 119 67.2
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 7.5e-41 171.4 119 65.5
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 7.5e-41 171.4 113 66.4
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 7.5e-41 171.4 113 66.4
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 9.8e-41 171.0 113 68.1
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 1.3e-40 170.6 117 65.8
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.7e-40 170.2 117 67.5
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 3.7e-40 169.1 119 67.2
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 4.9e-40 168.7 117 67.5
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 6.4e-40 168.3 119 65.5
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 6.4e-40 168.3 133 59.4
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 6.4e-40 168.3 112 70.5
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 8.3e-40 167.9 117 67.5
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 8.3e-40 167.9 129 63.6
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 1.4e-39 167.2 119 62.2
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 2.4e-39 166.4 134 60.4
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.1e-39 165.6 117 67.5
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 5.4e-39 165.2 120 64.2
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 5.4e-39 165.2 119 63.9
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 7.1e-39 164.9 115 67.8
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 1.2e-38 164.1 119 63.9
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 2.1e-38 163.3 120 62.5
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 4.6e-38 162.2 119 66.4
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 4.6e-38 162.2 120 62.5
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 6.6e-37 158.3 118 62.7
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 6.6e-37 158.3 119 62.2
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 8.1e-35 151.4 120 60.8
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.5e-33 147.1 90 71.1
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 1.5e-33 147.1 96 70.8
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 2.2e-32 143.3 125 56.8
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 3.3e-28 129.4 216 38.4
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 8.1e-27 124.8 116 53.4
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 3.2e-23 112.8 131 47.3
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 1.5e-20 104.0 142 41.5
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 4.3e-20 102.4 119 45.4
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 6.2e-19 98.6 140 41.4
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 3.1e-18 96.3 68 63.2
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-17 93.6 82 51.2
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 1.3e-16 90.9 85 49.4
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 2.2e-16 90.1 62 61.3
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 5.4e-15 85.5 83 47.0
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 6.0e-14 82.0 62 53.2
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 2.3e-13 80.1 78 51.3
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 5.1e-13 79.0 54 59.3
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 1.1e-12 77.8 54 68.5
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 7.6e-09 65.1 36 80.6
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 9.9e-09 64.7 48 58.3
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 1.3e-08 64.3 34 82.4
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 5.5e-07 58.9 62 45.2
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 9.3e-07 58.2 36 69.4
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 6.0e-06 55.5 74 39.2


User provided reference genes

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