Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35740 Sequoiadendron giganteum HOM05D005402 ORTHO05D007036 3.1e-215 751.5 375 100.0
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 3.1e-98 362.8 362 52.8
CANSAT56G4097 Cannabis sativa HOM05D005402 ORTHO05D007036 5.8e-97 358.6 364 51.1
MBI02_g15380_MAGBIO Magnolia biondii HOM05D005402 ORTHO05D007036 9.9e-97 357.8 375 49.9
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 2.2e-96 356.7 368 50.8
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 6.4e-96 355.1 365 50.1
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 2.4e-95 353.2 360 48.9
Hund23456 Selenicereus undatus HOM05D005402 ORTHO05D007036 2.4e-95 353.2 364 49.2
CDE05G1008 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 2.1e-94 350.1 359 49.9
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 2.1e-94 350.1 367 49.3
ATR0743G102 Amborella trichopoda HOM05D005402 ORTHO05D007036 7.8e-94 348.2 367 50.7
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 1.3e-93 347.4 363 48.5
Cfa000204 Carpinus fangiana HOM05D005402 ORTHO05D007036 1.7e-93 347.1 367 48.8
GSVIVG01012705001 Vitis vinifera HOM05D005402 ORTHO05D007036 2.3e-93 346.7 360 49.7
Gohir.A05G171400 Gossypium hirsutum HOM05D005402 ORTHO05D007036 3.9e-93 345.9 366 48.1
PSO541G1465 Papaver somniferum HOM05D005402 ORTHO05D007036 3.9e-93 345.9 362 50.6
Sed0000438 Sechium edule HOM05D005402 ORTHO05D007036 3.9e-93 345.9 359 48.5
PSO675G3880 Papaver somniferum HOM05D005402 ORTHO05D007036 5.1e-93 345.5 362 50.8
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 5.1e-93 345.5 368 48.6
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 6.6e-93 345.1 366 48.4
Lalb_Chr07g0177141 Lupinus albus HOM05D005402 ORTHO05D007036 1.1e-92 344.4 366 48.6
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 1.5e-92 344.0 363 48.8
Lj4g0015196 Lotus japonicus HOM05D005402 ORTHO05D007036 1.5e-92 344.0 366 48.1
EL10Ac3g06734 Beta vulgaris HOM05D005402 ORTHO05D007036 1.9e-92 343.6 333 52.3
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 1.9e-92 343.6 361 49.3
Duzib235G0987 Durio zibethinus HOM05D005402 ORTHO05D007036 1.9e-92 343.6 361 48.8
Atru.chr10.2252 Acer truncatum HOM05D005402 ORTHO05D007036 2.5e-92 343.2 367 47.1
Gohir.D05G174500 Gossypium hirsutum HOM05D005402 ORTHO05D007036 2.5e-92 343.2 366 48.1
Thecc.06G223300 Theobroma cacao HOM05D005402 ORTHO05D007036 4.3e-92 342.4 362 48.6
MELO3C007401.2 Cucumis melo HOM05D005402 ORTHO05D007036 5.6e-92 342.0 361 48.2
Ciclev10014465m.g Citrus clementina HOM05D005402 ORTHO05D007036 7.3e-92 341.7 369 48.5
Medtr4g132340 Medicago truncatula HOM05D005402 ORTHO05D007036 1.3e-91 340.9 360 49.2
Gorai.009G179800 Gossypium raimondii HOM05D005402 ORTHO05D007036 2.1e-91 340.1 366 47.5
Mapoly0165s0012 Marchantia polymorpha HOM05D005402 ORTHO05D007036 2.1e-91 340.1 332 53.3
FAN04G1555 Fragaria x ananassa HOM05D005402 ORTHO05D007036 3.6e-91 339.3 368 48.4
Oeu040335.1 Olea europaea HOM05D005402 ORTHO05D007036 3.6e-91 339.3 359 49.3
PGR004G0080 Punica granatum HOM05D005402 ORTHO05D007036 4.8e-91 339.0 359 47.4
CsaV3_6G048920 Cucumis sativus L. HOM05D005402 ORTHO05D007036 8.1e-91 338.2 361 47.9
FvH4_5g29980 Fragaria vesca HOM05D005402 ORTHO05D007036 1.1e-90 337.8 368 48.4
Glyma.07G261900 Glycine max HOM05D005402 ORTHO05D007036 1.1e-90 337.8 366 47.8
Phvul.003G080200 Phaseolus vulgaris HOM05D005402 ORTHO05D007036 1.1e-90 337.8 361 49.0
TPR.G36999 Trifolium pratense HOM05D005402 ORTHO05D007036 1.1e-90 337.8 362 48.9
FAN13G2175 Fragaria x ananassa HOM05D005402 ORTHO05D007036 1.4e-90 337.4 368 48.1
Cc09_g01510 Coffea canephora HOM05D005402 ORTHO05D007036 2.4e-90 336.7 359 46.5
VMungo1215G1509 Vigna mungo HOM05D005402 ORTHO05D007036 2.4e-90 336.7 365 49.0
FAN08G3587 Fragaria x ananassa HOM05D005402 ORTHO05D007036 3.1e-90 336.3 368 48.1
Peaxi162Scf00307g01422 Petunia axillaris HOM05D005402 ORTHO05D007036 3.1e-90 336.3 361 48.2
Ca_21074_v3 Cicer arietinum L. HOM05D005402 ORTHO05D007036 4.0e-90 335.9 364 48.9
FAN18G2172 Fragaria x ananassa HOM05D005402 ORTHO05D007036 4.0e-90 335.9 368 48.4
Eucgr.D01347 Eucalyptus grandis HOM05D005402 ORTHO05D007036 9.0e-90 334.7 359 47.1
Sc05g0009280 Simmondsia chinensis HOM05D005402 ORTHO05D007036 9.0e-90 334.7 370 46.5
RcHm_v2.0_Chr7g0223851 Rosa chinensis HOM05D005402 ORTHO05D007036 2.0e-89 333.6 368 47.8
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 2.0e-89 333.6 349 47.9
HanXRQChr15g0470411 Helianthus annuus HOM05D005402 ORTHO05D007036 3.4e-89 332.8 364 47.0
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 5.8e-89 332.0 364 47.8
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 5.8e-89 332.0 362 48.9
arahy.Tifrunner.gnm1.ann1.I0ZCH2 Arachis hypogaea HOM05D005402 ORTHO05D007036 7.6e-89 331.6 360 47.2
COL.COLO4_31795 Corchorus olitorius HOM05D005402 ORTHO05D007036 9.9e-89 331.3 367 47.4
Nitab4.5_0004712g0050 Nicotiana tabacum HOM05D005402 ORTHO05D007036 9.9e-89 331.3 384 45.8
Sp7g26160 Schrenkiella parvula HOM05D005402 ORTHO05D007036 1.3e-88 330.9 361 47.1
Aqoxy1G03121 Aquilegia oxysepala HOM05D005402 ORTHO05D007036 1.7e-88 330.5 361 46.5
Lsat_1_v5_gn_7_16460 Lactuca sativa HOM05D005402 ORTHO05D007036 1.7e-88 330.5 368 46.2
Glyma.17G012200 Glycine max HOM05D005402 ORTHO05D007036 2.2e-88 330.1 366 47.5
Lj2C266G9 Lonicera japonica HOM05D005402 ORTHO05D007036 2.2e-88 330.1 330 51.2
CAN.G128.67 Capsicum annuum HOM05D005402 ORTHO05D007036 4.9e-88 328.9 360 47.2
arahy.Tifrunner.gnm1.ann1.T40CTJ Arachis hypogaea HOM05D005402 ORTHO05D007036 8.4e-88 328.2 360 46.7
Thhalv10024642m.g Eutrema salsugineum HOM05D005402 ORTHO05D007036 1.1e-87 327.8 359 46.8
TWI63G0339 Tripterygium wilfordii HOM05D005402 ORTHO05D007036 1.4e-87 327.4 361 48.2
AagrBONN_evm.TU.Sc2ySwM_228.882 Anthoceros agrestis HOM05D005402 ORTHO05D007036 1.9e-87 327.0 357 49.0
Sopen02g011290 Solanum pennellii HOM05D005402 ORTHO05D007036 1.9e-87 327.0 359 46.5
MD15G1066800 Malus domestica HOM05D005402 ORTHO05D007036 3.2e-87 326.2 369 44.2
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 3.2e-87 326.2 361 46.8
Os02g0103900 Oryza sativa ssp. japonica HOM05D005402 ORTHO05D007036 4.2e-87 325.9 386 44.8
Solyc02g032920.3 Solanum lycopersicum HOM05D005402 ORTHO05D007036 5.4e-87 325.5 359 46.2
AT4G28200 Arabidopsis thaliana HOM05D005402 ORTHO05D007036 7.1e-87 325.1 363 47.7
AL7G24400 Arabidopsis lyrata HOM05D005402 ORTHO05D007036 9.3e-87 324.7 363 46.8
AUR62015290 Chenopodium quinoa HOM05D005402 ORTHO05D007036 1.2e-86 324.3 364 46.7
Psat4g006080 Pisum sativum HOM05D005402 ORTHO05D007036 2.7e-86 323.2 374 46.0
CARHR235910 Cardamine hirsuta HOM05D005402 ORTHO05D007036 3.5e-86 322.8 360 46.4
BcaB03g12559 Brassica carinata HOM05D005402 ORTHO05D007036 4.6e-86 322.4 359 46.2
Aa31LG6G3970 Aethionema arabicum HOM05D005402 ORTHO05D007036 7.9e-86 321.6 360 47.5
Migut.M01334 Erythranthe guttata HOM05D005402 ORTHO05D007036 7.9e-86 321.6 357 46.5
PGSC0003DMG400022060 Solanum tuberosum HOM05D005402 ORTHO05D007036 7.9e-86 321.6 359 45.7
C08p10670 Brassica napus HOM05D005402 ORTHO05D007036 3.0e-85 319.7 341 49.0
BcaC07g38316 Brassica carinata HOM05D005402 ORTHO05D007036 6.7e-85 318.5 341 48.7
BolC8t48740H Brassica oleracea HOM05D005402 ORTHO05D007036 6.7e-85 318.5 341 48.7
DCAR_028193 Daucus carota HOM05D000001 ORTHO05D007036 6.7e-85 318.5 360 46.1
Ah.10g032740 Amaranthus hybridus HOM05D005402 ORTHO05D007036 1.1e-84 317.8 360 44.7
MSTRG.7199 Avicennia marina HOM05D005402 ORTHO05D007036 1.1e-84 317.8 359 47.1
Pp3c5_4450 Physcomitrium patens HOM05D005402 ORTHO05D007036 1.1e-84 317.8 349 48.7
HPP92_012414 Vanilla planifolia HOM05D005402 ORTHO05D007036 4.3e-84 315.8 374 47.6
Carub.0007s1256 Capsella rubella HOM05D005402 ORTHO05D007036 1.6e-83 313.9 361 45.7
MD08G1079900 Malus domestica HOM05D005402 ORTHO05D007036 2.8e-83 313.2 366 43.2
THA.LOC104806309 Tarenaya hassleriana HOM05D005402 ORTHO05D007036 2.8e-83 313.2 359 47.9
Potri.007G040000 Populus trichocarpa HOM05D005402 ORTHO05D007036 8.1e-83 311.6 365 46.6
A08p20200 Brassica napus HOM05D005402 ORTHO05D007036 1.8e-82 310.5 339 46.6
BraA08t33979Z Brassica rapa HOM05D005402 ORTHO05D007036 1.8e-82 310.5 339 46.6
Sabra07G0036200 Salix brachista HOM05D005402 ORTHO05D007036 3.1e-82 309.7 364 47.5
ECA236G3723 Erigeron canadensis HOM05D005402 ORTHO05D000490 4.0e-82 309.3 331 48.0
SalBow8G4792 Salvia bowleyana HOM05D005402 ORTHO05D007036 9.0e-82 308.1 335 48.4
Actinidia11859 Actinidia chinensis HOM05D005402 ORTHO05D007036 3.4e-81 306.2 364 46.4
AUR62032734 Chenopodium quinoa HOM05D005402 ORTHO05D007036 1.9e-79 300.4 375 44.8
SMO203G0067 Selaginella moellendorffii HOM05D005402 ORTHO05D007036 6.0e-78 295.4 361 44.3
BcaB03g12558 Brassica carinata HOM05D005402 ORTHO05D007036 2.3e-77 293.5 361 43.5
Peaxi162Scf00394g00020 Petunia axillaris HOM05D005402 ORTHO05D007036 5.7e-76 288.9 361 44.9
unitig_748.g7549 Utricularia gibba HOM05D005402 ORTHO05D007036 1.9e-71 273.9 364 44.5
SGA_v2.0_scaffold7G03813 Striga asiatica HOM05D005402 ORTHO05D007036 2.8e-67 260.0 339 40.4
Hma1.2p1_0412F.1_g147310 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 5.9e-65 252.3 271 45.0
SGA_v2.0_scaffold4G01907 Striga asiatica HOM05D005402 ORTHO05D007036 3.7e-59 233.0 347 38.9
CBR_g31384 Chara braunii HOM05D005402 ORTHO05D007036 9.4e-55 218.4 415 33.0
Cre10.g442000 Chlamydomonas reinhardtii HOM05D005402 ORTHO05D007036 2.7e-54 216.9 334 39.2
Zm00001eb118290 Zea mays HOM05D005402 ORTHO05D007036 3.8e-48 196.4 230 43.9
AagrBONN_evm.TU.Sc2ySwM_228.888 Anthoceros agrestis HOM05D005402 ORTHO05D007036 2.8e-27 127.1 101 58.4
MCO01G148 Micromonas commoda HOM05D005402 ORTHO05D007036 7.0e-26 122.5 219 34.7
AagrBONN_evm.TU.Sc2ySwM_228.894 Anthoceros agrestis HOM05D005402 ORTHO05D007036 5.6e-23 112.8 86 58.1
RcHm_v2.0_Chr7g0223941 Rosa chinensis HOM05D005402 ORTHO05D007036 2.0e-20 104.4 82 54.9
AagrBONN_evm.TU.Sc2ySwM_228.885 Anthoceros agrestis HOM05D005402 ORTHO05D007036 5.7e-20 102.8 145 45.5
Cfa022130 Carpinus fangiana HOM05D005402 ORTHO05D007036 1.1e-18 98.6 253 30.8
CARHR228840 Cardamine hirsuta HOM05D005402 ORTHO05D007036 2.3e-13 80.9 62 61.3
RcHm_v2.0_Chr7g0223951 Rosa chinensis HOM05D005402 ORTHO05D007036 3.4e-12 77.0 132 36.4
Hma1.2p1_0660F.1_g197590 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.2e-06 58.5 65 49.2


User provided reference genes

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