Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32140 Sequoiadendron giganteum HOM05D035610 ORTHO05D003437 8.5e-184 647.1 391 100.0
SEGI_39261 Sequoiadendron giganteum HOM05D003097 ORTHO05D003437 4.7e-81 305.8 207 98.1
SEGI_34539 Sequoiadendron giganteum HOM05D035610 ORTHO05D386401 2.1e-49 200.7 105 100.0
ATR1134G035 Amborella trichopoda HOM05D003097 ORTHO05D003437 5.2e-32 142.9 374 40.1
Mapoly0025s0044 Marchantia polymorpha HOM05D003097 ORTHO05D003437 1.9e-29 134.4 360 41.7
Pp3c11_23000 Physcomitrium patens HOM05D003097 ORTHO05D003437 3.9e-19 100.1 209 49.8
AagrBONN_evm.TU.Sc2ySwM_117.3067 Anthoceros agrestis HOM05D035610 ORTHO05D003437 2.0e-15 87.8 233 32.2
Pp3c7_3790 Physcomitrium patens HOM05D003097 ORTHO05D003437 5.8e-15 86.3 212 50.0
CiPaw.08G131400 Carya illinoinensis HOM05D003097 ORTHO05D003437 1.3e-14 85.1 190 52.6
ATR0810G161 Amborella trichopoda HOM05D003097 ORTHO05D003437 2.4e-13 80.9 222 44.6
Dinv33630 Davidia involucrata HOM05D003097 ORTHO05D003437 7.1e-13 79.3 187 39.0
Aqoxy6G02341 Aquilegia oxysepala HOM05D003097 ORTHO05D003437 2.7e-12 77.4 190 45.3
TWI53G0815 Tripterygium wilfordii HOM05D003097 ORTHO05D003437 2.3e-11 74.3 187 52.9
Nn5g29092 Nelumbo nucifera HOM05D003097 ORTHO05D003437 3.9e-11 73.6 262 39.7
Dinv40090 Davidia involucrata HOM05D003097 ORTHO05D003437 6.6e-11 72.8 280 36.4
QL06p032886 Quercus lobata HOM05D003097 ORTHO05D003437 1.1e-10 72.0 275 40.0
Hund14046 Selenicereus undatus HOM05D003097 ORTHO05D003437 1.1e-10 72.0 187 45.5
arahy.Tifrunner.gnm1.ann1.4M6RGX Arachis hypogaea HOM05D003097 ORTHO05D003437 2.5e-10 70.9 188 45.7
arahy.Tifrunner.gnm1.ann1.WD5AW4 Arachis hypogaea HOM05D003097 ORTHO05D003437 2.5e-10 70.9 188 45.7
GSVIVG01018777001 Vitis vinifera HOM05D003097 ORTHO05D003437 2.5e-10 70.9 187 42.2
Prupe.7G168500 Prunus persica HOM05D003097 ORTHO05D003437 4.3e-10 70.1 187 46.5
Manes.05G200500 Manihot esculenta HOM05D003097 ORTHO05D003437 9.6e-10 68.9 225 39.6
Thecc.01G018200 Theobroma cacao HOM05D003097 ORTHO05D003437 1.6e-09 68.2 187 43.9
Atru.chr5.3226 Acer truncatum HOM05D003097 ORTHO05D003437 2.8e-09 67.4 278 38.1
FAN26G3019 Fragaria x ananassa HOM05D003097 ORTHO05D003437 2.8e-09 67.4 184 48.9
Gohir.A03G203100 Gossypium hirsutum HOM05D003097 ORTHO05D003437 2.8e-09 67.4 188 40.4
Gohir.D02G224400 Gossypium hirsutum HOM05D003097 ORTHO05D003437 2.8e-09 67.4 188 40.4
Nitab4.5_0000128g0360 Nicotiana tabacum HOM05D003097 ORTHO05D003437 2.8e-09 67.4 189 51.3
QL11p047530 Quercus lobata HOM05D003097 ORTHO05D003437 2.8e-09 67.4 189 40.2
MD02G1132000 Malus domestica HOM05D003097 ORTHO05D003437 3.6e-09 67.0 262 38.2
GSVIVG01024084001 Vitis vinifera HOM05D003097 ORTHO05D003437 3.6e-09 67.0 192 49.0
COL.COLO4_21904 Corchorus olitorius HOM05D003097 ORTHO05D003437 6.2e-09 66.2 187 47.6
FAN23G2650 Fragaria x ananassa HOM05D003097 ORTHO05D003437 1.4e-08 65.1 184 41.3
RcHm_v2.0_Chr2g0099391 Rosa chinensis HOM05D003097 ORTHO05D003437 1.4e-08 65.1 187 38.5
Glyma.07G171600 Glycine max HOM05D003097 ORTHO05D003437 1.8e-08 64.7 187 40.6
Cfa006975 Carpinus fangiana HOM05D003097 ORTHO05D003437 2.4e-08 64.3 275 38.5
vmacro22134 Vaccinium macrocarpon HOM05D003097 ORTHO05D003437 2.4e-08 64.3 187 50.8
CANSAT25G1721 Cannabis sativa HOM05D003097 ORTHO05D003437 3.1e-08 63.9 279 38.0
MBI09_g12954_MAGBIO Magnolia biondii HOM05D003097 ORTHO05D003437 5.3e-08 63.2 188 43.6
FAN28G2069 Fragaria x ananassa HOM05D003097 ORTHO05D003437 6.9e-08 62.8 184 48.9
Glyma.08G148500 Glycine max HOM05D003097 ORTHO05D003437 6.9e-08 62.8 245 39.6
Gorai.005G252200 Gossypium raimondii HOM05D003097 ORTHO05D003437 6.9e-08 62.8 189 27.5
Rhsim10G0211800 Rhododendron simsii HOM05D003097 ORTHO05D003437 6.9e-08 62.8 187 50.3
CSS0021352 Camellia sinensis var. sinensis HOM05D003097 ORTHO05D003437 9.0e-08 62.4 188 48.9
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 9.0e-08 62.4 333 35.1
Nitab4.5_0007006g0010 Nicotiana tabacum HOM05D003097 ORTHO05D003437 9.0e-08 62.4 189 50.3
Potri.004G168100 Populus trichocarpa HOM05D003097 ORTHO05D003437 9.0e-08 62.4 208 40.4
Lj3g0016767 Lotus japonicus HOM05D003097 ORTHO05D003437 1.2e-07 62.0 188 42.0
CiPaw.06G125400 Carya illinoinensis HOM05D003097 ORTHO05D003437 1.5e-07 61.6 188 47.3
AUR62003365 Chenopodium quinoa HOM05D003097 ORTHO05D003437 1.5e-07 61.6 171 50.9
PSO541G5166 Papaver somniferum HOM05D003097 ORTHO05D003437 2.0e-07 61.2 189 43.9
PSO675G5479 Papaver somniferum HOM05D003097 ORTHO05D003437 2.0e-07 61.2 193 44.0
Sabra09G0099100 Salix brachista HOM05D003097 ORTHO05D003437 2.0e-07 61.2 189 35.4
AUR62029468 Chenopodium quinoa HOM05D003097 ORTHO05D003437 2.6e-07 60.8 276 38.8
Sc03g0003590 Simmondsia chinensis HOM05D003097 ORTHO05D003437 2.6e-07 60.8 188 45.7
Actinidia22974 Actinidia chinensis HOM05D003097 ORTHO05D003437 3.4e-07 60.5 241 39.0
MELO3C007905.2 Cucumis melo HOM05D003097 ORTHO05D003437 5.8e-07 59.7 187 44.4
Thhalv10023630m.g Eutrema salsugineum HOM05D003097 ORTHO05D003437 7.6e-07 59.3 188 45.7
Ah.03g148800 Amaranthus hybridus HOM05D003097 ORTHO05D003437 9.9e-07 58.9 190 45.3
Cfa005183 Carpinus fangiana HOM05D003097 ORTHO05D003437 9.9e-07 58.9 189 38.6
CsaV3_6G047120 Cucumis sativus L. HOM05D003097 ORTHO05D003437 9.9e-07 58.9 187 44.9
FAN15G0773 Fragaria x ananassa HOM05D003097 ORTHO05D003437 9.9e-07 58.9 223 42.6
FAN19G0902 Fragaria x ananassa HOM05D003097 ORTHO05D003437 9.9e-07 58.9 265 39.6
Lj2A468T74 Lonicera japonica HOM05D003097 ORTHO05D003437 9.9e-07 58.9 188 43.1
PGR119G0495 Punica granatum HOM05D003097 ORTHO05D003437 9.9e-07 58.9 186 49.5
FvH4_1g11770 Fragaria vesca HOM05D003097 ORTHO05D003437 1.3e-06 58.5 264 39.0
Hma1.2p1_0956F.1_g241270 Hydrangea macrophylla HOM05D003097 ORTHO05D003437 1.3e-06 58.5 184 44.0
ClCG01G020320 Citrullus lanatus HOM05D003097 ORTHO05D003437 2.2e-06 57.8 187 44.4
Thecc.02G067000 Theobroma cacao HOM05D003097 ORTHO05D003437 2.2e-06 57.8 280 34.6
Duzib248G0851 Durio zibethinus HOM05D003097 ORTHO05D003437 4.9e-06 56.6 279 27.6
Eucgr.G01757 Eucalyptus grandis HOM05D003097 ORTHO05D003437 4.9e-06 56.6 249 42.2
MD15G1245200 Malus domestica HOM05D003097 ORTHO05D003437 4.9e-06 56.6 188 40.4
Phvul.011G178100 Phaseolus vulgaris HOM05D003097 ORTHO05D003437 4.9e-06 56.6 266 33.8
HPP92_027730 Vanilla planifolia HOM05D003097 ORTHO05D003437 4.9e-06 56.6 191 40.3
CANSAT01G2970 Cannabis sativa HOM05D003097 ORTHO05D003437 6.4e-06 56.2 186 37.1
VMungo1127G0811 Vigna mungo HOM05D003097 ORTHO05D003437 6.4e-06 56.2 271 36.9
DCAR_022957 Daucus carota HOM05D003097 ORTHO05D003437 8.4e-06 55.8 273 33.0
Sp3g17880 Schrenkiella parvula HOM05D003097 ORTHO05D003437 8.4e-06 55.8 188 48.9


User provided reference genes

Program Settings