Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31724 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 0.0e+00 2711.0 1374 100.0
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 0.0e+00 1275.4 1188 54.0
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 0.0e+00 1248.8 1175 54.2
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 0.0e+00 1231.1 1186 53.0
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 0.0e+00 1229.2 1183 53.3
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 0.0e+00 1198.7 1188 50.8
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 0.0e+00 1192.2 1187 51.3
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 0.0e+00 1192.2 1188 51.6
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 0.0e+00 1186.4 1191 51.6
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 0.0e+00 1184.1 1186 50.8
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 0.0e+00 1182.9 1185 50.4
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 0.0e+00 1179.5 1185 50.6
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1174.1 1188 50.4
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1173.7 1186 50.5
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 0.0e+00 1171.8 1188 50.3
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1171.4 1188 50.3
Peaxi162Scf00363g00321 Petunia axillaris HOM05D003919 ORTHO05D004906 0.0e+00 1165.2 1188 50.0
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 0.0e+00 1164.8 1198 48.8
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 0.0e+00 1163.7 1189 50.2
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 0.0e+00 1162.9 1185 50.3
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 0.0e+00 1162.5 1194 49.6
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 0.0e+00 1162.5 1185 49.1
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 0.0e+00 1161.7 1193 50.6
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 0.0e+00 1161.0 1186 50.2
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 0.0e+00 1160.6 1189 50.3
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 0.0e+00 1155.6 1189 50.0
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 0.0e+00 1153.3 1208 49.7
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 0.0e+00 1151.3 1184 48.8
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 0.0e+00 1151.0 1185 49.5
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 0.0e+00 1151.0 1199 49.4
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 0.0e+00 1150.6 1186 49.5
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 0.0e+00 1150.6 1188 49.8
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 0.0e+00 1149.8 1187 49.5
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 0.0e+00 1148.7 1195 49.7
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1148.3 1190 49.8
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1146.3 1192 49.2
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 0.0e+00 1146.0 1193 49.4
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 0.0e+00 1141.3 1199 49.4
Ca_30179_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 0.0e+00 1140.6 1167 49.6
Os04g0675200 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 0.0e+00 1139.8 1180 50.2
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 0.0e+00 1139.4 1184 49.7
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 0.0e+00 1139.4 1187 49.5
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 0.0e+00 1138.3 1183 49.7
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1135.2 1186 48.3
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1134.0 1188 48.1
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 0.0e+00 1132.9 1188 49.3
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1132.5 1195 48.4
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 0.0e+00 1131.7 1183 48.6
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1129.8 1188 48.0
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1129.0 1192 47.7
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1128.6 1193 48.5
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 0.0e+00 1120.1 1184 48.1
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 0.0e+00 1120.1 1183 49.5
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 0.0e+00 1117.8 1187 47.3
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 0.0e+00 1115.5 1187 48.8
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 0.0e+00 1114.0 1183 48.2
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 0.0e+00 1113.2 1183 48.3
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 0.0e+00 1109.7 1197 48.0
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 0.0e+00 1106.3 1184 48.0
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 0.0e+00 1104.7 1185 47.9
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 0.0e+00 1096.3 1178 48.1
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 0.0e+00 1095.5 1185 47.9
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1093.6 1183 48.2
Oeu055858.1 Olea europaea HOM05D003919 ORTHO05D004906 0.0e+00 1087.0 1144 48.0
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 0.0e+00 1080.9 1178 47.7
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 0.0e+00 1079.3 1185 47.1
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 0.0e+00 1077.8 1166 47.3
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 0.0e+00 1075.5 1180 46.9
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 0.0e+00 1075.1 1178 47.6
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 9.4e-312 1073.9 1178 47.5
Solyc02g014180.2 Solanum lycopersicum HOM05D003919 ORTHO05D004906 9.4e-312 1073.9 1121 49.2
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 1.9e-310 1069.7 1205 46.6
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 2.3e-308 1062.8 1204 46.1
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 5.6e-307 1058.1 1170 46.7
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 4.8e-306 1055.0 1201 46.0
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 1.1e-302 1043.9 1181 45.7
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 6.7e-300 1034.6 1183 45.5
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 4.0e-297 1025.4 1181 45.1
Nitab4.5_0023098g0010 Nicotiana tabacum HOM05D003919 ORTHO05D004906 7.6e-296 1021.1 1098 48.0
Gohir.A12G133900 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.1e-293 1013.1 1068 48.9
Ah.01g012290 Amaranthus hybridus HOM05D003919 ORTHO05D004906 6.0e-293 1011.5 1101 46.1
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.8e-292 1010.0 1190 44.6
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 5.1e-292 1008.4 1100 47.3
Dinv01184 Davidia involucrata HOM05D003919 ORTHO05D004906 6.1e-285 984.9 1097 47.1
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 6.9e-281 971.5 1199 43.5
Cpa.g.sc0.152 Carica papaya HOM05D003919 ORTHO05D004906 1.7e-279 966.8 1056 47.5
Lj6P719T30 Lonicera japonica HOM05D003919 ORTHO05D004906 1.8e-265 920.2 951 49.5
CDE08G1346 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.2e-261 907.5 1184 41.6
HPP92_012877 Vanilla planifolia HOM05D003919 ORTHO05D004906 4.7e-253 879.0 1180 42.1
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 1.6e-205 721.1 1180 36.4
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 6.6e-199 699.1 1179 37.7
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 2.8e-181 640.6 1177 34.8
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 5.4e-76 290.8 279 49.8
ECA233G4021 Erigeron canadensis HOM05D003919 ORTHO05D004906 2.1e-75 288.9 335 47.2
GSVIVG01028587001 Vitis vinifera HOM05D003919 ORTHO05D004906 3.7e-72 278.1 320 46.6
ECA233G5658 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.3e-69 269.6 293 48.1
ECA233G5805 Erigeron canadensis HOM05D003919 ORTHO05D004906 3.2e-68 265.0 287 50.2
HanXRQChr08g0218771 Helianthus annuus HOM05D003919 ORTHO05D004906 4.2e-68 264.6 294 48.0
ECA233G3594 Erigeron canadensis HOM05D003919 ORTHO05D004906 9.3e-68 263.5 293 48.8
HanXRQChr08g0218781 Helianthus annuus HOM05D003919 ORTHO05D004906 1.6e-64 252.7 291 47.4
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 2.1e-64 252.3 1323 23.7
ECA233G4978 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.9e-59 233.8 253 47.8
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.7e-32 146.4 330 31.5
Cpa.g.sc0.154 Carica papaya HOM05D003919 ORTHO05D043505 1.3e-24 120.2 97 58.8
Nitab4.5_0003853g0040 Nicotiana tabacum HOM05D003919 ORTHO05D043505 6.3e-24 117.9 90 61.1
ECA233G0722 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-23 115.2 131 42.7
SEGI_30204 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 1.7e-13 83.2 37 97.3
SEGI_13273 Sequoiadendron giganteum HOM05D000244 ORTHO05D000179 6.1e-11 74.7 54 70.4
SEGI_24828 Sequoiadendron giganteum HOM05D000991 ORTHO05D000848 2.0e-09 69.7 45 75.6
SEGI_05120 Sequoiadendron giganteum HOM05D000038 ORTHO05D000612 7.5e-09 67.8 36 83.3
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 2.2e-08 66.2 410 22.7
SGA_v2.0_scaffold2647G54168 Striga asiatica HOM05D003919 ORTHO05D004906 4.1e-07 62.0 54 48.1
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 9.2e-07 60.8 398 24.4


User provided reference genes

Program Settings