Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 3.3e-101 371.7 184 100.0
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 9.6e-61 237.3 168 67.9
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 3.6e-60 235.3 159 69.2
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 8.1e-60 234.2 160 69.4
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 4.0e-59 231.9 160 66.9
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 5.3e-59 231.5 168 64.9
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 5.3e-59 231.5 160 68.8
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 6.9e-59 231.1 160 68.8
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 1.5e-58 229.9 160 67.5
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 3.4e-58 228.8 160 69.4
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 5.8e-58 228.0 160 68.1
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 5.8e-58 228.0 168 64.9
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 1.3e-57 226.9 160 66.9
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 1.7e-57 226.5 160 66.9
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 1.7e-57 226.5 160 66.9
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 1.7e-57 226.5 160 68.1
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.7e-57 226.5 160 68.1
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 2.2e-57 226.1 160 68.1
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 2.2e-57 226.1 160 67.5
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 2.2e-57 226.1 160 67.5
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 2.9e-57 225.7 160 68.8
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 2.9e-57 225.7 160 66.9
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 1.1e-56 223.8 160 66.2
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 1.4e-56 223.4 160 68.1
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 1.9e-56 223.0 160 66.2
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 2.4e-56 222.6 160 67.5
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 2.4e-56 222.6 160 66.9
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 4.2e-56 221.9 166 64.5
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 5.4e-56 221.5 160 65.6
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 9.3e-56 220.7 160 65.6
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 9.3e-56 220.7 160 65.6
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.2e-55 220.3 160 66.2
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 1.6e-55 219.9 160 65.6
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 2.7e-55 219.2 166 62.7
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 2.7e-55 219.2 160 64.4
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.5e-55 218.8 160 64.4
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.5e-55 218.8 160 64.4
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 3.5e-55 218.8 160 66.2
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 3.5e-55 218.8 160 66.2
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 3.5e-55 218.8 160 65.0
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 4.6e-55 218.4 160 64.4
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 4.6e-55 218.4 160 65.6
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 4.6e-55 218.4 168 62.5
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 4.6e-55 218.4 168 61.3
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 6.0e-55 218.0 160 62.5
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.0e-54 217.2 168 62.5
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.0e-54 217.2 162 63.6
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.3e-54 216.9 160 65.6
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 1.3e-54 216.9 166 64.5
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 2.3e-54 216.1 160 63.8
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 2.3e-54 216.1 160 63.8
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 3.9e-54 215.3 160 64.4
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.9e-54 215.3 160 65.6
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 5.1e-54 214.9 168 61.9
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 5.1e-54 214.9 160 65.0
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 6.6e-54 214.5 160 62.5
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 8.7e-54 214.2 160 63.8
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 8.7e-54 214.2 166 64.5
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 1.1e-53 213.8 159 63.5
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 1.5e-53 213.4 160 64.4
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 1.9e-53 213.0 160 64.4
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 3.3e-53 212.2 160 63.8
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 3.3e-53 212.2 160 63.8
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 3.3e-53 212.2 160 63.1
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 4.3e-53 211.8 160 63.8
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 5.6e-53 211.5 160 63.1
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 7.3e-53 211.1 160 61.9
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 7.3e-53 211.1 160 63.8
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 7.3e-53 211.1 160 63.1
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 9.6e-53 210.7 169 60.9
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 9.6e-53 210.7 160 63.1
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.1e-52 209.5 160 63.1
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 2.8e-52 209.1 160 61.9
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 2.8e-52 209.1 160 61.9
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 3.6e-52 208.8 166 59.6
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 4.8e-52 208.4 160 63.8
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 8.1e-52 207.6 167 56.9
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 1.1e-51 207.2 159 62.9
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.2e-50 203.8 140 67.1
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 2.6e-50 202.6 159 60.4
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.4e-50 202.2 168 60.1
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.1e-45 187.2 140 61.4
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.5e-45 186.8 160 57.5
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 1.9e-45 186.4 164 53.0
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 9.6e-45 184.1 170 54.1
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 1.8e-43 179.9 130 68.5
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 3.1e-43 179.1 130 66.2
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.9e-41 172.6 130 63.1
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 8.7e-38 161.0 165 49.7
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 7.4e-37 157.9 144 56.2
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 4.8e-36 155.2 142 51.4
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 6.9e-35 151.4 101 76.2
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 3.4e-34 149.1 160 48.8
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 6.5e-33 144.8 128 55.5
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 1.9e-32 143.3 102 68.6
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 1.0e-30 137.5 173 42.2
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 2.3e-30 136.3 84 79.8
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 2.9e-25 119.4 100 51.0
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 1.2e-23 114.0 159 39.6
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 3.7e-20 102.4 70 70.0
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.5e-18 97.1 106 50.0
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 2.0e-18 96.7 70 67.1
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.9e-17 92.8 138 42.8
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 1.4e-16 90.5 160 36.9
LjContig00564g0015808 Lotus japonicus HOM05D002380 ORTHO05D008286 1.1e-13 80.9 62 54.8
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 9.7e-13 77.8 168 31.5


User provided reference genes

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