Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35238 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 4.5e-126 454.5 217 100.0
SEGI_19429 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 7.4e-28 128.3 79 74.7
SEGI_41073 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.2e-23 112.8 67 74.6
SEGI_01428 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 1.2e-22 110.9 125 44.8
SEGI_08142 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 2.7e-22 109.8 97 49.5
SEGI_16755 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 1.6e-19 100.5 97 56.7
SEGI_25504 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.6e-19 100.5 84 65.5
SEGI_29733 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.6e-19 100.5 84 65.5
SEGI_12875 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 6.3e-19 98.6 75 66.7
SEGI_29065 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 1.8e-18 97.1 76 64.5
SEGI_38256 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.3e-18 95.5 79 64.6
SEGI_14469 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 5.0e-16 89.0 71 63.4
SEGI_35515 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 9.4e-15 84.7 76 59.2
SEGI_37136 Sequoiadendron giganteum HOM05D001608 ORTHO05D002070 2.7e-14 83.2 127 34.6
SEGI_34414 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 7.9e-14 81.6 76 56.6
SEGI_05969 Sequoiadendron giganteum HOM05D002048 ORTHO05D002146 1.4e-13 80.9 63 55.6
SEGI_30262 Sequoiadendron giganteum HOM05D000399 ORTHO05D000022 1.8e-13 80.5 132 39.4
SEGI_06023 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 5.1e-13 79.0 97 41.2
SEGI_02397 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 2.0e-12 77.0 127 35.4
SEGI_08678 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.6e-12 76.6 125 36.0
SEGI_19217 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.3e-12 76.3 126 34.9
SEGI_32552 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 7.4e-12 75.1 126 32.5
SEGI_05774 Sequoiadendron giganteum HOM05D000194 ORTHO05D000069 1.3e-11 74.3 133 31.6
SEGI_33748 Sequoiadendron giganteum HOM05D001782 ORTHO05D000022 1.3e-11 74.3 133 34.6
SEGI_38633 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.7e-11 72.8 117 34.2
SEGI_35665 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 4.8e-11 72.4 96 35.4
SEGI_11776 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 8.2e-11 71.6 125 33.6
SEGI_13799 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.4e-10 70.9 109 35.8
SEGI_36388 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.4e-10 70.9 121 31.4
SEGI_04765 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.8e-10 70.5 91 39.6
SEGI_24406 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.8e-10 70.5 92 37.0
SEGI_05670 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.4e-10 70.1 105 35.2
SEGI_10584 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.1e-10 69.7 99 37.4
SEGI_22667 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.1e-10 69.3 99 36.4
SEGI_11658 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 5.3e-10 68.9 107 33.6
SEGI_06679 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 1.2e-09 67.8 64 48.4
SEGI_07121 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.2e-09 67.8 61 50.8
SEGI_15436 Sequoiadendron giganteum HOM05D001690 ORTHO05D013089 1.5e-09 67.4 105 37.1
SEGI_27579 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.0e-09 67.0 94 37.2
SEGI_39148 Sequoiadendron giganteum HOM05D000352 ORTHO05D000260 2.0e-09 67.0 94 39.4
SEGI_00485 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.6e-09 66.6 104 32.7
SEGI_01670 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.6e-09 66.6 133 31.6
SEGI_35324 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.6e-09 66.6 76 40.8
SEGI_37996 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.6e-09 66.6 76 40.8
SEGI_23191 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 3.4e-09 66.2 84 38.1
SEGI_37765 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.4e-09 66.2 103 33.0
SEGI_33308 Sequoiadendron giganteum HOM05D000059 ORTHO05D002627 5.9e-09 65.5 78 44.9
Nn1g09993 Nelumbo nucifera HOM05D000155 ORTHO05D000022 7.7e-09 65.1 100 38.0
Nn1g10075 Nelumbo nucifera HOM05D000155 ORTHO05D000022 7.7e-09 65.1 100 38.0
Nn1g10093 Nelumbo nucifera HOM05D000155 ORTHO05D000022 7.7e-09 65.1 100 38.0
SEGI_32165 Sequoiadendron giganteum HOM05D000071 ORTHO05D002217 7.7e-09 65.1 75 45.3
SEGI_36007 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.3e-08 64.3 89 36.0
SEGI_16700 Sequoiadendron giganteum HOM05D002120 ORTHO05D002217 1.7e-08 63.9 77 48.1
SEGI_28676 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.2e-08 63.5 94 36.2
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 2.2e-08 63.5 99 40.4
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 2.9e-08 63.2 81 38.3
SEGI_01496 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.9e-08 63.2 79 39.2
SEGI_29890 Sequoiadendron giganteum HOM05D002120 ORTHO05D002217 2.9e-08 63.2 80 42.5
SEGI_32740 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 2.9e-08 63.2 76 40.8
MBI07_g16917_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.5e-08 62.0 98 41.8
SEGI_34838 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 6.5e-08 62.0 96 38.5
MD01G1057400 Malus domestica HOM05D000071 ORTHO05D000029 8.5e-08 61.6 81 39.5
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 8.5e-08 61.6 75 44.0
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 8.5e-08 61.6 75 44.0
SGA_v2.0_scaffold83G26408 Striga asiatica HOM05D000071 ORTHO05D000029 8.5e-08 61.6 67 43.3
SEGI_05107 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.1e-07 61.2 87 33.3
SEGI_26614 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.1e-07 61.2 89 34.8
arahy.Tifrunner.gnm1.ann1.G0IJW6 Arachis hypogaea HOM05D000155 ORTHO05D000022 1.4e-07 60.8 72 43.1
Medtr0087s0010 Medicago truncatula HOM05D000071 ORTHO05D000029 1.4e-07 60.8 77 39.0
SEGI_25910 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.4e-07 60.8 77 42.9
SGA_v2.0_scaffold83G26397 Striga asiatica HOM05D000071 ORTHO05D000029 1.4e-07 60.8 64 42.2
SEGI_04712 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.9e-07 60.5 77 41.6
Atru.chr10.950 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-07 60.1 76 38.2
MBI18_g28058_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 60.1 73 43.8
Medtr3g048590 Medicago truncatula HOM05D000071 ORTHO05D000029 2.5e-07 60.1 52 44.2
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 2.5e-07 60.1 103 35.9
SEGI_28975 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 2.5e-07 60.1 80 35.0
Duzib128G1172 Durio zibethinus HOM05D000155 ORTHO05D000022 3.2e-07 59.7 71 45.1
SEGI_05110 Sequoiadendron giganteum HOM05D000071 ORTHO05D002217 3.2e-07 59.7 80 40.0
SEGI_32746 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.2e-07 59.7 70 41.4
SGA_v2.0_scaffold439G51645 Striga asiatica HOM05D000071 ORTHO05D000029 3.2e-07 59.7 64 42.2
TPR.G20719 Trifolium pratense HOM05D000071 ORTHO05D000029 3.2e-07 59.7 51 43.1
MBI04_g26254_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000041 4.2e-07 59.3 147 33.3
PSO832G2217 Papaver somniferum HOM05D000003 ORTHO05D000651 4.2e-07 59.3 120 31.7
SEGI_40124 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 4.2e-07 59.3 78 41.0
arahy.Tifrunner.gnm1.ann1.0Q53RJ Arachis hypogaea HOM05D000155 ORTHO05D000022 5.5e-07 58.9 58 46.6
Medtr0087s0040 Medicago truncatula HOM05D000071 ORTHO05D000029 5.5e-07 58.9 78 37.2
Medtr3g452760 Medicago truncatula HOM05D000071 ORTHO05D000029 7.2e-07 58.5 52 44.2
SEGI_25728 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 7.2e-07 58.5 99 31.3
TPR.G6258 Trifolium pratense HOM05D000071 ORTHO05D000029 7.2e-07 58.5 77 36.4
Medtr6g016050 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016055 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016060 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016065 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016070 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016075 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016080 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016085 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016090 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016095 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016100 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016105 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016110 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016115 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016120 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016125 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
Medtr6g016130 Medicago truncatula HOM05D000071 ORTHO05D000029 9.4e-07 58.2 77 39.0
SEGI_15880 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 9.4e-07 58.2 76 43.4
SEGI_21792 Sequoiadendron giganteum HOM05D038634 ORTHO05D002217 9.4e-07 58.2 77 41.6
SEGI_32247 Sequoiadendron giganteum HOM05D000898 ORTHO05D000762 9.4e-07 58.2 91 31.9
Aqoxy7G02798 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.2e-06 57.8 116 31.9
MD15G1426700 Malus domestica HOM05D000071 ORTHO05D000029 1.2e-06 57.8 54 50.0
SEGI_35180 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.2e-06 57.8 133 31.6
SEGI_37256 Sequoiadendron giganteum HOM05D000071 ORTHO05D001565 1.2e-06 57.8 79 43.0
Aqoxy3G02438 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.6e-06 57.4 111 33.3
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.6e-06 57.4 114 30.7
CANSAT21G1199 Cannabis sativa HOM05D000071 ORTHO05D000029 1.6e-06 57.4 90 33.3
CANSAT21G1502 Cannabis sativa HOM05D000071 ORTHO05D000029 1.6e-06 57.4 134 28.4
Haze_06467 Corylus avellana HOM05D000071 ORTHO05D000029 1.6e-06 57.4 76 40.8
Rhsim01G0102000 Rhododendron simsii HOM05D000311 ORTHO05D000183 1.6e-06 57.4 54 40.7
SEGI_19066 Sequoiadendron giganteum HOM05D000225 ORTHO05D002520 1.6e-06 57.4 65 40.0
SEGI_25703 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 1.6e-06 57.4 73 41.1
Aqoxy1G02332 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 2.1e-06 57.0 73 41.1
Prupe.2G166100 Prunus persica HOM05D000071 ORTHO05D000029 2.1e-06 57.0 92 35.9
TPR.G13545 Trifolium pratense HOM05D000071 ORTHO05D000029 2.1e-06 57.0 51 41.2
Aqoxy1G00462 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.7e-06 56.6 110 31.8
arahy.Tifrunner.gnm1.ann1.744JFD Arachis hypogaea HOM05D000071 ORTHO05D000029 2.7e-06 56.6 62 38.7
arahy.Tifrunner.gnm1.ann1.Q3ZTZA Arachis hypogaea HOM05D000071 ORTHO05D000029 2.7e-06 56.6 62 38.7
COL.COLO4_30252 Corchorus olitorius HOM05D000071 ORTHO05D000029 2.7e-06 56.6 72 43.1
Haze_00087 Corylus avellana HOM05D000071 ORTHO05D000029 2.7e-06 56.6 84 36.9
Oeu060485.1 Olea europaea HOM05D000071 ORTHO05D000029 2.7e-06 56.6 61 42.6
Rhsim01G0101800 Rhododendron simsii HOM05D000311 ORTHO05D000183 2.7e-06 56.6 55 41.8
SEGI_10715 Sequoiadendron giganteum HOM05D002752 ORTHO05D000022 2.7e-06 56.6 77 39.0
SGA_v2.0_scaffold295G47540 Striga asiatica HOM05D000071 ORTHO05D000029 2.7e-06 56.6 67 41.8
TPR.G13560 Trifolium pratense HOM05D000071 ORTHO05D000029 2.7e-06 56.6 51 43.1
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 3.6e-06 56.2 72 40.3
arahy.Tifrunner.gnm1.ann1.A0KVP0 Arachis hypogaea HOM05D000071 ORTHO05D000029 3.6e-06 56.2 60 40.0
arahy.Tifrunner.gnm1.ann1.A6X6F1 Arachis hypogaea HOM05D000071 ORTHO05D000029 3.6e-06 56.2 60 40.0
MSTRG.27060 Avicennia marina HOM05D000071 ORTHO05D000029 3.6e-06 56.2 102 35.3
CiPaw.05G209700 Carya illinoinensis HOM05D000071 ORTHO05D000029 3.6e-06 56.2 103 38.8
GSVIVG01028766001 Vitis vinifera HOM05D000071 ORTHO05D000029 3.6e-06 56.2 81 38.3
arahy.Tifrunner.gnm1.ann1.XHB0TM Arachis hypogaea HOM05D000071 ORTHO05D000029 4.7e-06 55.8 79 39.2
CiPaw.05G175800 Carya illinoinensis HOM05D000071 ORTHO05D000029 4.7e-06 55.8 103 36.9
CiPaw.05G208900 Carya illinoinensis HOM05D000071 ORTHO05D000029 4.7e-06 55.8 51 47.1
CiPaw.05G209300 Carya illinoinensis HOM05D000071 ORTHO05D000029 4.7e-06 55.8 51 47.1
Medtr3g449240 Medicago truncatula HOM05D000071 ORTHO05D000029 4.7e-06 55.8 52 40.4
Nn4g25059 Nelumbo nucifera HOM05D000071 ORTHO05D000029 4.7e-06 55.8 51 52.9
Oeu005947.1 Olea europaea HOM05D000071 ORTHO05D000029 4.7e-06 55.8 88 36.4
SEGI_09971 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 4.7e-06 55.8 99 34.3
SEGI_20802 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 4.7e-06 55.8 130 31.5
SEGI_35704 Sequoiadendron giganteum HOM05D022045 ORTHO05D006441 4.7e-06 55.8 80 35.0
arahy.Tifrunner.gnm1.ann1.E6YGCE Arachis hypogaea HOM05D000071 ORTHO05D000029 6.1e-06 55.5 60 40.0
arahy.Tifrunner.gnm1.ann1.KV4SPR Arachis hypogaea HOM05D000071 ORTHO05D000029 6.1e-06 55.5 60 40.0
ECA234G1461 Erigeron canadensis HOM05D000071 ORTHO05D000029 6.1e-06 55.5 67 40.3
MBI17_g29208_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 6.1e-06 55.5 66 39.4
MD15G1427000 Malus domestica HOM05D000071 ORTHO05D000029 6.1e-06 55.5 49 51.0
Manes.01G039084 Manihot esculenta HOM05D000071 ORTHO05D000029 6.1e-06 55.5 59 49.2
SEGI_16227 Sequoiadendron giganteum HOM05D000592 ORTHO05D000900 6.1e-06 55.5 95 34.7
Thecc.07G082900 Theobroma cacao HOM05D000071 ORTHO05D000029 6.1e-06 55.5 85 35.3
Thecc.07G114800 Theobroma cacao HOM05D000053 ORTHO05D000035 6.1e-06 55.5 57 36.8
Cc11_g06500 Coffea canephora HOM05D000071 ORTHO05D000029 7.9e-06 55.1 50 52.0
Thhalv10021278m.g Eutrema salsugineum HOM05D001690 ORTHO05D002627 7.9e-06 55.1 94 37.2
HanXRQChr04g0099691 Helianthus annuus HOM05D000071 ORTHO05D000029 7.9e-06 55.1 69 43.5
Lj5g0012313 Lotus japonicus HOM05D000071 ORTHO05D000029 7.9e-06 55.1 52 44.2
MBI04_g21137_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 7.9e-06 55.1 69 40.6
Medtr0087s0020 Medicago truncatula HOM05D000071 ORTHO05D000029 7.9e-06 55.1 68 42.6
Nitab4.5_0005104g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.9e-06 55.1 66 40.9
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.9e-06 55.1 70 41.4
Oeu042419.1 Olea europaea HOM05D000071 ORTHO05D000029 7.9e-06 55.1 55 45.5
Oeu059690.1 Olea europaea HOM05D000071 ORTHO05D000029 7.9e-06 55.1 55 45.5
RcHm_v2.0_Chr7g0208831 Rosa chinensis HOM05D000071 ORTHO05D000029 7.9e-06 55.1 72 36.1
SEGI_06263 Sequoiadendron giganteum HOM05D000620 ORTHO05D000537 7.9e-06 55.1 97 32.0


User provided reference genes

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