Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34724 Sequoiadendron giganteum HOM05D003197 ORTHO05D003769 5.0e-263 910.6 471 100.0
CDE12G0403 Ceratophyllum demersum HOM05D003197 ORTHO05D003769 1.1e-41 175.3 98 88.8
TAR636G2764 Trochodendron aralioides HOM05D003197 ORTHO05D003769 4.3e-41 173.3 99 87.9
GSVIVG01031185001 Vitis vinifera HOM05D003197 ORTHO05D003769 5.7e-41 172.9 98 87.8
PSO731G0008 Papaver somniferum HOM05D003197 ORTHO05D003769 1.3e-40 171.8 98 85.7
PSO764G0236 Papaver somniferum HOM05D003197 ORTHO05D003769 1.3e-40 171.8 98 85.7
Ah.08g213570 Amaranthus hybridus HOM05D003197 ORTHO05D003769 2.2e-40 171.0 98 86.7
Aqoxy2G02869 Aquilegia oxysepala HOM05D003197 ORTHO05D003769 2.2e-40 171.0 98 86.7
Nn3g21574 Nelumbo nucifera HOM05D003197 ORTHO05D003769 2.2e-40 171.0 98 86.7
CsaV3_4G001010 Cucumis sativus L. HOM05D003197 ORTHO05D003769 2.8e-40 170.6 98 86.7
Phvul.007G217700 Phaseolus vulgaris HOM05D003197 ORTHO05D003769 2.8e-40 170.6 98 86.7
TAR365G0397 Trochodendron aralioides HOM05D003197 ORTHO05D003769 2.8e-40 170.6 98 87.8
Dinv10044 Davidia involucrata HOM05D003197 ORTHO05D003769 3.7e-40 170.2 98 86.7
Nn4g25715 Nelumbo nucifera HOM05D003197 ORTHO05D003769 3.7e-40 170.2 98 87.8
Hund05454 Selenicereus undatus HOM05D003197 ORTHO05D003769 3.7e-40 170.2 98 85.7
HPP92_013736 Vanilla planifolia HOM05D003197 ORTHO05D003769 3.7e-40 170.2 98 85.7
MELO3C017938.2 Cucumis melo HOM05D003197 ORTHO05D003769 4.8e-40 169.9 98 86.7
Cpa.g.sc27.118 Carica papaya HOM05D003197 ORTHO05D003769 6.3e-40 169.5 98 85.7
Lalb_Chr21g0309351 Lupinus albus HOM05D003197 ORTHO05D003769 6.3e-40 169.5 98 85.7
Psat6g163680 Pisum sativum HOM05D003197 ORTHO05D003769 1.1e-39 168.7 98 84.7
QL12p027709 Quercus lobata HOM05D003197 ORTHO05D003769 1.1e-39 168.7 98 85.7
COL.COLO4_23299 Corchorus olitorius HOM05D003197 ORTHO05D003769 1.4e-39 168.3 98 85.7
Haze_04982 Corylus avellana HOM05D003197 ORTHO05D003769 1.4e-39 168.3 98 84.7
Dinv33079 Davidia involucrata HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Gohir.A07G126400 Gossypium hirsutum HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Gohir.D07G130500 Gossypium hirsutum HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Gohir.D13G125000 Gossypium hirsutum HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Gorai.001G141300 Gossypium raimondii HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Lj5g0001576 Lotus japonicus HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Sed0011546 Sechium edule HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
Thecc.01G306500 Theobroma cacao HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 84.7
GSVIVG01028056001 Vitis vinifera HOM05D003197 ORTHO05D003769 1.8e-39 167.9 98 85.7
ATR0796G113 Amborella trichopoda HOM05D003197 ORTHO05D003769 2.4e-39 167.5 98 85.7
CANSAT80G1297 Cannabis sativa HOM05D003197 ORTHO05D003769 2.4e-39 167.5 98 83.7
Ciclev10019838m.g Citrus clementina HOM05D003197 ORTHO05D003769 2.4e-39 167.5 98 84.7
CiPaw.07G112700 Carya illinoinensis HOM05D003197 ORTHO05D003769 3.1e-39 167.2 98 83.7
ClCG10G011140 Citrullus lanatus HOM05D003197 ORTHO05D003769 3.1e-39 167.2 98 84.7
Phvul.007G217600 Phaseolus vulgaris HOM05D003197 ORTHO05D003769 3.1e-39 167.2 98 83.7
THA.LOC104802185 Tarenaya hassleriana HOM05D003197 ORTHO05D003769 3.1e-39 167.2 98 82.7
VMungo0720G1283 Vigna mungo HOM05D003197 ORTHO05D003769 3.1e-39 167.2 98 83.7
Cpa.g.sc151.34 Carica papaya HOM05D003197 ORTHO05D003769 4.1e-39 166.8 98 83.7
Cfa005865 Carpinus fangiana HOM05D003197 ORTHO05D003769 4.1e-39 166.8 98 83.7
Medtr1g087900 Medicago truncatula HOM05D003197 ORTHO05D003769 4.1e-39 166.8 98 83.7
Nitab4.5_0000116g0300 Nicotiana tabacum HOM05D003197 ORTHO05D003769 4.1e-39 166.8 98 82.7
Nitab4.5_0000803g0020 Nicotiana tabacum HOM05D003197 ORTHO05D003769 4.1e-39 166.8 98 82.7
arahy.Tifrunner.gnm1.ann1.5H6FCE Arachis hypogaea HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 83.7
arahy.Tifrunner.gnm1.ann1.BU45MS Arachis hypogaea HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 83.7
CSS0002671 Camellia sinensis var. sinensis HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 82.7
CSS0038182 Camellia sinensis var. sinensis HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 82.7
Os03g0337900 Oryza sativa ssp. japonica HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 82.7
PGR119G1313 Punica granatum HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 83.7
VMungo0720G0285 Vigna mungo HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 82.7
Zm00001eb016240 Zea mays HOM05D003197 ORTHO05D003769 5.3e-39 166.4 98 81.6
Cc01_g21120 Coffea canephora HOM05D003197 ORTHO05D003769 6.9e-39 166.0 98 83.7
Nitab4.5_0009662g0010 Nicotiana tabacum HOM05D003197 ORTHO05D003769 6.9e-39 166.0 98 81.6
Sc05g0003520 Simmondsia chinensis HOM05D003197 ORTHO05D003769 6.9e-39 166.0 98 84.7
CAN.G1280.13 Capsicum annuum HOM05D003197 ORTHO05D003769 9.1e-39 165.6 98 83.7
Rhsim13G0008000 Rhododendron simsii HOM05D003197 ORTHO05D003769 9.1e-39 165.6 98 81.6
Solyc06g009840.3 Solanum lycopersicum HOM05D003197 ORTHO05D003769 9.1e-39 165.6 98 82.7
CAN.G862.60 Capsicum annuum HOM05D003197 ORTHO05D003769 1.2e-38 165.2 98 82.7
Nitab4.5_0007413g0010 Nicotiana tabacum HOM05D003197 ORTHO05D003769 1.2e-38 165.2 98 81.6
Peaxi162Scf00362g01196 Petunia axillaris HOM05D003197 ORTHO05D003769 1.2e-38 165.2 98 82.7
Atru.chr6.1651 Acer truncatum HOM05D003197 ORTHO05D003769 1.5e-38 164.9 98 81.6
Ca_10314_v3 Cicer arietinum L. HOM05D003197 ORTHO05D003769 1.5e-38 164.9 98 83.7
Lalb_Chr02g0146531 Lupinus albus HOM05D003197 ORTHO05D003769 1.5e-38 164.9 98 83.7
CARHR142910 Cardamine hirsuta HOM05D003197 ORTHO05D003769 2.0e-38 164.5 98 81.6
Carub.0008s1096 Capsella rubella HOM05D003197 ORTHO05D003769 2.6e-38 164.1 99 79.8
Duzib138G1374 Durio zibethinus HOM05D003197 ORTHO05D003769 2.6e-38 164.1 98 83.7
FvH4_2g26140 Fragaria vesca HOM05D003197 ORTHO05D003769 2.6e-38 164.1 98 82.7
Potri.002G201300 Populus trichocarpa HOM05D003197 ORTHO05D003769 2.6e-38 164.1 98 82.7
RcHm_v2.0_Chr6g0294521 Rosa chinensis HOM05D003197 ORTHO05D003769 2.6e-38 164.1 98 82.7
FvH4_2g26121 Fragaria vesca HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 82.7
Glyma.02G015800 Glycine max HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 81.6
Manes.01G223200 Manihot esculenta HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 83.7
Rhsim07G0104500 Rhododendron simsii HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 80.6
Sabra02G0157600 Salix brachista HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 82.7
SGA_v2.0_scaffold334G49028 Striga asiatica HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 83.7
TPR.G33977 Trifolium pratense HOM05D003197 ORTHO05D003769 3.4e-38 163.7 98 82.7
Thhalv10001422m.g Eutrema salsugineum HOM05D003197 ORTHO05D003769 4.5e-38 163.3 98 80.6
Glyma.02G015700 Glycine max HOM05D003197 ORTHO05D003769 4.5e-38 163.3 98 81.6
Glyma.10G016200 Glycine max HOM05D003197 ORTHO05D003769 4.5e-38 163.3 98 81.6
Aa31LG1G28820 Aethionema arabicum HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
BcaC02g06979 Brassica carinata HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
BcaC02g12803 Brassica carinata HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
A04p34960 Brassica napus HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
A05p00410 Brassica napus HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
C04p00340 Brassica napus HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
C04p72860 Brassica napus HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
BolC4t21676H Brassica oleracea HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
BolC4t28767H Brassica oleracea HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
Carub.0004s3025 Capsella rubella HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
Manes.03G058700 Manihot esculenta HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 82.7
Manes.05G000300 Manihot esculenta HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 82.7
Sp4g29450 Schrenkiella parvula HOM05D003197 ORTHO05D003769 5.9e-38 162.9 98 80.6
AUR62008718 Chenopodium quinoa HOM05D003197 ORTHO05D003769 7.7e-38 162.5 100 83.0
Hma1.2p1_0494F.1_g165490 Hydrangea macrophylla HOM05D003197 ORTHO05D003769 7.7e-38 162.5 98 80.6
AL4G47080 Arabidopsis lyrata HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 80.6
AT2G47510 Arabidopsis thaliana HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 80.6
Gorai.013G139800 Gossypium raimondii HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 82.7
Lj5A370G55 Lonicera japonica HOM05D003197 ORTHO05D003769 1.0e-37 162.2 99 81.8
SGA_v2.0_scaffold2G01379 Striga asiatica HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 82.7
TWI23G1200 Tripterygium wilfordii HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 81.6
TWI59G0305 Tripterygium wilfordii HOM05D003197 ORTHO05D003769 1.0e-37 162.2 98 81.6
BcaB02g08764 Brassica carinata HOM05D003197 ORTHO05D003769 1.3e-37 161.8 98 79.6
BcaB06g29441 Brassica carinata HOM05D003197 ORTHO05D003769 1.3e-37 161.8 98 79.6
Eucgr.H01081 Eucalyptus grandis HOM05D003197 ORTHO05D003769 1.3e-37 161.8 98 79.6
MD00G1140200 Malus domestica HOM05D003197 ORTHO05D003769 1.7e-37 161.4 98 81.6
Solyc09g075450.3 Solanum lycopersicum HOM05D003197 ORTHO05D003769 1.7e-37 161.4 98 81.6
Sopen09g030240 Solanum pennellii HOM05D003197 ORTHO05D003769 1.7e-37 161.4 98 81.6
AT5G50950 Arabidopsis thaliana HOM05D003197 ORTHO05D003769 2.2e-37 161.0 98 78.6
unitig_22.g5232 Utricularia gibba HOM05D003197 ORTHO05D003769 2.2e-37 161.0 98 81.6
Oeu008339.1 Olea europaea HOM05D003197 ORTHO05D003769 3.8e-37 160.2 98 79.6
SalBow6G6079 Salvia bowleyana HOM05D003197 ORTHO05D003769 5.0e-37 159.8 98 81.6
MSTRG.18133 Avicennia marina HOM05D003197 ORTHO05D003769 6.5e-37 159.5 116 72.4
AagrBONN_evm.TU.Sc2ySwM_228.3677 Anthoceros agrestis HOM05D003197 ORTHO05D003769 8.5e-37 159.1 98 81.6
CBR_g26174 Chara braunii HOM05D003197 ORTHO05D003769 8.5e-37 159.1 98 80.6
Migut.D00123 Erythranthe guttata HOM05D003197 ORTHO05D003769 1.4e-36 158.3 98 81.6
Eucgr.H01083 Eucalyptus grandis HOM05D003197 ORTHO05D003769 1.4e-36 158.3 98 77.6
Gohir.D08G051600 Gossypium hirsutum HOM05D003197 ORTHO05D003769 1.4e-36 158.3 98 79.6
Gorai.004G051500 Gossypium raimondii HOM05D003197 ORTHO05D003769 1.4e-36 158.3 98 79.6
RcHm_v2.0_Chr6g0294511 Rosa chinensis HOM05D003197 ORTHO05D003769 1.4e-36 158.3 98 79.6
CARHR257280 Cardamine hirsuta HOM05D003197 ORTHO05D003769 1.9e-36 157.9 98 77.6
Glyma.05G065550 Glycine max HOM05D003197 ORTHO05D003769 1.9e-36 157.9 98 77.6
AL8G25140 Arabidopsis lyrata HOM05D003197 ORTHO05D003769 3.2e-36 157.1 98 76.5
Rhsim06G0161500 Rhododendron simsii HOM05D003197 ORTHO05D003769 4.2e-36 156.8 98 78.6
Gohir.A08G041500 Gossypium hirsutum HOM05D003197 ORTHO05D003769 5.5e-36 156.4 98 78.6
MD03G1292300 Malus domestica HOM05D003197 ORTHO05D003769 5.5e-36 156.4 98 79.6
CSS0028216 Camellia sinensis var. sinensis HOM05D003197 ORTHO05D003769 7.2e-36 156.0 141 59.6
HanXRQChr06g0167721 Helianthus annuus HOM05D003197 ORTHO05D003769 7.2e-36 156.0 98 77.6
Lsat_1_v5_gn_8_164740 Lactuca sativa HOM05D003197 ORTHO05D003769 1.2e-35 155.2 98 77.6
ECA236G1793 Erigeron canadensis HOM05D003197 ORTHO05D003769 2.1e-35 154.5 98 76.5
HanXRQChr04g0114721 Helianthus annuus HOM05D003197 ORTHO05D003769 2.7e-35 154.1 98 76.5
BraA01t04618Z Brassica rapa HOM05D003197 ORTHO05D003769 1.0e-34 152.1 118 68.6
Mapoly0045s0064 Marchantia polymorpha HOM05D003197 ORTHO05D003769 1.8e-34 151.4 116 69.0
Hund12826 Selenicereus undatus HOM05D003197 ORTHO05D003769 1.8e-34 151.4 124 66.9
Pp3c23_19500 Physcomitrium patens HOM05D003197 ORTHO05D003769 5.1e-34 149.8 98 76.5
Pp3c20_7140 Physcomitrium patens HOM05D003197 ORTHO05D003769 1.1e-33 148.7 98 75.5
PRCOL_00002149 Prasinoderma coloniale HOM05D003197 ORTHO05D003769 1.5e-33 148.3 98 71.4
BNapus_Darmor_BZH_scaffold_99p00260 Brassica napus HOM05D003197 ORTHO05D003769 2.0e-33 147.9 98 76.5
FAN27G3019 Fragaria x ananassa HOM05D003197 ORTHO05D003769 2.8e-32 144.1 132 62.1
SMO197G0092 Selaginella moellendorffii HOM05D003197 ORTHO05D003769 2.8e-32 144.1 98 72.4
Peaxi162Scf00001g00341 Petunia axillaris HOM05D003197 ORTHO05D003769 1.4e-31 141.7 98 74.5
AagrBONN_evm.TU.Sc2ySwM_344.987 Anthoceros agrestis HOM05D003197 ORTHO05D003769 1.5e-30 138.3 116 62.9
FAN24G1606 Fragaria x ananassa HOM05D003197 ORTHO05D003769 5.9e-30 136.3 98 72.4
EL10Ac6g15230 Beta vulgaris HOM05D003197 ORTHO05D003769 3.8e-29 133.7 98 73.5
Haze_27469 Corylus avellana HOM05D003197 ORTHO05D003769 4.2e-28 130.2 98 66.3
BcaC09g47717 Brassica carinata HOM05D003197 ORTHO05D003769 6.1e-27 126.3 76 78.9
C04p00370 Brassica napus HOM05D003197 ORTHO05D000780 6.1e-27 126.3 76 78.9
Cre01.g020223 Chlamydomonas reinhardtii HOM05D003197 ORTHO05D003769 5.2e-26 123.2 98 63.3
Carub.0008s1097 Capsella rubella HOM05D003197 ORTHO05D003769 1.5e-25 121.7 99 64.6
MCO15G383 Micromonas commoda HOM05D003197 ORTHO05D003769 1.5e-25 121.7 99 65.7
QL02p103821 Quercus lobata HOM05D003197 ORTHO05D003769 1.8e-23 114.8 76 73.7
Gorai.004G132900 Gossypium raimondii HOM05D003197 ORTHO05D003769 2.4e-23 114.4 66 83.3
PRCOL_00000918 Prasinoderma coloniale HOM05D003197 ORTHO05D003769 3.1e-23 114.0 99 61.6
Cfa027230 Carpinus fangiana HOM05D003197 ORTHO05D003769 4.1e-23 113.6 98 58.2
BolC4t21675H Brassica oleracea HOM05D003197 ORTHO05D003769 2.0e-22 111.3 98 61.2
BolC4t21682H Brassica oleracea HOM05D003197 ORTHO05D000780 3.5e-22 110.5 70 72.9
BcaC09g47718 Brassica carinata HOM05D003197 ORTHO05D003769 5.9e-22 109.8 78 66.7
BcaC09g47716 Brassica carinata HOM05D003197 ORTHO05D003769 7.7e-22 109.4 66 77.3
CiPaw.08G092800 Carya illinoinensis HOM05D003197 ORTHO05D003769 1.0e-21 109.0 99 62.6
Actinidia21430 Actinidia chinensis HOM05D003197 ORTHO05D003769 1.3e-21 108.6 63 82.5
FAN20G1625 Fragaria x ananassa HOM05D003197 ORTHO05D003769 2.9e-21 107.5 72 75.0
AUR62025515 Chenopodium quinoa HOM05D003197 ORTHO05D003769 4.2e-20 103.6 98 60.2
Rhsim06G0161700 Rhododendron simsii HOM05D003197 ORTHO05D003769 4.0e-18 97.1 98 57.1
Dinv24406 Davidia involucrata HOM05D003197 ORTHO05D003769 1.2e-17 95.5 87 60.9
Nitab4.5_0000448g0140 Nicotiana tabacum HOM05D000768 ORTHO05D003769 2.0e-17 94.7 113 48.7
Duzib211G0223 Durio zibethinus HOM05D003197 ORTHO05D003769 5.0e-13 80.1 98 50.0
Atru.chr5.1084 Acer truncatum HOM05D003197 ORTHO05D003769 1.5e-12 78.6 70 60.0
Prupe.8G265300 Prunus persica HOM05D003197 ORTHO05D003769 7.2e-12 76.3 98 46.9
MCO04G254 Micromonas commoda HOM05D003197 ORTHO05D003769 1.3e-08 65.5 94 37.2
vmacro09123 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 3.1e-07 60.8 38 68.4
vmacro22986 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 3.1e-07 60.8 38 68.4
MBI18_g04559_MAGBIO Magnolia biondii HOM05D004772 ORTHO05D006892 7.0e-07 59.7 35 82.9
Glyma.11G155200 Glycine max HOM05D003197 ORTHO05D003769 3.5e-06 57.4 33 75.8


User provided reference genes

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