Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33825 Sequoiadendron giganteum HOM05D003133 ORTHO05D003642 3.0e-54 214.9 108 100.0
Hma1.2p1_0792F.1_g218580 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 1.9e-32 142.5 92 77.2
Hma1.2p1_2966F.1_g330980 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 1.9e-32 142.5 92 77.2
Phvul.002G289200 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 1.9e-32 142.5 89 79.8
Cpa.g.sc74.44 Carica papaya HOM05D003133 ORTHO05D003642 2.5e-32 142.1 89 78.7
Lj4g0013021 Lotus japonicus HOM05D003133 ORTHO05D003642 2.5e-32 142.1 89 78.7
QL12p033200 Quercus lobata HOM05D003133 ORTHO05D003642 3.2e-32 141.7 89 77.5
Glyma.08G014300 Glycine max HOM05D003133 ORTHO05D003642 4.2e-32 141.4 89 78.7
Haze_08845 Corylus avellana HOM05D003133 ORTHO05D003642 5.5e-32 141.0 89 77.5
arahy.Tifrunner.gnm1.ann1.W25JQA Arachis hypogaea HOM05D003133 ORTHO05D003642 1.2e-31 139.8 89 77.5
AUR62017210 Chenopodium quinoa HOM05D003133 ORTHO05D003642 1.2e-31 139.8 92 73.9
Cc08_g14690 Coffea canephora HOM05D003133 ORTHO05D003642 1.2e-31 139.8 89 76.4
Lalb_Chr09g0333371 Lupinus albus HOM05D003133 ORTHO05D003642 1.2e-31 139.8 89 77.5
Glyma.05G207600 Glycine max HOM05D003133 ORTHO05D003642 1.6e-31 139.4 89 77.5
Gohir.D09G186600 Gossypium hirsutum HOM05D003133 ORTHO05D003642 1.6e-31 139.4 89 76.4
Hund14791 Selenicereus undatus HOM05D003133 ORTHO05D003642 2.1e-31 139.0 89 75.3
Ah.12g056970 Amaranthus hybridus HOM05D003133 ORTHO05D003642 2.7e-31 138.7 92 73.9
arahy.Tifrunner.gnm1.ann1.WBB0SP Arachis hypogaea HOM05D003133 ORTHO05D003642 2.7e-31 138.7 89 76.4
Ca_17536_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 2.7e-31 138.7 89 76.4
COL.COLO4_34458 Corchorus olitorius HOM05D003133 ORTHO05D003642 2.7e-31 138.7 89 76.4
Gohir.A09G192401 Gossypium hirsutum HOM05D003133 ORTHO05D003642 2.7e-31 138.7 89 76.4
VMungo0251G3225 Vigna mungo HOM05D003133 ORTHO05D003642 2.7e-31 138.7 89 77.5
MSTRG.13837 Avicennia marina HOM05D003133 ORTHO05D003642 3.6e-31 138.3 92 73.9
Cfa012177 Carpinus fangiana HOM05D003133 ORTHO05D003642 3.6e-31 138.3 89 76.4
Lalb_Chr05g0224791 Lupinus albus HOM05D003133 ORTHO05D003642 3.6e-31 138.3 89 76.4
CANSAT21G0409 Cannabis sativa HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 75.3
Ciclev10019696m.g Citrus clementina HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
Lj2A192G38 Lonicera japonica HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 74.2
Lj8A228T23 Lonicera japonica HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
Lj8A232T62 Lonicera japonica HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
MD06G1082500 Malus domestica HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
Nn1g01499 Nelumbo nucifera HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 75.3
Psat7g033480 Pisum sativum HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
Sc22g0005610 Simmondsia chinensis HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 75.3
TPR.G12862 Trifolium pratense HOM05D003133 ORTHO05D003642 4.6e-31 137.9 89 76.4
ATR0810G035 Amborella trichopoda HOM05D003133 ORTHO05D003642 6.1e-31 137.5 89 73.0
EL10Ac5g13059 Beta vulgaris HOM05D003133 ORTHO05D003642 6.1e-31 137.5 92 73.9
GSVIVG01019757001 Vitis vinifera HOM05D003133 ORTHO05D003642 6.1e-31 137.5 92 75.0
CiPaw.12G093500 Carya illinoinensis HOM05D003133 ORTHO05D003642 7.9e-31 137.1 89 75.3
Manes.02G022200 Manihot esculenta HOM05D003133 ORTHO05D003642 7.9e-31 137.1 89 77.5
Medtr8g098350 Medicago truncatula HOM05D003133 ORTHO05D003642 7.9e-31 137.1 89 75.3
RcHm_v2.0_Chr7g0197771 Rosa chinensis HOM05D003133 ORTHO05D003642 1.0e-30 136.7 89 75.3
HanXRQChr17g0533681 Helianthus annuus HOM05D003133 ORTHO05D003642 1.4e-30 136.3 89 75.3
Actinidia14558 Actinidia chinensis HOM05D003133 ORTHO05D003642 1.8e-30 136.0 89 74.2
DCAR_004633 Daucus carota HOM05D003133 ORTHO05D003642 1.8e-30 136.0 89 74.2
FvH4_5g02350 Fragaria vesca HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
FAN04G0830 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
FAN08G3005 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
FAN13G1971 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
FAN18G2670 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
HanXRQChr06g0165551 Helianthus annuus HOM05D003133 ORTHO05D003642 2.3e-30 135.6 82 79.3
Nn6g33441 Nelumbo nucifera HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
Prupe.5G099700 Prunus persica HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
Sabra03G0090000 Salix brachista HOM05D003133 ORTHO05D003642 2.3e-30 135.6 89 74.2
Atru.chr9.2198 Acer truncatum HOM05D003133 ORTHO05D003642 3.0e-30 135.2 92 72.8
Gorai.006G209400 Gossypium raimondii HOM05D003133 ORTHO05D003642 3.0e-30 135.2 90 75.6
Nn6g33461 Nelumbo nucifera HOM05D003133 ORTHO05D003642 3.0e-30 135.2 89 74.2
Nitab4.5_0003441g0130 Nicotiana tabacum HOM05D003133 ORTHO05D003642 3.9e-30 134.8 89 71.9
Potri.003G126900 Populus trichocarpa HOM05D003133 ORTHO05D003642 3.9e-30 134.8 89 74.2
PGR031G1439 Punica granatum HOM05D003133 ORTHO05D003642 3.9e-30 134.8 92 71.7
CAN.G774.27 Capsicum annuum HOM05D003133 ORTHO05D003642 5.1e-30 134.4 81 76.5
Migut.A00769 Erythranthe guttata HOM05D003133 ORTHO05D003642 5.1e-30 134.4 89 73.0
Thhalv10024916m.g Eutrema salsugineum HOM05D003133 ORTHO05D003642 5.1e-30 134.4 92 72.8
Oeu011047.1 Olea europaea HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 71.9
Sabra01G0079200 Salix brachista HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 73.0
SalBow8G3631 Salvia bowleyana HOM05D003133 ORTHO05D003642 6.7e-30 134.0 92 71.7
Sp7g21160 Schrenkiella parvula HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 74.2
Solyc08g081010.3 Solanum lycopersicum HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 73.0
THA.LOC104806388 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 74.2
TAR629G0119 Trochodendron aralioides HOM05D003133 ORTHO05D003642 6.7e-30 134.0 89 71.9
Nitab4.5_0010612g0020 Nicotiana tabacum HOM05D003133 ORTHO05D003642 8.8e-30 133.7 89 70.8
Oeu009160.2 Olea europaea HOM05D003133 ORTHO05D003642 8.8e-30 133.7 89 71.9
PGSC0003DMG400012210 Solanum tuberosum HOM05D003133 ORTHO05D003642 8.8e-30 133.7 89 71.9
CSS0049388 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 1.1e-29 133.3 89 73.0
Eucgr.D01848 Eucalyptus grandis HOM05D003133 ORTHO05D003642 1.1e-29 133.3 92 72.8
PSO063G0727 Papaver somniferum HOM05D003133 ORTHO05D003642 1.1e-29 133.3 89 73.0
Sopen08g029330 Solanum pennellii HOM05D003133 ORTHO05D003642 1.1e-29 133.3 89 70.8
TWI15G0789 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 1.1e-29 133.3 89 71.9
MD14G1104000 Malus domestica HOM05D003133 ORTHO05D003642 1.5e-29 132.9 89 73.0
Aa31LG6G5160 Aethionema arabicum HOM05D003133 ORTHO05D003642 1.9e-29 132.5 83 74.7
Sed0025899 Sechium edule HOM05D003133 ORTHO05D003642 1.9e-29 132.5 89 71.9
unitig_88.g27613 Utricularia gibba HOM05D003133 ORTHO05D003642 1.9e-29 132.5 89 70.8
AL7G30380 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 2.5e-29 132.1 92 71.7
AT4G23100 Arabidopsis thaliana HOM05D003133 ORTHO05D003642 2.5e-29 132.1 92 71.7
Duzib084G0978 Durio zibethinus HOM05D003133 ORTHO05D003642 2.5e-29 132.1 89 74.2
THA.LOC104814473 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 2.5e-29 132.1 89 73.0
CARHR230180 Cardamine hirsuta HOM05D003133 ORTHO05D003642 3.3e-29 131.7 89 73.0
ClCG01G002740 Citrullus lanatus HOM05D003133 ORTHO05D003642 3.3e-29 131.7 89 71.9
Lsat_1_v5_gn_1_34361 Lactuca sativa HOM05D003133 ORTHO05D003642 3.3e-29 131.7 89 71.9
PSO017G2538 Papaver somniferum HOM05D003133 ORTHO05D003642 3.3e-29 131.7 89 73.0
Thecc.03G278200 Theobroma cacao HOM05D003133 ORTHO05D003642 3.3e-29 131.7 89 71.9
BcaNung01474 Brassica carinata HOM05D003133 ORTHO05D003642 4.3e-29 131.3 92 72.8
BolC7t45742H Brassica oleracea HOM05D003133 ORTHO05D003642 4.3e-29 131.3 92 72.8
Carub.0007s1815 Capsella rubella HOM05D003133 ORTHO05D003642 4.3e-29 131.3 92 71.7
AUR62003405 Chenopodium quinoa HOM05D003133 ORTHO05D003642 4.3e-29 131.3 103 66.0
Potri.001G104500 Populus trichocarpa HOM05D003133 ORTHO05D003642 4.3e-29 131.3 89 71.9
BcaNung00995 Brassica carinata HOM05D003133 ORTHO05D003642 5.7e-29 131.0 92 71.7
ECA246G1277 Erigeron canadensis HOM05D003133 ORTHO05D003642 5.7e-29 131.0 89 71.9
BcaNung03247 Brassica carinata HOM05D003133 ORTHO05D003642 7.4e-29 130.6 92 71.7
A03p54030 Brassica napus HOM05D003133 ORTHO05D003642 7.4e-29 130.6 92 72.8
BraA03t14471Z Brassica rapa HOM05D003133 ORTHO05D003642 7.4e-29 130.6 92 72.8
SalBow7G4504 Salvia bowleyana HOM05D003133 ORTHO05D003642 7.4e-29 130.6 92 67.4
MELO3C005674.2 Cucumis melo HOM05D003133 ORTHO05D003642 9.7e-29 130.2 89 71.9
C03p84590 Brassica napus HOM05D003133 ORTHO05D003642 1.3e-28 129.8 89 71.9
BolC3t20748H Brassica oleracea HOM05D003133 ORTHO05D003642 1.3e-28 129.8 89 71.9
CsaV3_5G002830 Cucumis sativus L. HOM05D003133 ORTHO05D003642 1.3e-28 129.8 89 71.9
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 1.3e-28 129.8 78 79.5
BcaC09g51026 Brassica carinata HOM05D003133 ORTHO05D003642 1.7e-28 129.4 92 70.7
C01p17720 Brassica napus HOM05D003133 ORTHO05D003642 1.7e-28 129.4 92 70.7
BolC1t01707H Brassica oleracea HOM05D003133 ORTHO05D003642 1.7e-28 129.4 92 70.7
Peaxi162Scf00119g00083 Petunia axillaris HOM05D003133 ORTHO05D003642 2.2e-28 129.0 89 69.7
Cfa012180 Carpinus fangiana HOM05D003133 ORTHO05D003642 2.8e-28 128.6 92 69.6
Cfa012179 Carpinus fangiana HOM05D003133 ORTHO05D003642 3.7e-28 128.3 92 69.6
Hund11475 Selenicereus undatus HOM05D003133 ORTHO05D003642 3.7e-28 128.3 115 60.9
BcaC01g00811 Brassica carinata HOM05D003133 ORTHO05D003642 8.2e-28 127.1 81 75.3
Manes.01G061500 Manihot esculenta HOM05D003133 ORTHO05D003642 8.2e-28 127.1 81 75.3
C07p52450 Brassica napus HOM05D003133 ORTHO05D003642 1.4e-27 126.3 92 71.7
A01p14400 Brassica napus HOM05D003133 ORTHO05D003642 2.4e-27 125.6 92 68.5
BraA01t01385Z Brassica rapa HOM05D003133 ORTHO05D003642 2.4e-27 125.6 92 68.5
HPP92_015162 Vanilla planifolia HOM05D003133 ORTHO05D003642 3.1e-27 125.2 89 71.9
CiPaw.11G135600 Carya illinoinensis HOM05D003133 ORTHO05D003642 5.3e-27 124.4 75 77.3
Zm00001eb264980 Zea mays HOM05D003133 ORTHO05D003642 5.3e-27 124.4 89 67.4
Aqoxy7G00341 Aquilegia oxysepala HOM05D003133 ORTHO05D003642 1.2e-26 123.2 113 58.4
Zm00001eb354890 Zea mays HOM05D003133 ORTHO05D003642 3.4e-26 121.7 89 66.3
AL5G13020 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 7.7e-26 120.6 89 68.5
Haze_08840 Corylus avellana HOM05D003133 ORTHO05D003642 7.7e-26 120.6 80 71.2
Mapoly0043s0124 Marchantia polymorpha HOM05D003133 ORTHO05D003642 7.7e-26 120.6 92 62.0
Pp3c1_34800 Physcomitrium patens HOM05D003133 ORTHO05D003642 7.7e-26 120.6 88 62.5
AL7G30390 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 1.0e-25 120.2 89 68.5
BcaNung03246 Brassica carinata HOM05D003133 ORTHO05D003642 1.0e-25 120.2 89 67.4
Prupe.5G099600 Prunus persica HOM05D003133 ORTHO05D003642 1.0e-25 120.2 89 66.3
BcaB03g11757 Brassica carinata HOM05D003133 ORTHO05D003642 2.9e-25 118.6 95 66.3
CSS0043939 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 5.0e-25 117.9 74 74.3
Carub.0007s2982 Capsella rubella HOM05D003133 ORTHO05D003642 8.5e-25 117.1 89 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1870 Anthoceros agrestis HOM05D003133 ORTHO05D003642 1.1e-24 116.7 82 65.9
C07p52420 Brassica napus HOM05D003133 ORTHO05D003642 1.9e-24 115.9 84 67.9
SMO353G0160 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 1.9e-24 115.9 89 58.4
TAR636G2402 Trochodendron aralioides HOM05D003133 ORTHO05D003642 1.9e-24 115.9 74 74.3
BolC7t45737H Brassica oleracea HOM05D003133 ORTHO05D003642 2.5e-24 115.5 89 65.2
Os05g0129000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 4.2e-24 114.8 89 61.8
Os07g0462000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 4.2e-24 114.8 89 61.8
MD07G1036400 Malus domestica HOM05D003133 ORTHO05D003642 7.2e-24 114.0 81 67.9
BraA03t14470Z Brassica rapa HOM05D003133 ORTHO05D003642 9.4e-24 113.6 89 64.0
Pp3c2_1270 Physcomitrium patens HOM05D003133 ORTHO05D003642 9.4e-24 113.6 88 60.2
BcaNung01476 Brassica carinata HOM05D003133 ORTHO05D003642 2.1e-23 112.5 81 67.9
DCAR_004635 Daucus carota HOM05D003133 ORTHO05D003642 2.7e-23 112.1 89 61.8
A03p54020 Brassica napus HOM05D003133 ORTHO05D003642 4.7e-23 111.3 89 62.9
CBR_g17908 Chara braunii HOM05D003133 ORTHO05D003642 1.0e-22 110.2 89 58.4
Haze_08839 Corylus avellana HOM05D003133 ORTHO05D003642 1.4e-22 109.8 76 69.7
SHI07126 Sapria himalayana HOM05D003133 ORTHO05D003642 1.4e-22 109.8 81 64.2
QL07p017350 Quercus lobata HOM05D003133 ORTHO05D003642 1.5e-21 106.3 92 58.7
MBI18_g34593_MAGBIO Magnolia biondii HOM05D003133 ORTHO05D003642 2.6e-21 105.5 89 64.0
SMO143G0252 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 2.4e-19 99.0 89 52.8
LjContig00312_ERROPOS870357g0003358 Lotus japonicus HOM05D003133 ORTHO05D003642 3.1e-19 98.6 82 59.8
arahy.Tifrunner.gnm1.ann1.Y73929 Arachis hypogaea HOM05D003133 ORTHO05D003642 9.1e-19 97.1 82 58.5
Medtr5g010250 Medicago truncatula HOM05D003133 ORTHO05D003642 1.2e-18 96.7 92 55.4
Ca_24552_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 5.9e-18 94.4 82 57.3
Rhsim02G0229900 Rhododendron simsii HOM05D003133 ORTHO05D003642 1.0e-17 93.6 61 73.8
Glyma.01G219900 Glycine max HOM05D003133 ORTHO05D003642 5.0e-17 91.3 92 55.4
Medtr5g010230 Medicago truncatula HOM05D003133 ORTHO05D003642 6.5e-17 90.9 92 54.3
Phvul.002G157600 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 8.5e-17 90.5 86 54.7
Pp3c22_12540 Physcomitrium patens HOM05D003133 ORTHO05D003642 8.5e-17 90.5 82 52.4
vmacro11331 Vaccinium macrocarpon HOM05D003133 ORTHO05D003642 8.5e-17 90.5 58 72.4
TWI81G0564 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 1.1e-16 90.1 52 78.8
Cre02.g077100 Chlamydomonas reinhardtii HOM05D003133 ORTHO05D003642 4.7e-15 84.7 89 43.8
VMungo1215G2488 Vigna mungo HOM05D003133 ORTHO05D003642 6.1e-15 84.3 86 51.2
CDE09G0774 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.8e-14 82.8 58 67.2
CDE11G0240 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.8e-14 82.8 89 52.8
MCO14G076 Micromonas commoda HOM05D003133 ORTHO05D003642 2.3e-14 82.4 86 46.5
Rhsim02G0230100 Rhododendron simsii HOM05D003133 ORTHO05D003642 3.9e-14 81.6 51 74.5
PRCOL_00004592 Prasinoderma coloniale HOM05D003133 ORTHO05D003642 2.6e-13 79.0 81 45.7
Lalb_Chr09g0321001 Lupinus albus HOM05D003133 ORTHO05D003642 1.3e-12 76.6 77 50.6
TPR.G6641 Trifolium pratense HOM05D003133 ORTHO05D003642 1.4e-11 73.2 61 59.0
QL04p021333 Quercus lobata HOM05D003977 ORTHO05D004536 1.7e-09 66.2 63 52.4
QL07p029554 Quercus lobata HOM05D003133 ORTHO05D003642 5.0e-09 64.7 62 53.2
TWI81G1077 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 3.0e-06 55.5 32 81.2
Rhsim02G0230000 Rhododendron simsii HOM05D003133 ORTHO05D003642 6.7e-06 54.3 34 76.5


User provided reference genes

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