Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35470 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 4.5e-138 494.6 250 100.0
SEGI_11710 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.8e-119 432.2 214 100.0
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 4.1e-46 189.1 220 44.1
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 7.7e-45 184.9 225 44.4
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 1.0e-44 184.5 228 44.3
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 5.0e-44 182.2 224 43.8
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 5.0e-44 182.2 227 43.6
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 6.5e-44 181.8 229 42.8
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 1.1e-43 181.0 226 43.8
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 1.1e-43 181.0 226 42.0
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 2.5e-43 179.9 228 45.2
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 2.5e-43 179.9 225 43.1
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 5.5e-43 178.7 226 42.0
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 7.2e-43 178.3 218 42.7
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 2.1e-42 176.8 228 42.5
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.7e-42 176.4 221 40.3
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 2.7e-42 176.4 226 43.4
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 3.6e-42 176.0 226 39.8
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 1.0e-41 174.5 224 42.9
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 1.8e-41 173.7 218 42.2
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 1.8e-41 173.7 224 42.4
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 2.3e-41 173.3 228 42.5
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 3.0e-41 172.9 221 40.3
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 3.9e-41 172.6 220 41.4
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 5.1e-41 172.2 226 42.9
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 6.7e-41 171.8 224 41.5
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 6.7e-41 171.8 224 41.1
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 6.7e-41 171.8 223 39.5
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.1e-40 171.0 221 39.8
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 1.5e-40 170.6 226 37.6
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 2.0e-40 170.2 225 41.3
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.6e-40 169.9 221 39.4
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 2.6e-40 169.9 225 41.3
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 4.4e-40 169.1 225 40.9
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 7.4e-40 168.3 217 41.5
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 1.3e-39 167.5 228 42.1
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 1.3e-39 167.5 224 39.7
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 1.7e-39 167.2 232 42.2
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 2.2e-39 166.8 228 40.8
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 2.8e-39 166.4 230 42.6
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 3.7e-39 166.0 251 34.7
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 3.7e-39 166.0 229 41.0
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 3.7e-39 166.0 223 39.0
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 8.2e-39 164.9 217 41.9
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 8.2e-39 164.9 227 39.2
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 1.4e-38 164.1 223 39.5
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.8e-38 163.7 228 40.8
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 4.1e-38 162.5 231 40.3
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 4.1e-38 162.5 206 42.7
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 4.1e-38 162.5 226 39.8
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 6.9e-38 161.8 227 39.2
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 9.1e-38 161.4 227 39.6
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 1.5e-37 160.6 230 41.3
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 1.5e-37 160.6 229 39.7
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 1.5e-37 160.6 222 41.4
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 2.6e-37 159.8 239 40.2
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 3.4e-37 159.5 219 41.6
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 5.9e-37 158.7 231 42.9
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 5.9e-37 158.7 224 40.2
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 1.7e-36 157.1 205 41.0
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 3.8e-36 156.0 183 42.1
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 3.8e-36 156.0 228 39.9
Hma1.2p1_0074F.1_g038720 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 5.0e-36 155.6 231 39.8
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 6.5e-36 155.2 219 40.6
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 8.5e-36 154.8 185 41.1
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 1.1e-35 154.5 226 37.2
QL10p065024 Quercus lobata HOM05D004392 ORTHO05D004846 1.9e-35 153.7 225 39.1
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 2.5e-35 153.3 226 38.1
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 5.5e-35 152.1 205 41.0
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 2.7e-34 149.8 224 38.8
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 4.7e-34 149.1 222 38.3
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 4.7e-34 149.1 223 39.5
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 4.7e-34 149.1 219 39.3
vmacro00027 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 4.7e-34 149.1 253 36.4
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 7.9e-34 148.3 219 41.1
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 7.9e-34 148.3 225 38.7
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 2.3e-33 146.7 219 39.7
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 2.3e-33 146.7 224 40.2
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 5.2e-33 145.6 216 37.5
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.5e-32 144.1 223 35.0
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 2.0e-32 143.7 234 37.6
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 2.0e-32 143.7 208 37.5
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 3.3e-32 142.9 216 37.0
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 1.3e-31 141.0 185 40.0
CAN.G929.33 Capsicum annuum HOM05D004392 ORTHO05D004846 6.3e-31 138.7 208 37.0
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 1.1e-30 137.9 208 38.0
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 1.4e-30 137.5 170 42.9
CARHR249530 Cardamine hirsuta HOM05D004392 ORTHO05D004846 4.1e-30 136.0 212 38.7
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 1.2e-29 134.4 221 37.6
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 1.6e-29 134.0 221 36.2
Os02g0124700 Oryza sativa ssp. japonica HOM05D004392 ORTHO05D004846 1.6e-29 134.0 223 34.5
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 4.5e-29 132.5 218 33.0
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 6.5e-28 128.6 203 35.5
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 2.5e-27 126.7 204 33.8
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 1.2e-26 124.4 228 35.1
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 1.6e-26 124.0 206 35.9
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 1.6e-26 124.0 225 34.7
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 1.6e-26 124.0 320 29.4
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 2.7e-26 123.2 208 34.6
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 4.7e-26 122.5 225 34.2
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 8.0e-26 121.7 218 32.6
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 1.0e-25 121.3 204 33.8
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 1.0e-25 121.3 204 33.8
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 2.3e-25 120.2 230 33.9
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 2.3e-25 120.2 230 33.9
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 8.8e-25 118.2 232 31.9
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 1.7e-23 114.0 187 34.2
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 2.7e-21 106.7 129 40.3
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 4.4e-16 89.4 210 31.9
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 6.5e-12 75.5 235 27.2
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 1.4e-09 67.8 164 27.4
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 8.8e-09 65.1 223 26.5


User provided reference genes

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