Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34415 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 1.1e-84 316.6 169 100.0
SEGI_17244 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 2.1e-22 109.8 67 85.1
SEGI_15828 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 4.7e-22 108.6 68 89.7
SEGI_38030 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 1.5e-20 103.6 67 89.6
SEGI_07197 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 7.8e-17 91.3 66 69.7
SEGI_19243 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 1.0e-16 90.9 55 80.0
BcaB03g14179 Brassica carinata HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
BcaB07g32287 Brassica carinata HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
A07p14130 Brassica napus HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
BraA07t29171Z Brassica rapa HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
Carub.0001s2242 Capsella rubella HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
Thhalv10008042m.g Eutrema salsugineum HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
Sp1g20380 Schrenkiella parvula HOM05D004161 ORTHO05D005770 1.7e-16 90.1 55 80.0
Pp3c18_17430 Physcomitrium patens HOM05D004161 ORTHO05D005770 3.0e-16 89.4 55 76.4
SEGI_04925 Sequoiadendron giganteum HOM05D008257 ORTHO05D385434 3.0e-16 89.4 57 80.7
SalBow4G1531 Salvia bowleyana HOM05D004161 ORTHO05D005770 3.9e-16 89.0 55 78.2
AL1G36480 Arabidopsis lyrata HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
BcaC05g26198 Brassica carinata HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
A09p41820 Brassica napus HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
C05p22060 Brassica napus HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
BolC5t30902H Brassica oleracea HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
BraA09t39671Z Brassica rapa HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
CARHR023300 Cardamine hirsuta HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 78.2
Duzib187G0390 Durio zibethinus HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 76.4
MBI16_g31792_MAGBIO Magnolia biondii HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 76.4
Sabra18G0014200 Salix brachista HOM05D004161 ORTHO05D005770 5.1e-16 88.6 55 76.4
Hma1.2p1_0432F.1_g151800 Hydrangea macrophylla HOM05D004161 ORTHO05D005770 6.6e-16 88.2 55 76.4
Mapoly0006s0112 Marchantia polymorpha HOM05D004161 ORTHO05D005770 6.6e-16 88.2 55 74.5
Pp3c21_1460 Physcomitrium patens HOM05D004161 ORTHO05D005770 6.6e-16 88.2 55 74.5
THA.LOC104821862 Tarenaya hassleriana HOM05D004161 ORTHO05D005770 6.6e-16 88.2 55 76.4
AT1G71230 Arabidopsis thaliana HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 78.2
CAN.G65.161 Capsicum annuum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Cpa.g.sc23.7 Carica papaya HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
HanXRQChr17g0533271 Helianthus annuus HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
MD15G1108500 Malus domestica HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Nitab4.5_0001586g0240 Nicotiana tabacum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Nitab4.5_0002553g0070 Nicotiana tabacum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Peaxi162Scf00180g00518 Petunia axillaris HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Rhsim11G0155000 Rhododendron simsii HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
RhsimUnG0126200 Rhododendron simsii HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
RcHm_v2.0_Chr6g0304891 Rosa chinensis HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
SalBow8G4837 Salvia bowleyana HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Solyc06g073150.3 Solanum lycopersicum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Solyc11g017300.2 Solanum lycopersicum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Sopen06g029500 Solanum pennellii HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
Sopen11g009190 Solanum pennellii HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
PGSC0003DMG400009240 Solanum tuberosum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
PGSC0003DMG400026918 Solanum tuberosum HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
vmacro01979 Vaccinium macrocarpon HOM05D004161 ORTHO05D005770 8.6e-16 87.8 55 76.4
AagrBONN_evm.TU.Sc2ySwM_117.740 Anthoceros agrestis HOM05D004161 ORTHO05D005770 1.1e-15 87.4 55 76.4
AT1G22920 Arabidopsis thaliana HOM05D004161 ORTHO05D005770 1.1e-15 87.4 55 76.4
Actinidia34376 Actinidia chinensis HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 76.4
CDE03G0096 Ceratophyllum demersum HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
CDE04G3237 Ceratophyllum demersum HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
Lalb_Chr23g0269071 Lupinus albus HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
Potri.006G275100 Populus trichocarpa HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
Potri.018G006100 Populus trichocarpa HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
PGR142G1061 Punica granatum HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
Sabra06G0212900 Salix brachista HOM05D004161 ORTHO05D005770 1.5e-15 87.0 55 74.5
Atru.chr7.2634 Acer truncatum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Actinidia00392 Actinidia chinensis HOM05D004161 ORTHO05D015225 1.9e-15 86.7 55 74.5
Aa31LG4G9280 Aethionema arabicum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 114 48.2
Ah.11g043770 Amaranthus hybridus HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
AL2G30840 Arabidopsis lyrata HOM05D004161 ORTHO05D005770 1.9e-15 86.7 114 48.2
MSTRG.13941 Avicennia marina HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
EL10Ac2g03746 Beta vulgaris HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
CSS0014609 Camellia sinensis var. sinensis HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
CANSAT25G1154 Cannabis sativa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Cfa013264 Carpinus fangiana HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
CiPaw.07G213300 Carya illinoinensis HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
CiPaw.08G019300 Carya illinoinensis HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
AUR62009062 Chenopodium quinoa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
AUR62020608 Chenopodium quinoa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Ca_15670_v3 Cicer arietinum L. HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
ClCG08G012710 Citrullus lanatus HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Ciclev10008736m.g Citrus clementina HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
COL.COLO4_19041 Corchorus olitorius HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Haze_21728 Corylus avellana HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
MELO3C011193.2 Cucumis melo HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
CsaV3_2G031440 Cucumis sativus L. HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
DCAR_027524 Daucus carota HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Dinv10170 Davidia involucrata HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Duzib168G1137 Durio zibethinus HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Migut.E01406 Erythranthe guttata HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Eucgr.C02093 Eucalyptus grandis HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Thhalv10018788m.g Eutrema salsugineum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 114 48.2
FvH4_2g36890 Fragaria vesca HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
FAN15G1150 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
FAN20G0045 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
FAN27G0727 Fragaria x ananassa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Gohir.A05G064800 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Gohir.D05G067400 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Gorai.009G068200 Gossypium raimondii HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Lsat_1_v5_gn_3_9100 Lactuca sativa HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Lj7C749T8 Lonicera japonica HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Lj1g0012076 Lotus japonicus HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
MD08G1130400 Malus domestica HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Manes.03G003400 Manihot esculenta HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Medtr3g108790 Medicago truncatula HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Nn2g12726 Nelumbo nucifera HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Oeu019278.1 Olea europaea HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Psat5g024160 Pisum sativum HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Prupe.1G460800 Prunus persica HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
QL12p025061 Quercus lobata HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Sed0011095 Sechium edule HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Sed0017284 Sechium edule HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
SGA_v2.0_scaffold121G33036 Striga asiatica HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
SGA_v2.0_scaffold169G38590 Striga asiatica HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Thecc.09G006500 Theobroma cacao HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
TPR.G12320 Trifolium pratense HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
TWI32G1088 Tripterygium wilfordii HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
TWI34G1526 Tripterygium wilfordii HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
TAR626G0400 Trochodendron aralioides HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
unitig_0.g2820 Utricularia gibba HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
unitig_747.g21902 Utricularia gibba HOM05D004161 ORTHO05D005770 1.9e-15 86.7 55 74.5
Glyma.04G075000 Glycine max HOM05D004161 ORTHO05D005770 2.5e-15 86.3 55 74.5
Glyma.06G076000 Glycine max HOM05D004161 ORTHO05D005770 2.5e-15 86.3 55 74.5
Lalb_Chr08g0243601 Lupinus albus HOM05D004161 ORTHO05D005770 2.5e-15 86.3 55 74.5
Phvul.009G100700 Phaseolus vulgaris HOM05D004161 ORTHO05D005770 2.5e-15 86.3 55 74.5
VMungo1309G2307 Vigna mungo HOM05D004161 ORTHO05D005770 2.5e-15 86.3 55 74.5
ATR0580G326 Amborella trichopoda HOM05D004161 ORTHO05D005770 3.3e-15 85.9 55 74.5
PSO063G1389 Papaver somniferum HOM05D004161 ORTHO05D005770 3.3e-15 85.9 55 74.5
PSO170G5806 Papaver somniferum HOM05D004161 ORTHO05D005770 3.3e-15 85.9 55 74.5
Aqoxy7G02966 Aquilegia oxysepala HOM05D004161 ORTHO05D005770 5.6e-15 85.1 55 74.5
CARHR064530 Cardamine hirsuta HOM05D004161 ORTHO05D005770 5.6e-15 85.1 114 47.4
Hund03286 Selenicereus undatus HOM05D004161 ORTHO05D005770 5.6e-15 85.1 55 72.7
Manes.16G136100 Manihot esculenta HOM05D004161 ORTHO05D005770 7.3e-15 84.7 55 72.7
Sc09g0010220 Simmondsia chinensis HOM05D004161 ORTHO05D005770 7.3e-15 84.7 55 72.7
Carub.0002s1811 Capsella rubella HOM05D004161 ORTHO05D005770 9.5e-15 84.3 114 47.4
ECA246G1306 Erigeron canadensis HOM05D004161 ORTHO05D005770 9.5e-15 84.3 55 72.7
SEGI_00993 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 9.5e-15 84.3 51 78.4
SEGI_07706 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 9.5e-15 84.3 51 78.4
SEGI_26497 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 9.5e-15 84.3 52 76.9
SEGI_27379 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 9.5e-15 84.3 52 76.9
SEGI_34575 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 9.5e-15 84.3 52 76.9
arahy.Tifrunner.gnm1.ann1.T9YY8P Arachis hypogaea HOM05D004161 ORTHO05D005770 1.6e-14 83.6 55 72.7
Gohir.D06G108400 Gossypium hirsutum HOM05D004161 ORTHO05D005770 1.6e-14 83.6 55 72.7
Gohir.A06G106200 Gossypium hirsutum HOM05D004161 ORTHO05D005770 2.1e-14 83.2 55 72.7
Os04g0654700 Oryza sativa ssp. japonica HOM05D004161 ORTHO05D005770 2.1e-14 83.2 55 72.7
SEGI_18983 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 2.1e-14 83.2 52 75.0
HPP92_017054 Vanilla planifolia HOM05D004161 ORTHO05D005770 2.1e-14 83.2 55 70.9
Sp5g26420 Schrenkiella parvula HOM05D004161 ORTHO05D005770 2.8e-14 82.8 114 46.5
SEGI_36627 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 3.6e-14 82.4 55 76.4
SMO367G0024 Selaginella moellendorffii HOM05D004161 ORTHO05D005770 6.2e-14 81.6 55 67.3
Zm00001eb068020 Zea mays HOM05D004161 ORTHO05D005770 6.2e-14 81.6 55 69.1
arahy.Tifrunner.gnm1.ann1.DD3LGG Arachis hypogaea HOM05D004161 ORTHO05D005770 1.1e-13 80.9 55 70.9
Gorai.010G123100 Gossypium raimondii HOM05D004161 ORTHO05D005770 1.8e-13 80.1 55 69.1
SEGI_07498 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 1.8e-13 80.1 54 72.2
SEGI_33566 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 2.3e-13 79.7 56 73.2
SEGI_41384 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 6.8e-13 78.2 50 78.0
Oeu018399.2 Olea europaea HOM05D004161 ORTHO05D005770 2.0e-12 76.6 72 54.2
SEGI_05792 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 2.6e-12 76.3 54 75.9
Cre09.g399178 Chlamydomonas reinhardtii HOM05D004161 ORTHO05D005770 1.1e-10 70.9 52 59.6
Gorai.001G001700 Gossypium raimondii HOM05D004161 ORTHO05D005770 1.1e-10 70.9 53 66.0
MCO01G347 Micromonas commoda HOM05D004161 ORTHO05D005770 1.9e-10 70.1 55 58.2
Haze_26449 Corylus avellana HOM05D004161 ORTHO05D005770 5.4e-10 68.6 53 58.5
PRCOL_00006125 Prasinoderma coloniale HOM05D004161 ORTHO05D005770 4.6e-09 65.5 55 54.5
SEGI_08414 Sequoiadendron giganteum HOM05D000070 ORTHO05D003190 6.0e-09 65.1 38 84.2
CSS0034864 Camellia sinensis var. sinensis HOM05D004161 ORTHO05D005770 5.1e-08 62.0 46 63.0
HPP92_010234 Vanilla planifolia HOM05D004161 ORTHO05D015225 6.6e-08 61.6 42 66.7
Cfa022118 Carpinus fangiana HOM05D004161 ORTHO05D005770 3.3e-07 59.3 55 52.7
SEGI_09689 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 4.3e-07 58.9 36 100.0
SEGI_38896 Sequoiadendron giganteum HOM05D004161 ORTHO05D005770 4.3e-07 58.9 38 73.7
SEGI_41045 Sequoiadendron giganteum HOM05D008257 ORTHO05D010546 1.6e-06 57.0 37 94.6


User provided reference genes

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