Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35715 Sequoiadendron giganteum HOM05D001068 ORTHO05D003481 1.5e-122 443.0 240 100.0
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 1.1e-21 107.8 50 94.0
SEGI_01087 Sequoiadendron giganteum HOM05D001068 ORTHO05D003875 5.9e-18 95.5 48 89.6
SEGI_00592 Sequoiadendron giganteum HOM05D000522 ORTHO05D019803 9.7e-13 78.2 60 71.7
SEGI_34208 Sequoiadendron giganteum HOM05D001090 ORTHO05D002687 5.3e-11 72.4 48 77.1
SEGI_03475 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 6.5e-09 65.5 43 86.0
Duzib084G1186 Durio zibethinus HOM05D001068 ORTHO05D003875 1.9e-08 63.9 57 54.4
SEGI_25291 Sequoiadendron giganteum HOM05D003177 ORTHO05D003481 3.2e-08 63.2 60 66.7
CSS0035524 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 4.2e-08 62.8 57 52.6
Nn6g33873 Nelumbo nucifera HOM05D001068 ORTHO05D003875 5.5e-08 62.4 57 52.6
CANSAT21G1427 Cannabis sativa HOM05D001068 ORTHO05D003875 7.2e-08 62.0 57 52.6
Lalb_Chr16g0386611 Lupinus albus HOM05D001068 ORTHO05D003875 1.6e-07 60.8 80 43.8
CDE02G3830 Ceratophyllum demersum HOM05D001068 ORTHO05D003875 2.1e-07 60.5 57 50.9
PSO782G5462 Papaver somniferum HOM05D001068 ORTHO05D003875 2.1e-07 60.5 56 53.6
PSO063G6720 Papaver somniferum HOM05D001068 ORTHO05D003875 2.7e-07 60.1 56 53.6
SEGI_19921 Sequoiadendron giganteum HOM05D000599 ORTHO05D006883 2.7e-07 60.1 54 66.7
GSVIVG01005812001 Vitis vinifera HOM05D001068 ORTHO05D003875 2.7e-07 60.1 59 49.2
MELO3C005515.2 Cucumis melo HOM05D001068 ORTHO05D003875 3.6e-07 59.7 56 53.6
CsaV3_5G004440 Cucumis sativus L. HOM05D001068 ORTHO05D003875 3.6e-07 59.7 56 53.6
Gohir.A09G196500 Gossypium hirsutum HOM05D001068 ORTHO05D003875 3.6e-07 59.7 57 50.9
Gohir.D09G191100 Gossypium hirsutum HOM05D001068 ORTHO05D003875 3.6e-07 59.7 57 50.9
Gorai.006G213900 Gossypium raimondii HOM05D001068 ORTHO05D003875 3.6e-07 59.7 57 50.9
TWI15G0242 Tripterygium wilfordii HOM05D001068 ORTHO05D003875 3.6e-07 59.7 57 50.9
Actinidia14405 Actinidia chinensis HOM05D001068 ORTHO05D003875 4.7e-07 59.3 56 51.8
CSS0004981 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 4.7e-07 59.3 57 49.1
Cpa.g.sc89.71 Carica papaya HOM05D001068 ORTHO05D003875 4.7e-07 59.3 56 51.8
Dinv39171 Davidia involucrata HOM05D001068 ORTHO05D003875 4.7e-07 59.3 56 51.8
SalBow6G3759 Salvia bowleyana HOM05D001068 ORTHO05D003875 4.7e-07 59.3 56 51.8
Manes.02G041600 Manihot esculenta HOM05D001068 ORTHO05D003875 6.1e-07 58.9 57 50.9
Ah.12g054350 Amaranthus hybridus HOM05D001068 ORTHO05D003875 8.0e-07 58.5 56 50.0
CSS0037699 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D003875 8.0e-07 58.5 57 49.1
ClCG01G004240 Citrullus lanatus HOM05D001068 ORTHO05D003875 8.0e-07 58.5 56 51.8
Duzib068G1125 Durio zibethinus HOM05D001068 ORTHO05D003875 8.0e-07 58.5 57 50.9
TAR629G1427 Trochodendron aralioides HOM05D001068 ORTHO05D003875 8.0e-07 58.5 56 50.0
ATR0057G009 Amborella trichopoda HOM05D001068 ORTHO05D003875 1.0e-06 58.2 56 48.2
Lalb_Chr09g0329981 Lupinus albus HOM05D001068 ORTHO05D003875 1.0e-06 58.2 80 41.2
Lj4g0020838 Lotus japonicus HOM05D001068 ORTHO05D003875 1.4e-06 57.8 80 41.2
Os06g0103500 Oryza sativa ssp. japonica HOM05D001068 ORTHO05D003875 1.4e-06 57.8 57 49.1
Sed0012317 Sechium edule HOM05D001068 ORTHO05D003875 1.4e-06 57.8 56 51.8
Cfa012691 Carpinus fangiana HOM05D001068 ORTHO05D003875 1.8e-06 57.4 56 50.0
Haze_07942 Corylus avellana HOM05D001068 ORTHO05D003875 1.8e-06 57.4 56 50.0
ECA233G2258 Erigeron canadensis HOM05D001068 ORTHO05D003875 1.8e-06 57.4 81 42.0
HanXRQChr16g0501091 Helianthus annuus HOM05D001068 ORTHO05D003875 1.8e-06 57.4 80 41.2
Phvul.003G222800 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 1.8e-06 57.4 80 41.2
arahy.Tifrunner.gnm1.ann1.MWEA9C Arachis hypogaea HOM05D001068 ORTHO05D003875 2.3e-06 57.0 56 50.0
arahy.Tifrunner.gnm1.ann1.QXG3RX Arachis hypogaea HOM05D001068 ORTHO05D003875 2.3e-06 57.0 56 50.0
MSTRG.12124 Avicennia marina HOM05D001068 ORTHO05D003875 2.3e-06 57.0 56 50.0
Migut.A01136 Erythranthe guttata HOM05D001068 ORTHO05D003875 2.3e-06 57.0 56 50.0
Gohir.A11G027400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 47.4
Gohir.A12G215400 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 49.1
Gohir.D11G026600 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 47.4
Gohir.D12G218000 Gossypium hirsutum HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 49.1
Gorai.007G028900 Gossypium raimondii HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 47.4
Gorai.008G233600 Gossypium raimondii HOM05D001068 ORTHO05D003875 2.3e-06 57.0 57 49.1
Atru.chr9.1272 Acer truncatum HOM05D001068 ORTHO05D003875 3.0e-06 56.6 56 48.2
COL.COLO4_37120 Corchorus olitorius HOM05D001068 ORTHO05D003875 3.0e-06 56.6 57 47.4
Rhsim11G0003700 Rhododendron simsii HOM05D001068 ORTHO05D003875 3.0e-06 56.6 56 48.2
Thecc.03G247900 Theobroma cacao HOM05D001068 ORTHO05D003875 3.0e-06 56.6 57 45.6
CiPaw.11G081900 Carya illinoinensis HOM05D001068 ORTHO05D003875 3.9e-06 56.2 57 49.1
Lsat_1_v5_gn_6_18061 Lactuca sativa HOM05D001068 ORTHO05D003875 3.9e-06 56.2 80 41.2
SGA_v2.0_scaffold199G41219 Striga asiatica HOM05D001068 ORTHO05D003875 3.9e-06 56.2 57 49.1
VMungo1215G1615 Vigna mungo HOM05D001068 ORTHO05D003875 3.9e-06 56.2 57 49.1
AL7G37930 Arabidopsis lyrata HOM05D001068 ORTHO05D003875 5.2e-06 55.8 57 49.1
AT4G16760 Arabidopsis thaliana HOM05D001068 ORTHO05D003875 5.2e-06 55.8 57 49.1
AUR62007112 Chenopodium quinoa HOM05D001068 ORTHO05D003875 5.2e-06 55.8 56 48.2
Ciclev10019196m.g Citrus clementina HOM05D001068 ORTHO05D003875 5.2e-06 55.8 56 50.0
Manes.01G083700 Manihot esculenta HOM05D001068 ORTHO05D003875 5.2e-06 55.8 57 49.1
QL12p011360 Quercus lobata HOM05D001068 ORTHO05D003875 5.2e-06 55.8 56 48.2
Sed0021431 Sechium edule HOM05D001068 ORTHO05D003875 5.2e-06 55.8 56 50.0
vmacro00007 Vaccinium macrocarpon HOM05D001068 ORTHO05D003875 5.2e-06 55.8 56 48.2
Zm00001eb379490 Zea mays HOM05D001068 ORTHO05D003875 5.2e-06 55.8 57 47.4
Ca_24593_v3 Cicer arietinum L. HOM05D001068 ORTHO05D003875 6.7e-06 55.5 56 48.2
Phvul.002G056700 Phaseolus vulgaris HOM05D001068 ORTHO05D003875 6.7e-06 55.5 57 49.1
SEGI_04770 Sequoiadendron giganteum HOM05D001068 ORTHO05D030031 6.7e-06 55.5 57 49.1
SEGI_24935 Sequoiadendron giganteum HOM05D020712 ORTHO05D015571 6.7e-06 55.5 48 52.1
TPR.G37610 Trifolium pratense HOM05D001068 ORTHO05D003875 6.7e-06 55.5 56 48.2
Eucgr.E00406 Eucalyptus grandis HOM05D001068 ORTHO05D003875 8.8e-06 55.1 56 46.4


User provided reference genes

Program Settings