Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34383 Sequoiadendron giganteum HOM05D001352 ORTHO05D386607 2.1e-82 308.9 150 100.0
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 3.2e-06 55.8 52 57.7
Os08g0156600 Oryza sativa ssp. japonica HOM05D001352 ORTHO05D001354 4.2e-06 55.5 31 74.2
SMO232G0100 Selaginella moellendorffii HOM05D001352 ORTHO05D001354 4.2e-06 55.5 31 74.2
HPP92_025602 Vanilla planifolia HOM05D001352 ORTHO05D001354 4.2e-06 55.5 31 74.2
arahy.Tifrunner.gnm1.ann1.5QUI8A Arachis hypogaea HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
arahy.Tifrunner.gnm1.ann1.DG4CQN Arachis hypogaea HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
CiPaw.04G060000 Carya illinoinensis HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
MELO3C005383.2 Cucumis melo HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
CsaV3_5G005700 Cucumis sativus L. HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Dinv06557 Davidia involucrata HOM05D001352 ORTHO05D006360 5.5e-06 55.1 31 71.0
Dinv22948 Davidia involucrata HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
ECA238G2838 Erigeron canadensis HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Eucgr.K00159 Eucalyptus grandis HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
HanXRQChr14g0461361 Helianthus annuus HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Lj3g0001480 Lotus japonicus HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Manes.14G035900 Manihot esculenta HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Os04g0555300 Oryza sativa ssp. japonica HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
PGR142G1126 Punica granatum HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Sed0006247 Sechium edule HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
SEGI_21219 Sequoiadendron giganteum HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
SEGI_29457 Sequoiadendron giganteum HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
TWI23G0588 Tripterygium wilfordii HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
TWI39G0666 Tripterygium wilfordii HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
TAR636G1729 Trochodendron aralioides HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
VMungo1127G0431 Vigna mungo HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
Zm00001eb172590 Zea mays HOM05D001352 ORTHO05D001354 5.5e-06 55.1 31 71.0
ClCG01G005470 Citrullus lanatus HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Ciclev10004728m.g Citrus clementina HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Glyma.09G223700 Glycine max HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Glyma.12G013200 Glycine max HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Hma1.2p1_0432F.1_g151720 Hydrangea macrophylla HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Lsat_1_v5_gn_9_52100 Lactuca sativa HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Lalb_Chr01g0000701 Lupinus albus HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
MD04G1051200 Malus domestica HOM05D001352 ORTHO05D247881 7.2e-06 54.7 36 61.1
PGR042G3127 Punica granatum HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
QL09p019900 Quercus lobata HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Sed0021433 Sechium edule HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
Zm00001eb429440 Zea mays HOM05D001352 ORTHO05D001354 7.2e-06 54.7 31 67.7
HanXRQChr07g0205921 Helianthus annuus HOM05D001352 ORTHO05D001354 9.4e-06 54.3 31 64.5
Phvul.011G016300 Phaseolus vulgaris HOM05D001352 ORTHO05D001354 9.4e-06 54.3 31 64.5
Zm00001eb415960 Zea mays HOM05D001352 ORTHO05D001354 9.4e-06 54.3 31 64.5


User provided reference genes

Program Settings