Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35821 Sequoiadendron giganteum HOM05D000306 ORTHO05D005993 1.8e-306 1055.0 507 100.0
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 1.3e-160 570.5 495 57.2
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 5.5e-159 565.1 471 58.6
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 2.6e-156 556.2 499 56.7
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 1.1e-154 550.8 465 59.6
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 1.4e-154 550.4 478 57.3
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 9.1e-154 547.7 470 58.1
Hma1.2p1_1423F.1_g282650 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.5e-151 540.4 481 56.1
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 1.9e-151 540.0 467 58.0
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 3.2e-151 539.3 467 55.5
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 4.2e-151 538.9 476 56.3
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 4.2e-151 538.9 471 58.6
Cc06_g13480 Coffea canephora HOM05D000306 ORTHO05D005993 5.5e-151 538.5 473 58.4
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 7.2e-151 538.1 463 57.5
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 9.4e-151 537.7 478 55.9
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 1.2e-150 537.3 463 56.4
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 2.1e-150 536.6 474 56.5
Haze_22119 Corylus avellana HOM05D000306 ORTHO05D005993 6.1e-150 535.0 467 55.9
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 1.0e-149 534.3 470 56.0
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 1.0e-149 534.3 468 57.5
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 2.3e-149 533.1 472 57.0
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 3.0e-149 532.7 465 57.0
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 8.8e-149 531.2 462 57.4
Nitab4.5_0000937g0040 Nicotiana tabacum HOM05D000306 ORTHO05D005993 2.6e-148 529.6 469 55.9
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 4.4e-148 528.9 513 52.2
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 2.2e-147 526.6 466 56.4
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 8.3e-147 524.6 466 56.2
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 1.8e-146 523.5 456 57.0
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 3.1e-146 522.7 467 55.5
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 4.1e-146 522.3 463 55.1
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 4.1e-146 522.3 476 54.8
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 7.0e-146 521.5 478 55.0
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 7.0e-146 521.5 467 55.5
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 9.1e-146 521.2 484 55.6
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 2.0e-145 520.0 485 55.3
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 5.9e-145 518.5 479 54.7
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 7.7e-145 518.1 507 51.7
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 2.9e-144 516.2 468 54.9
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 3.8e-144 515.8 504 52.6
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 2.5e-143 513.1 477 53.5
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 3.3e-143 512.7 463 53.6
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 5.5e-143 511.9 468 56.0
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 5.5e-143 511.9 465 55.7
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 9.5e-143 511.1 463 53.8
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 1.2e-142 510.8 459 56.4
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 1.2e-142 510.8 478 54.0
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 1.6e-142 510.4 464 55.0
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 1.6e-142 510.4 473 55.2
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 2.1e-142 510.0 464 55.4
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 3.6e-142 509.2 468 55.8
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 4.7e-142 508.8 477 54.7
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 6.1e-142 508.4 470 54.5
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 6.1e-142 508.4 515 52.6
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 1.0e-141 507.7 465 55.3
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 1.0e-141 507.7 466 54.7
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 1.4e-141 507.3 467 53.5
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 1.4e-141 507.3 471 53.9
Hma1.2p1_1022F.1_g248750 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.8e-141 506.9 461 55.3
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 2.3e-141 506.5 461 54.7
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 2.3e-141 506.5 503 51.9
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 4.0e-141 505.8 466 55.8
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 5.2e-141 505.4 482 53.3
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 5.2e-141 505.4 471 53.1
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 8.9e-141 504.6 462 55.0
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 2.0e-140 503.4 467 54.0
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 3.4e-140 502.7 516 51.0
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 9.8e-140 501.1 462 54.1
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 9.8e-140 501.1 470 53.4
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 9.8e-140 501.1 522 51.1
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 9.8e-140 501.1 469 52.7
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 1.7e-139 500.4 486 53.7
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 2.2e-139 500.0 462 55.4
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 3.7e-139 499.2 464 53.4
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 6.3e-139 498.4 451 54.1
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 6.3e-139 498.4 464 54.1
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 1.8e-138 496.9 458 54.4
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 1.8e-138 496.9 466 53.4
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 2.4e-138 496.5 465 53.3
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 3.2e-138 496.1 498 51.2
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 4.1e-138 495.7 471 53.5
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 4.1e-138 495.7 472 53.2
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 4.1e-138 495.7 472 53.2
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 5.4e-138 495.4 471 53.3
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 5.4e-138 495.4 471 53.3
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 9.2e-138 494.6 557 46.7
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 3.5e-137 492.7 500 50.4
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 7.8e-137 491.5 487 51.7
EL10Ac8g18271 Beta vulgaris HOM05D000306 ORTHO05D005993 1.7e-136 490.3 454 53.5
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 2.3e-136 490.0 495 51.9
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 2.5e-135 486.5 466 53.4
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 1.3e-131 474.2 573 45.0
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 2.4e-130 469.9 473 51.8
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 2.4e-130 469.9 474 51.3
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 6.0e-129 465.3 496 50.0
SalBow6G4076 Salvia bowleyana HOM05D000306 ORTHO05D005993 3.3e-127 459.5 448 52.7
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 5.6e-127 458.8 354 61.3
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 5.6e-127 458.8 463 49.7
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 9.2e-122 441.4 330 61.2
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 1.1e-119 434.5 315 65.7
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 1.1e-119 434.5 350 60.6
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 1.5e-103 380.9 522 40.6
CARHR271360 Cardamine hirsuta HOM05D000306 ORTHO05D005993 1.1e-101 374.8 401 47.9
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 1.5e-95 354.4 473 45.2
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 9.0e-93 345.1 474 41.6
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 1.0e-88 331.6 480 40.2
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 2.3e-72 277.3 198 63.1
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 3.8e-67 260.0 177 67.2
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 1.9e-66 257.7 530 33.4
Hma1.2p1_0863F.1_g230000 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.8e-61 241.1 304 46.1
Cfa024735 Carpinus fangiana HOM05D000306 ORTHO05D005993 5.0e-59 233.0 465 34.6
CSS0003956 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 7.9e-57 225.7 205 51.2
BraA02t08063Z Brassica rapa HOM05D000306 ORTHO05D005993 7.4e-55 219.2 145 67.6
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 1.6e-49 201.4 129 72.1
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 1.6e-49 201.4 129 72.1
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 8.0e-49 199.1 129 71.3
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 6.7e-48 196.1 129 70.5
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 6.7e-48 196.1 129 70.5
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 6.3e-46 189.5 145 63.4
BcaC03g16218 Brassica carinata HOM05D000306 ORTHO05D005993 3.1e-45 187.2 123 70.7
Cfa016931 Carpinus fangiana HOM05D000306 ORTHO05D005993 1.2e-44 185.3 217 43.8
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 1.0e-40 172.2 129 64.3
SEGI_33461 Sequoiadendron giganteum HOM05D000306 ORTHO05D005993 1.8e-37 161.4 76 98.7
CSS0007035 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 7.0e-37 159.5 211 44.1
BcaC05g25358 Brassica carinata HOM05D000306 ORTHO05D005993 4.0e-32 143.7 104 62.5
BolC2t10024H Brassica oleracea HOM05D000306 ORTHO05D005993 2.8e-25 120.9 65 83.1
arahy.Tifrunner.gnm1.ann1.JGW43E Arachis hypogaea HOM05D000306 ORTHO05D005993 5.8e-15 86.7 206 30.1
arahy.Tifrunner.gnm1.ann1.F592RX Arachis hypogaea HOM05D000306 ORTHO05D007065 2.4e-13 81.3 92 44.6
arahy.Tifrunner.gnm1.ann1.HK2K9G Arachis hypogaea HOM05D006158 ORTHO05D007065 3.3e-10 70.9 58 53.4
arahy.Tifrunner.gnm1.ann1.S0LUWR Arachis hypogaea HOM05D000306 ORTHO05D007065 1.6e-09 68.6 53 52.8
CSS0028993 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 6.8e-08 63.2 37 75.7


User provided reference genes

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