Gene: Solyc11g017300.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g017300.2
  • Transcript Identifier Solyc11g017300.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 8261422-8266338 : negative

Gene Family Information

  • ID HOM05D004161
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g017300.2.1
  • uniprot A0A3Q7IT42
  • gene_id Solyc11g017300

Descriptions

  • Description JAB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010971
ISO
PLAZA Integrative Orthologypositive regulation of G2/M transition of mitotic cell cycle AT1G71230
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G71230
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT1G71230
GO:0031347
ISO
PLAZA Integrative Orthologyregulation of defense response AT1G22920
GO:0010387
ISO
PLAZA Integrative OrthologyCOP9 signalosome assembly AT1G71230
GO:0045732
ISO
PLAZA Integrative Orthologypositive regulation of protein catabolic process AT1G71230
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT1G22920
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G71230
GO:1990641
ISO
PLAZA Integrative Orthologyresponse to iron ion starvation Os04g0654700
GO:2000082
ISO
PLAZA Integrative Orthologyregulation of L-ascorbic acid biosynthetic process AT1G71230
GO:0000338
IBA
GOA Databaseprotein deneddylation
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008237
IBA
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0019784
IBA
GOA DatabaseNEDD8-specific protease activity
GO:0005515
IEA
InterProprotein binding
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0070122
IEA
GOA Databaseisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0008180
IBA
IEA
GOA DatabaseCOP9 signalosome
GO:0008180
IEA
InterProCOP9 signalosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040961 Cop9 signalosome subunit 5 C-terminal domain
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR037740 COP9 signalosome complex subunit 5
Mapman id Description
19.2.3.3.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN5