Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01534 Sequoiadendron giganteum HOM05D004403 ORTHO05D037589 1.5e-103 379.4 177 100.0
SEGI_35082 Sequoiadendron giganteum HOM05D004403 ORTHO05D037589 1.5e-103 379.4 177 100.0
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 4.0e-32 142.1 79 77.2
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 2.0e-31 139.8 79 74.7
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 2.0e-31 139.8 79 74.7
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 2.0e-31 139.8 79 75.9
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 3.4e-31 139.0 97 63.9
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 4.5e-31 138.7 79 74.7
TAR375G0129 Trochodendron aralioides HOM05D004403 ORTHO05D006164 5.8e-31 138.3 82 72.0
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 9.9e-31 137.5 79 73.4
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 9.9e-31 137.5 103 60.2
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 1.7e-30 136.7 79 73.4
Cpa.g.sc3.264 Carica papaya HOM05D004403 ORTHO05D006164 2.2e-30 136.3 77 74.0
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 2.2e-30 136.3 79 73.4
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 2.2e-30 136.3 79 73.4
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 2.2e-30 136.3 79 73.4
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 72.2
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 70.9
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 70.9
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 70.9
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 73.4
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 73.4
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 72.2
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 2.9e-30 136.0 79 73.4
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 3.8e-30 135.6 79 69.6
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 3.8e-30 135.6 79 73.4
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.8e-30 135.6 79 70.9
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.8e-30 135.6 79 70.9
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 4.9e-30 135.2 79 73.4
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 4.9e-30 135.2 79 70.9
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 4.9e-30 135.2 79 72.2
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 6.4e-30 134.8 79 73.4
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 6.4e-30 134.8 76 76.3
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 6.4e-30 134.8 106 61.3
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 6.4e-30 134.8 79 72.2
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 1.1e-29 134.0 79 70.9
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.4e-29 133.7 79 69.6
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.4e-29 133.7 79 69.6
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 1.9e-29 133.3 79 74.7
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 1.9e-29 133.3 79 70.9
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 1.9e-29 133.3 79 70.9
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 70.9
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 72.2
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 72.2
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 70.9
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 70.9
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 2.4e-29 132.9 79 72.2
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 3.2e-29 132.5 79 70.9
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 4.2e-29 132.1 79 70.9
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 4.2e-29 132.1 79 70.9
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 4.2e-29 132.1 79 70.9
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 4.2e-29 132.1 101 61.4
Psat1g115160 Pisum sativum HOM05D004403 ORTHO05D006164 4.2e-29 132.1 79 69.6
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 4.2e-29 132.1 79 69.6
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 5.4e-29 131.7 79 72.2
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 5.4e-29 131.7 79 72.2
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 5.4e-29 131.7 100 58.0
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 5.4e-29 131.7 79 72.2
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 5.4e-29 131.7 79 72.2
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 7.1e-29 131.3 79 68.4
HPP92_003527 Vanilla planifolia HOM05D004403 ORTHO05D006164 7.1e-29 131.3 75 72.0
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 9.3e-29 131.0 79 72.2
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 9.3e-29 131.0 75 77.3
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 9.3e-29 131.0 79 68.4
Dinv22934 Davidia involucrata HOM05D004403 ORTHO05D006164 1.2e-28 130.6 79 70.9
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 1.2e-28 130.6 79 70.9
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 1.2e-28 130.6 79 70.9
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 2.1e-28 129.8 79 70.9
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 2.7e-28 129.4 79 70.9
CARHR264430 Cardamine hirsuta HOM05D004403 ORTHO05D006164 3.5e-28 129.0 76 71.1
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 3.5e-28 129.0 77 72.7
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 3.5e-28 129.0 88 65.9
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 3.5e-28 129.0 82 68.3
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 4.6e-28 128.6 110 54.5
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 4.6e-28 128.6 76 71.1
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 4.6e-28 128.6 77 72.7
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 4.6e-28 128.6 79 72.2
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 4.6e-28 128.6 79 69.6
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 4.6e-28 128.6 77 68.8
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 6.0e-28 128.3 76 71.1
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 6.0e-28 128.3 79 69.6
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 69.7
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 1.0e-27 127.5 80 71.2
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 1.0e-27 127.5 76 71.1
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.3e-27 127.1 76 71.1
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 1.3e-27 127.1 76 69.7
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 5.1e-27 125.2 76 68.4
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 3.3e-26 122.5 79 65.8
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 3.3e-26 122.5 79 69.6
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 3.3e-26 122.5 99 56.6
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 1.6e-25 120.2 77 67.5
Thecc.05G208700 Theobroma cacao HOM05D004403 ORTHO05D037589 6.2e-25 118.2 79 64.6
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 1.8e-24 116.7 74 66.2
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 3.4e-23 112.5 77 61.0
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 1.0e-22 110.9 78 61.5
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.6e-20 103.6 125 49.6
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 7.4e-18 94.7 101 49.5
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.5e-15 87.0 128 41.4
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 1.0e-14 84.3 49 73.5
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 2.9e-14 82.8 73 49.3
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 3.8e-14 82.4 78 51.3
Cre13.g573450 Chlamydomonas reinhardtii HOM05D004403 ORTHO05D006164 1.1e-08 64.3 73 39.7
CDE12G0834 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 1.7e-06 57.0 31 77.4


User provided reference genes

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