Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33831 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 7.1e-167 590.5 292 100.0
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 9.1e-106 387.5 190 96.3
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 1.5e-71 273.9 189 64.0
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.5e-71 273.1 189 65.1
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 1.2e-70 270.8 189 63.5
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 8.0e-70 268.1 189 64.0
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 2.3e-69 266.5 189 63.5
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.0e-68 263.5 189 63.5
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 9.8e-68 261.2 189 63.0
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 4.9e-67 258.8 189 61.9
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 1.4e-66 257.3 243 52.7
Haze_20157 Corylus avellana HOM05D004363 ORTHO05D005110 7.0e-66 255.0 189 61.9
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.2e-65 254.2 189 60.3
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 2.0e-65 253.4 189 58.7
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 1.3e-64 250.8 189 61.9
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 1.7e-64 250.4 189 59.8
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 1.7e-64 250.4 189 57.7
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 6.6e-64 248.4 189 59.8
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 1.1e-63 247.7 189 59.8
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.5e-63 247.3 189 59.8
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 2.5e-63 246.5 189 60.3
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 4.3e-63 245.7 189 59.8
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 5.6e-63 245.4 189 59.3
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 7.3e-63 245.0 189 59.3
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 1.6e-62 243.8 189 58.2
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.6e-62 243.8 189 57.7
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.6e-62 243.8 189 57.7
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 1.6e-62 243.8 189 58.7
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 2.8e-62 243.0 189 59.8
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 2.8e-62 243.0 189 58.7
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 2.8e-62 243.0 242 50.0
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 2.8e-62 243.0 189 57.7
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 3.6e-62 242.7 189 57.7
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.7e-62 242.3 189 57.1
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 4.7e-62 242.3 189 59.3
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 6.2e-62 241.9 196 57.1
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 6.2e-62 241.9 189 57.7
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 8.1e-62 241.5 191 56.0
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 8.1e-62 241.5 185 60.5
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 1.1e-61 241.1 189 58.2
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.4e-61 240.7 189 57.1
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 1.8e-61 240.4 192 57.8
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 5.2e-61 238.8 246 48.0
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 5.2e-61 238.8 189 57.7
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 6.8e-61 238.4 189 57.1
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 6.8e-61 238.4 243 48.1
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 6.8e-61 238.4 189 57.1
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 8.9e-61 238.0 189 56.6
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 8.9e-61 238.0 189 56.6
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 8.9e-61 238.0 243 47.3
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 1.2e-60 237.7 189 57.1
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 1.2e-60 237.7 242 48.8
Cpa.g.sc104.16 Carica papaya HOM05D004363 ORTHO05D005110 1.5e-60 237.3 187 57.8
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 1.5e-60 237.3 189 57.1
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 1.5e-60 237.3 242 47.9
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 2.0e-60 236.9 189 57.7
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 2.0e-60 236.9 189 57.1
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 2.6e-60 236.5 189 56.1
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.4e-60 236.1 189 55.0
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.4e-60 236.1 189 55.0
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 7.5e-60 235.0 189 58.7
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 9.8e-60 234.6 189 54.5
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 9.8e-60 234.6 189 57.1
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 1.3e-59 234.2 189 54.5
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.3e-59 234.2 189 54.5
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 1.3e-59 234.2 242 47.1
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 1.3e-59 234.2 242 47.1
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 1.7e-59 233.8 242 47.5
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 1.7e-59 233.8 189 56.6
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 1.7e-59 233.8 189 55.0
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 2.2e-59 233.4 189 55.6
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 2.2e-59 233.4 189 57.1
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.9e-59 233.0 189 55.6
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 2.9e-59 233.0 189 55.6
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 2.9e-59 233.0 189 55.6
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 3.7e-59 232.6 242 46.7
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 4.9e-59 232.3 189 57.1
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 4.9e-59 232.3 246 46.3
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 6.4e-59 231.9 188 56.4
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 6.4e-59 231.9 189 57.1
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 8.3e-59 231.5 189 55.6
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 8.3e-59 231.5 189 54.0
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 8.3e-59 231.5 189 56.1
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.1e-58 231.1 218 50.5
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 1.1e-58 231.1 189 55.0
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 1.9e-58 230.3 189 54.5
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.9e-58 230.3 188 55.9
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.9e-58 230.3 188 55.9
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 2.4e-58 229.9 189 56.6
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 5.4e-58 228.8 189 56.6
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 5.4e-58 228.8 189 56.6
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 7.1e-58 228.4 189 54.5
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 7.1e-58 228.4 189 54.5
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 7.1e-58 228.4 189 54.5
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 7.1e-58 228.4 189 54.5
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 9.2e-58 228.0 189 54.5
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 1.2e-57 227.6 189 54.5
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 1.2e-57 227.6 189 54.0
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 2.7e-57 226.5 189 53.4
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 2.7e-57 226.5 189 54.5
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 4.6e-57 225.7 194 52.6
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 6.0e-57 225.3 189 52.9
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 7.8e-57 224.9 189 56.1
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.0e-56 224.6 189 53.4
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.0e-56 224.6 189 54.5
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.0e-56 224.6 189 54.5
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 1.3e-56 224.2 189 52.9
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 3.0e-56 223.0 215 50.2
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 8.6e-56 221.5 189 53.4
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 9.5e-55 218.0 190 51.6
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 8.9e-53 211.5 192 53.1
Lj1A1055T62 Lonicera japonica HOM05D004363 ORTHO05D005110 2.6e-52 209.9 158 60.1
CSS0042424 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 9.9e-52 208.0 160 60.0
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 6.4e-51 205.3 241 44.8
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.7e-49 199.9 170 54.1
CSS0011588 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 2.5e-47 193.4 148 58.8
Cre01.g024400 Chlamydomonas reinhardtii HOM05D004363 ORTHO05D005110 2.8e-30 136.7 194 37.1
PRCOL_00001893 Prasinoderma coloniale HOM05D004363 ORTHO05D005110 7.6e-28 128.6 190 37.4
SHI08960 Sapria himalayana HOM05D004363 ORTHO05D005110 6.0e-25 119.0 175 38.3
MCO09G191 Micromonas commoda HOM05D004363 ORTHO05D005110 5.7e-15 85.9 196 32.1
arahy.Tifrunner.gnm1.ann1.BA6WS2 Arachis hypogaea HOM05D004363 ORTHO05D005110 5.3e-13 79.3 81 46.9
arahy.Tifrunner.gnm1.ann1.P34FZA Arachis hypogaea HOM05D004363 ORTHO05D005110 4.6e-09 66.2 52 51.9
SEGI_14939 Sequoiadendron giganteum HOM05D000029 ORTHO05D001072 3.0e-08 63.5 154 35.1
SEGI_37382 Sequoiadendron giganteum HOM05D000454 ORTHO05D000591 1.1e-07 61.6 61 59.0
SEGI_28850 Sequoiadendron giganteum HOM05D000768 ORTHO05D050187 1.9e-07 60.8 86 46.5
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 3.3e-07 60.1 42 66.7
SEGI_24464 Sequoiadendron giganteum HOM05D012660 ORTHO05D012113 1.6e-06 57.8 81 46.9
Actinidia03877 Actinidia chinensis HOM05D004363 ORTHO05D005110 3.7e-06 56.6 44 59.1
SEGI_38586 Sequoiadendron giganteum HOM05D012660 ORTHO05D012113 3.7e-06 56.6 60 53.3
SEGI_39024 Sequoiadendron giganteum HOM05D003441 ORTHO05D004516 6.3e-06 55.8 71 47.9


User provided reference genes

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