Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.6e-103 379.4 188 100.0
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.5e-40 170.2 96 90.6
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 7.3e-32 141.4 103 69.9
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 3.1e-30 136.0 185 45.4
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 5.2e-30 135.2 96 69.8
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 5.2e-30 135.2 93 72.0
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 6.8e-30 134.8 185 45.4
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 6.8e-30 134.8 112 63.4
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 6.8e-30 134.8 103 67.0
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 6.8e-30 134.8 175 46.3
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 8.9e-30 134.4 124 58.9
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 8.9e-30 134.4 113 60.2
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.2e-29 134.0 93 71.0
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 1.2e-29 134.0 113 62.8
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 1.5e-29 133.7 103 65.0
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 1.5e-29 133.7 185 43.8
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.5e-29 133.7 124 58.1
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.5e-29 133.7 93 69.9
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 2.0e-29 133.3 185 43.2
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 2.0e-29 133.3 117 59.8
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.0e-29 133.3 96 68.8
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 2.0e-29 133.3 113 63.7
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 2.0e-29 133.3 174 45.4
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 2.0e-29 133.3 92 70.7
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 2.0e-29 133.3 92 70.7
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 2.0e-29 133.3 94 72.3
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 3.4e-29 132.5 113 61.1
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 3.4e-29 132.5 185 42.7
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 3.4e-29 132.5 114 60.5
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 4.4e-29 132.1 113 61.1
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 4.4e-29 132.1 113 61.9
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 4.4e-29 132.1 124 58.1
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 4.4e-29 132.1 174 45.4
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 7.6e-29 131.3 96 67.7
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 7.6e-29 131.3 92 70.7
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 7.6e-29 131.3 113 61.9
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 7.6e-29 131.3 117 59.0
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 9.9e-29 131.0 117 59.0
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.9e-29 131.0 117 59.8
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 9.9e-29 131.0 174 46.0
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 9.9e-29 131.0 104 64.4
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 9.9e-29 131.0 113 61.1
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.3e-28 130.6 113 61.1
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 1.3e-28 130.6 113 61.1
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.3e-28 130.6 113 61.1
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 1.7e-28 130.2 117 58.1
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.7e-28 130.2 78 82.1
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 2.2e-28 129.8 96 65.6
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.2e-28 129.8 113 60.2
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.2e-28 129.8 104 63.5
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 2.9e-28 129.4 92 69.6
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 2.9e-28 129.4 179 44.7
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 2.9e-28 129.4 116 56.9
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 3.8e-28 129.0 112 58.0
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 4.9e-28 128.6 79 75.9
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 4.9e-28 128.6 113 60.2
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 4.9e-28 128.6 113 58.4
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 6.4e-28 128.3 92 69.6
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 6.4e-28 128.3 113 59.3
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 6.4e-28 128.3 113 59.3
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 6.4e-28 128.3 113 59.3
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 6.4e-28 128.3 92 68.5
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 8.4e-28 127.9 90 70.0
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 1.1e-27 127.5 80 75.0
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 1.4e-27 127.1 92 67.4
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.9e-27 126.7 92 67.4
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 1.9e-27 126.7 90 67.8
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.2e-27 125.9 103 62.1
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.2e-27 125.9 103 62.1
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 3.2e-27 125.9 115 57.4
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 4.1e-27 125.6 119 57.1
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 5.4e-27 125.2 98 67.3
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 7.1e-27 124.8 113 56.6
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 7.1e-27 124.8 113 58.4
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 7.1e-27 124.8 117 58.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 7.1e-27 124.8 93 65.6
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 9.2e-27 124.4 113 57.5
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.2e-26 124.0 113 57.5
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 1.2e-26 124.0 113 57.5
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.6e-26 123.6 113 56.6
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.6e-26 123.6 113 56.6
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 1.6e-26 123.6 96 63.5
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.1e-26 123.2 113 56.6
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 2.7e-26 122.9 113 56.6
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 2.7e-26 122.9 117 56.4
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 3.5e-26 122.5 82 74.4
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 6.0e-26 121.7 117 56.4
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 7.8e-26 121.3 127 51.2
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 7.8e-26 121.3 127 51.2
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.7e-25 120.2 127 54.3
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 2.3e-25 119.8 135 51.9
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 3.9e-25 119.0 80 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 5.1e-25 118.6 92 65.2
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.1e-24 117.5 138 49.3
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 3.1e-22 109.4 65 75.4
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 4.9e-20 102.1 127 46.5
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 3.2e-19 99.4 125 46.4
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 1.6e-18 97.1 75 62.7
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.7e-18 96.3 66 60.6
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 7.3e-16 88.2 63 68.3
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.1e-14 84.3 66 65.2
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 5.8e-13 78.6 82 51.2
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 2.1e-07 60.1 49 57.1
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 6.9e-06 55.1 47 55.3


User provided reference genes

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